RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 SYDE1Q6ZW31 735 aaPredicted RBP3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 SHISA4Q96DD7 197 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 PLCD4Q9BRC7 762 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 KIAA1522Q9P206 1035 aaPredicted RBP3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 KIF15Q9NS87 1388 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 CLEC3AO75596 197 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 NME1P15531 152 aaKnown RBP3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 SPOCD1Q6ZMY3 1216 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 SLITRK4Q8IW52 837 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 USHBP1Q8N6Y0 703 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 MYOCOSA0A1B0GUC4 107 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 CEBPAP49715 358 aaPredicted RBP3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 LCNL1Q6ZST4 164 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 WAPLQ7Z5K2 1190 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 METTL16Q86W50 562 aaKnown RBP3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 NKD1Q969G9 470 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 IPO9Q96P70 1041 aaKnown RBP3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 GPR160Q9UJ42 338 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 ZNRF3Q9ULT6 936 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 KIF13BQ9NQT8 1826 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 RGPD2P0DJD1 1756 aa3.4□□□□□ -1.86
CDC42EP3-205ENST00000494083 RAC2P15153 192 aa3.4□□□□□ -1.86
CDC42EP3-205ENST00000494083 ZNF605Q86T29 641 aa3.4□□□□□ -1.86
CDC42EP3-205ENST00000494083 LINC01599Q8WXQ3 324 aa3.4□□□□□ -1.86
CDC42EP3-205ENST00000494083 HHIPL1Q96JK4 782 aa3.4□□□□□ -1.86
CDC42EP3-205ENST00000494083 NT5C1AQ9BXI3 368 aa3.4□□□□□ -1.86
CDC42EP3-205ENST00000494083 DCP1AQ9NPI6 582 aaPredicted RBP3.4□□□□□ -1.86
CDC42EP3-205ENST00000494083 PRDM4Q9UKN5 801 aa3.4□□□□□ -1.86
CDC42EP3-205ENST00000494083 NUDCQ9Y266 331 aa3.4□□□□□ -1.86
CDC42EP3-205ENST00000494083 USP47Q96K76 1375 aa3.4□□□□□ -1.87
CDC42EP3-205ENST00000494083 MEIS3P2A8K0S8 358 aa3.4□□□□□ -1.87
CDC42EP3-205ENST00000494083 PDZD8Q8NEN9 1154 aa3.4□□□□□ -1.87
CDC42EP3-205ENST00000494083 BRF1Q92994 677 aa3.4□□□□□ -1.87
CDC42EP3-205ENST00000494083 CHD4Q14839 1912 aa3.4□□□□□ -1.87
CDC42EP3-205ENST00000494083 AGLP35573 1532 aa3.4□□□□□ -1.87
CDC42EP3-205ENST00000494083 ZNF646O15015 1829 aaPredicted RBP3.4□□□□□ -1.87
CDC42EP3-205ENST00000494083 ETV2O00321 342 aaPredicted RBP3.4□□□□□ -1.87
CDC42EP3-205ENST00000494083 TP53P04637 393 aaPredicted RBP3.4□□□□□ -1.87
CDC42EP3-205ENST00000494083 SYPP08247 313 aa3.4□□□□□ -1.87
CDC42EP3-205ENST00000494083 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.4□□□□□ -1.87
CDC42EP3-205ENST00000494083 AP5S1Q9NUS5 200 aa3.4□□□□□ -1.87
CDC42EP3-205ENST00000494083 PCDHB10Q9UN67 800 aa3.4□□□□□ -1.87
CDC42EP3-205ENST00000494083 ZNF281Q9Y2X9 895 aa3.4□□□□□ -1.87
CDC42EP3-205ENST00000494083 NCAPD2Q15021 1401 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 SLX4Q8IY92 1834 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 ABCA3Q99758 1704 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 TSPAN15O95858 294 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 AXDND1Q5T1B0 1012 aaPredicted RBP3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 CEP128Q6ZU80 1094 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 REXO1Q8N1G1 1221 aaKnown RBP3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 FAM84AQ96KN4 292 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 DDX41Q9UJV9 622 aaKnown RBP3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 PLA2G2DQ9UNK4 145 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 RGS12O14924 1447 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 DISP3Q9P2K9 1392 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 TNFRSF10CO14798 259 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 CFPP27918 469 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 ZNF165P49910 485 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 PAK2Q13177 524 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 PKN1Q16512 942 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 ADGRF1Q5T601 910 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 NT5DC4Q86YG4 428 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 C1QL4Q86Z23 238 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 SYTL5Q8TDW5 730 aaPredicted RBP3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 FERD3LQ96RJ6 166 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 EPB41L4BQ9H329 900 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 LTN1O94822 1766 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 PNPLA6Q8IY17 1366 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 DBX1A6NMT0 343 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 H0Y8X5 98 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 SIGLEC6O43699 453 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 MLECQ14165 292 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 LSRQ86X29 649 aaPredicted RBP3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 MRRFQ96E11 262 aaKnown RBP3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 INTS4Q96HW7 963 aaKnown RBP3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 GINM1Q9NU53 330 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 ERVK13-1Q9NX77 482 aa3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 GPR55Q9Y2T6 319 aaPredicted RBP3.39□□□□□ -1.87
CDC42EP3-205ENST00000494083 ZNF831Q5JPB2 1677 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 CPSF1Q10570 1443 aaKnown RBP3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 PTCH1Q13635 1447 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 PRG4Q92954 1404 aaPredicted RBP3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 ROBO2Q9HCK4 1378 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 MYO5AQ9Y4I1 1855 aaKnown RBP3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 NPIPB6E9PJ23 425 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 CBFA2T2O43439 604 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 HSPA5P11021 654 aaKnown RBP3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 CHMP4BP1P59074 171 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 AUHQ13825 339 aaKnown RBP3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 FAM43AQ8N2R8 423 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 MAP6Q96JE9 813 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 CDADC1Q9BWV3 514 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 MCOLN1Q9GZU1 580 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 LTBP3Q9NS15 1303 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 ROBO1Q9Y6N7 1651 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 TERF1P54274 439 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 HDLBPQ00341 1268 aaKnown RBP3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 ATG14Q6ZNE5 492 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 ZNF655Q8N720 491 aaPredicted RBP3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 ADCY4Q8NFM4 1077 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms