RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ARHGAP4P98171 946 aa12.98□□□□□ -0.33
MCF2L-231ENST00000494043 ORC2Q13416 577 aaPredicted RBP12.98□□□□□ -0.33
MCF2L-231ENST00000494043 SLC39A14Q15043 492 aa12.98□□□□□ -0.33
MCF2L-231ENST00000494043 ZNF174Q15697 407 aa12.98□□□□□ -0.33
MCF2L-231ENST00000494043 LETM2Q2VYF4 491 aa12.98□□□□□ -0.33
MCF2L-231ENST00000494043 KCNG4Q8TDN1 519 aa12.98□□□□□ -0.33
MCF2L-231ENST00000494043 NAP1L4Q99733 375 aaKnown RBP12.98□□□□□ -0.33
MCF2L-231ENST00000494043 ZFYVE28Q9HCC9 887 aa12.98□□□□□ -0.33
MCF2L-231ENST00000494043 MORC2Q9Y6X9 1032 aaPredicted RBP12.98□□□□□ -0.33
MCF2L-231ENST00000494043 SPTLC2O15270 562 aa12.97□□□□□ -0.33
MCF2L-231ENST00000494043 CCNT1O60563 726 aaKnown RBP12.97□□□□□ -0.33
MCF2L-231ENST00000494043 TLR2O60603 784 aa12.97□□□□□ -0.33
MCF2L-231ENST00000494043 PRPF40AO75400 957 aaKnown RBP12.97□□□□□ -0.33
MCF2L-231ENST00000494043 ALDH1A1P00352 501 aa12.97□□□□□ -0.33
MCF2L-231ENST00000494043 CYP3A4P08684 503 aa12.97□□□□□ -0.33
MCF2L-231ENST00000494043 BCRP11274 1271 aa12.97□□□□□ -0.33
MCF2L-231ENST00000494043 GCFC2P16383 781 aaKnown RBP12.97□□□□□ -0.33
MCF2L-231ENST00000494043 MCM7P33993 719 aa12.97□□□□□ -0.33
MCF2L-231ENST00000494043 USP11P51784 963 aa12.97□□□□□ -0.33
MCF2L-231ENST00000494043 PPP4R3AQ6IN85 833 aa12.97□□□□□ -0.33
MCF2L-231ENST00000494043 MOXD1Q6UVY6 613 aa12.97□□□□□ -0.33
MCF2L-231ENST00000494043 ANKRD35Q8N283 1001 aa12.97□□□□□ -0.33
MCF2L-231ENST00000494043 PORCNQ9H237 461 aa12.97□□□□□ -0.33
MCF2L-231ENST00000494043 R3HDMLQ9H3Y0 253 aa12.97□□□□□ -0.33
MCF2L-231ENST00000494043 CPA4Q9UI42 421 aa12.97□□□□□ -0.33
MCF2L-231ENST00000494043 TCHHQ07283 1943 aa12.97□□□□□ -0.33
MCF2L-231ENST00000494043 THSD7BQ9C0I4 1608 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 CA12O43570 354 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 PPP6R2O75170 966 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 TDP2O95551 362 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 PTMSP20962 102 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 CIITAP33076 1130 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 VEGFBP49765 207 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 HTRA3P83110 453 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 ATP2C1P98194 919 aaPredicted RBP12.96□□□□□ -0.33
MCF2L-231ENST00000494043 PTGDRQ13258 359 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 CRHR2Q13324 411 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 WDR78Q5VTH9 848 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 C17orf99Q6UX52 265 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 JMYQ8N9B5 988 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 MBOAT7Q96N66 472 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 TAAR1Q96RJ0 339 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 RMDN3Q96TC7 470 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 MMP19Q99542 508 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 EFCC1Q9HA90 598 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 PXMP2Q9NR77 195 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 LMBRD1Q9NUN5 540 aa12.96□□□□□ -0.33
MCF2L-231ENST00000494043 MYH7BA7E2Y1 1941 aa12.96□□□□□ -0.34
MCF2L-231ENST00000494043 CYP3A7-CYP3A51PA0A087WV96 503 aa12.95□□□□□ -0.34
MCF2L-231ENST00000494043 SLC37A4O43826 429 aa12.95□□□□□ -0.34
MCF2L-231ENST00000494043 NEMFO60524 1076 aa12.95□□□□□ -0.34
MCF2L-231ENST00000494043 FCER1AP12319 257 aa12.95□□□□□ -0.34
MCF2L-231ENST00000494043 EIF2AK2P19525 551 aaKnown RBP12.95□□□□□ -0.34
MCF2L-231ENST00000494043 CYP3A7P24462 503 aa12.95□□□□□ -0.34
MCF2L-231ENST00000494043 MARCKSP29966 332 aaPredicted RBP12.95□□□□□ -0.34
MCF2L-231ENST00000494043 MAP2K2P36507 400 aa12.95□□□□□ -0.34
MCF2L-231ENST00000494043 ME1P48163 572 aa12.95□□□□□ -0.34
MCF2L-231ENST00000494043 UBXN2AP68543 259 aa12.95□□□□□ -0.34
MCF2L-231ENST00000494043 KCTD2Q14681 263 aa12.95□□□□□ -0.34
MCF2L-231ENST00000494043 ARHGEF16Q5VV41 709 aa12.95□□□□□ -0.34
MCF2L-231ENST00000494043 C4orf32Q8N8J7 132 aa12.95□□□□□ -0.34
MCF2L-231ENST00000494043 IL31RAQ8NI17 732 aa12.95□□□□□ -0.34
MCF2L-231ENST00000494043 PURBQ96QR8 312 aaKnown RBP12.95□□□□□ -0.34
MCF2L-231ENST00000494043 PDCD2LQ9BRP1 358 aa12.95□□□□□ -0.34
MCF2L-231ENST00000494043 TMEM60Q9H2L4 133 aa12.95□□□□□ -0.34
MCF2L-231ENST00000494043 LCTP09848 1927 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 DNAJC25-GNG10A0A024R161 153 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 POTEB2H3BUK9 544 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 LAD1O00515 517 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 GADD45BO75293 160 aaPredicted RBP12.94□□□□□ -0.34
MCF2L-231ENST00000494043 OR52Z1P0C646 297 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 MAPK4P31152 587 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 UBE2HP62256 183 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 CNTN2Q02246 1040 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 PGM5Q15124 567 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 Q4G0T1 1027 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 PCNX4Q63HM2 1172 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 ARL6IP4Q66PJ3 421 aaKnown RBP12.94□□□□□ -0.34
MCF2L-231ENST00000494043 XRRA1Q6P2D8 792 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 CCAR1Q8IX12 1150 aaKnown RBP12.94□□□□□ -0.34
MCF2L-231ENST00000494043 ABRAQ8N0Z2 381 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 FAM133AQ8N9E0 248 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 KRI1Q8N9T8 703 aaKnown RBP12.94□□□□□ -0.34
MCF2L-231ENST00000494043 DNERQ8NFT8 737 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 NSUN6Q8TEA1 469 aaKnown RBP12.94□□□□□ -0.34
MCF2L-231ENST00000494043 DDX25Q9UHL0 483 aaKnown RBP12.94□□□□□ -0.34
MCF2L-231ENST00000494043 FBXO2Q9UK22 296 aaPredicted RBP12.94□□□□□ -0.34
MCF2L-231ENST00000494043 PCDHA7Q9UN72 937 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 MRVI1Q9Y6F6 885 aa12.94□□□□□ -0.34
MCF2L-231ENST00000494043 FAM86B1E9PN63 330 aa12.93□□□□□ -0.34
MCF2L-231ENST00000494043 STRNO43815 780 aa12.93□□□□□ -0.34
MCF2L-231ENST00000494043 FAM86B2P0C5J1 330 aa12.93□□□□□ -0.34
MCF2L-231ENST00000494043 PTPREP23469 700 aa12.93□□□□□ -0.34
MCF2L-231ENST00000494043 ZNF76P36508 570 aa12.93□□□□□ -0.34
MCF2L-231ENST00000494043 PRPHP41219 470 aa12.93□□□□□ -0.34
MCF2L-231ENST00000494043 CALCRLQ16602 461 aa12.93□□□□□ -0.34
MCF2L-231ENST00000494043 AXDND1Q5T1B0 1012 aaPredicted RBP12.93□□□□□ -0.34
MCF2L-231ENST00000494043 GPR142Q7Z601 462 aa12.93□□□□□ -0.34
MCF2L-231ENST00000494043 PLEKHH3Q7Z736 793 aa12.93□□□□□ -0.34
MCF2L-231ENST00000494043 FERMT2Q96AC1 680 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms