RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 MCF2L2Q86YR7 1114 aa19.41■□□□□ 0.7
PTPRU-208ENST00000493601 GBF1Q92538 1859 aa19.41■□□□□ 0.7
PTPRU-208ENST00000493601 KIAA1217Q5T5P2 1943 aa19.41■□□□□ 0.7
PTPRU-208ENST00000493601 FGBP02675 491 aa19.4■□□□□ 0.7
PTPRU-208ENST00000493601 TXNP10599 105 aaKnown RBP19.4■□□□□ 0.7
PTPRU-208ENST00000493601 CCL23P55773 120 aa19.4■□□□□ 0.7
PTPRU-208ENST00000493601 TTLL4Q14679 1199 aa19.4■□□□□ 0.7
PTPRU-208ENST00000493601 IFIT1BQ5T764 474 aaKnown RBP19.4■□□□□ 0.7
PTPRU-208ENST00000493601 TTC22Q5TAA0 569 aa19.4■□□□□ 0.7
PTPRU-208ENST00000493601 NSUN6Q8TEA1 469 aaKnown RBP19.4■□□□□ 0.7
PTPRU-208ENST00000493601 PBX4Q9BYU1 374 aa19.4■□□□□ 0.7
PTPRU-208ENST00000493601 WNT8AQ9H1J5 351 aa19.4■□□□□ 0.7
PTPRU-208ENST00000493601 TANC1Q9C0D5 1861 aa19.39■□□□□ 0.7
PTPRU-208ENST00000493601 VCANP13611 3396 aa19.39■□□□□ 0.69
PTPRU-208ENST00000493601 A6NJR5 290 aa19.39■□□□□ 0.69
PTPRU-208ENST00000493601 GRIN2CQ14957 1233 aa19.39■□□□□ 0.69
PTPRU-208ENST00000493601 RAB30Q15771 203 aa19.39■□□□□ 0.69
PTPRU-208ENST00000493601 QRICH1Q2TAL8 776 aa19.39■□□□□ 0.69
PTPRU-208ENST00000493601 FBXO11Q86XK2 927 aa19.39■□□□□ 0.69
PTPRU-208ENST00000493601 RPUSD2Q8IZ73 545 aaKnown RBP19.39■□□□□ 0.69
PTPRU-208ENST00000493601 TRMT13Q9NUP7 481 aaKnown RBP19.39■□□□□ 0.69
PTPRU-208ENST00000493601 MRPL11Q9Y3B7 192 aaKnown RBP19.39■□□□□ 0.69
PTPRU-208ENST00000493601 FAM47CQ5HY64 1035 aa19.38■□□□□ 0.69
PTPRU-208ENST00000493601 NFRKBQ6P4R8 1299 aa19.38■□□□□ 0.69
PTPRU-208ENST00000493601 SYTL5Q8TDW5 730 aaPredicted RBP19.38■□□□□ 0.69
PTPRU-208ENST00000493601 RUFY2Q8WXA3 655 aa19.38■□□□□ 0.69
PTPRU-208ENST00000493601 IWS1Q96ST2 819 aa19.38■□□□□ 0.69
PTPRU-208ENST00000493601 IL25Q9H293 177 aa19.38■□□□□ 0.69
PTPRU-208ENST00000493601 JMJD4Q9H9V9 463 aa19.38■□□□□ 0.69
PTPRU-208ENST00000493601 MSRAQ9UJ68 235 aa19.38■□□□□ 0.69
PTPRU-208ENST00000493601 GRXCR1A8MXD5 290 aa19.37■□□□□ 0.69
PTPRU-208ENST00000493601 PFKMP08237 780 aa19.37■□□□□ 0.69
PTPRU-208ENST00000493601 GSPT1P15170 499 aaKnown RBP19.37■□□□□ 0.69
PTPRU-208ENST00000493601 PDE4AP27815 886 aa19.37■□□□□ 0.69
PTPRU-208ENST00000493601 PBX2P40425 430 aa19.37■□□□□ 0.69
PTPRU-208ENST00000493601 TRDNQ13061 729 aa19.37■□□□□ 0.69
PTPRU-208ENST00000493601 NBPF20Q3BBV1 942 aa19.37■□□□□ 0.69
PTPRU-208ENST00000493601 OTOP2Q7RTS6 562 aa19.37■□□□□ 0.69
PTPRU-208ENST00000493601 COPS5Q92905 334 aa19.37■□□□□ 0.69
PTPRU-208ENST00000493601 RMDN3Q96TC7 470 aa19.37■□□□□ 0.69
PTPRU-208ENST00000493601 CXXC1Q9P0U4 656 aaPredicted RBP19.37■□□□□ 0.69
PTPRU-208ENST00000493601 ARIH2O95376 493 aa19.36■□□□□ 0.69
PTPRU-208ENST00000493601 CYP2C9P11712 490 aa19.36■□□□□ 0.69
PTPRU-208ENST00000493601 PTPN11Q06124 597 aaPredicted RBP19.36■□□□□ 0.69
PTPRU-208ENST00000493601 STXBP2Q15833 593 aa19.36■□□□□ 0.69
PTPRU-208ENST00000493601 SCLYQ96I15 445 aa19.36■□□□□ 0.69
PTPRU-208ENST00000493601 TAAR1Q96RJ0 339 aa19.36■□□□□ 0.69
PTPRU-208ENST00000493601 AMNQ9BXJ7 453 aa19.36■□□□□ 0.69
PTPRU-208ENST00000493601 COL25A1Q9BXS0 654 aaPredicted RBP19.36■□□□□ 0.69
PTPRU-208ENST00000493601 VAT1LQ9HCJ6 419 aa19.36■□□□□ 0.69
PTPRU-208ENST00000493601 COL20A1Q9P218 1284 aa19.36■□□□□ 0.69
PTPRU-208ENST00000493601 SUPT16HQ9Y5B9 1047 aaKnown RBP19.36■□□□□ 0.69
PTPRU-208ENST00000493601 GH1P01241 217 aa19.35■□□□□ 0.69
PTPRU-208ENST00000493601 SEC23AQ15436 765 aa19.35■□□□□ 0.69
PTPRU-208ENST00000493601 ARHGEF16Q5VV41 709 aa19.35■□□□□ 0.69
PTPRU-208ENST00000493601 CCDC62Q6P9F0 684 aa19.35■□□□□ 0.69
PTPRU-208ENST00000493601 SEPT14Q6ZU15 432 aa19.35■□□□□ 0.69
PTPRU-208ENST00000493601 TBC1D5Q92609 795 aa19.35■□□□□ 0.69
PTPRU-208ENST00000493601 GAS2L1Q99501 681 aaPredicted RBP19.35■□□□□ 0.69
PTPRU-208ENST00000493601 CHD7Q9P2D1 2997 aa19.35■□□□□ 0.69
PTPRU-208ENST00000493601 SLC4A7Q9Y6M7 1214 aa19.35■□□□□ 0.69
PTPRU-208ENST00000493601 U3KPZ7 1027 aaPredicted RBP19.35■□□□□ 0.69
PTPRU-208ENST00000493601 SCN5AQ14524 2016 aa19.34■□□□□ 0.69
PTPRU-208ENST00000493601 KLRF2D3W0D1 207 aa19.34■□□□□ 0.69
PTPRU-208ENST00000493601 PITPNM1O00562 1244 aa19.34■□□□□ 0.69
PTPRU-208ENST00000493601 HSD17B4P51659 736 aa19.34■□□□□ 0.69
PTPRU-208ENST00000493601 CYB5R4Q7L1T6 521 aa19.34■□□□□ 0.69
PTPRU-208ENST00000493601 STAG2Q8N3U4 1231 aa19.34■□□□□ 0.69
PTPRU-208ENST00000493601 AFG1LQ8WV93 481 aa19.34■□□□□ 0.69
PTPRU-208ENST00000493601 ZBBXA8MT70 800 aa19.33■□□□□ 0.68
PTPRU-208ENST00000493601 ZBTB5O15062 677 aa19.33■□□□□ 0.68
PTPRU-208ENST00000493601 CFBP00751 764 aa19.33■□□□□ 0.68
PTPRU-208ENST00000493601 MMP3P08254 477 aa19.33■□□□□ 0.68
PTPRU-208ENST00000493601 EIF2AK2P19525 551 aaKnown RBP19.33■□□□□ 0.68
PTPRU-208ENST00000493601 RFC2P35250 354 aa19.33■□□□□ 0.68
PTPRU-208ENST00000493601 ARHGAP1Q07960 439 aa19.33■□□□□ 0.68
PTPRU-208ENST00000493601 LY6KQ17RY6 165 aa19.33■□□□□ 0.68
PTPRU-208ENST00000493601 MTMR8Q96EF0 704 aa19.33■□□□□ 0.68
PTPRU-208ENST00000493601 SLC28A3Q9HAS3 691 aa19.33■□□□□ 0.68
PTPRU-208ENST00000493601 PXMP2Q9NR77 195 aa19.33■□□□□ 0.68
PTPRU-208ENST00000493601 MAD2L2Q9UI95 211 aa19.33■□□□□ 0.68
PTPRU-208ENST00000493601 NOD1Q9Y239 953 aa19.33■□□□□ 0.68
PTPRU-208ENST00000493601 ERICH2A1L162 156 aa19.32■□□□□ 0.68
PTPRU-208ENST00000493601 EIF3JO75822 258 aaKnown RBP19.32■□□□□ 0.68
PTPRU-208ENST00000493601 ACTN1P12814 892 aa19.32■□□□□ 0.68
PTPRU-208ENST00000493601 CHMLP26374 656 aa19.32■□□□□ 0.68
PTPRU-208ENST00000493601 CHMP4BP1P59074 171 aa19.32■□□□□ 0.68
PTPRU-208ENST00000493601 GHRHRQ02643 423 aa19.32■□□□□ 0.68
PTPRU-208ENST00000493601 TRAF1Q13077 416 aa19.32■□□□□ 0.68
PTPRU-208ENST00000493601 BFSP2Q13515 415 aa19.32■□□□□ 0.68
PTPRU-208ENST00000493601 SART3Q15020 963 aaKnown RBP19.32■□□□□ 0.68
PTPRU-208ENST00000493601 RALYLQ86SE5 291 aaKnown RBP19.32■□□□□ 0.68
PTPRU-208ENST00000493601 CCDC155Q8N6L0 562 aa19.32■□□□□ 0.68
PTPRU-208ENST00000493601 RETREG2Q8NC44 543 aa19.32■□□□□ 0.68
PTPRU-208ENST00000493601 NKX2-4Q9H2Z4 354 aa19.32■□□□□ 0.68
PTPRU-208ENST00000493601 PRDM12Q9H4Q4 367 aa19.32■□□□□ 0.68
PTPRU-208ENST00000493601 MAP3K20Q9NYL2 800 aaKnown RBP19.32■□□□□ 0.68
PTPRU-208ENST00000493601 PCDHA1Q9Y5I3 950 aa19.32■□□□□ 0.68
PTPRU-208ENST00000493601 PALM3A6NDB9 673 aaPredicted RBP19.31■□□□□ 0.68
PTPRU-208ENST00000493601 OPLAHO14841 1288 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms