RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 U2AF2P26368 475 aaKnown RBP eCLIP10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 KIF5BP33176 963 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 STAT2P52630 851 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 NR5A1Q13285 461 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 MUM1L1Q5H9M0 696 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 GPATCH4Q5T3I0 446 aaKnown RBP10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 SYDE2Q5VT97 1194 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 FAM133AQ8N9E0 248 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 RGS22Q8NE09 1264 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 KIFC2Q96AC6 838 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 AGBL1Q96MI9 1066 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 LZTS2Q9BRK4 669 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 TINF2Q9BSI4 451 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 FTOQ9C0B1 505 aaKnown RBP eCLIP10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 RANBP17Q9H2T7 1088 aaKnown RBP10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 COLQQ9Y215 455 aaPredicted RBP10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 DDX49Q9Y6V7 483 aaKnown RBP10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 SCN10AQ9Y5Y9 1956 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 MYH7BA7E2Y1 1941 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 TCHHQ07283 1943 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 TRANK1O15050 2925 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 SOWAHBA6NEL2 793 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 CPLX1O14810 134 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 CTAGE5O15320 804 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 SEPT4O43236 478 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 BAG4O95429 457 aaKnown RBP10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 MMP1P03956 469 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 GNAQP50148 359 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 CNTN2Q02246 1040 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 LRRC26Q2I0M4 334 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 CCDC96Q2M329 555 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 HABP4Q5JVS0 413 aaKnown RBP10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 MFSD14CQ5VZR4 134 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 CCSAPQ6IQ19 270 aaPredicted RBP10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 SAMD1Q6SPF0 538 aaPredicted RBP10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 DPP9Q86TI2 863 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 LENG1Q96BZ8 264 aaPredicted RBP10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 MMP19Q99542 508 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 A1CFQ9NQ94 594 aaKnown RBP10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 BARHL2Q9NY43 387 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 MYH15Q9Y2K3 1946 aa10.43□□□□□ -0.74
TM4SF1-203ENST00000493298 DOCK5Q9H7D0 1870 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 SYNGAP1Q96PV0 1343 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 PNMA6FA0A0J9YX94 578 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 ZBTB5O15062 677 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 RAD21O60216 631 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 ADAMTS4O75173 837 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 COPB2P35606 906 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 CLK2P49760 499 aaKnown RBP10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 FXR1P51114 621 aaKnown RBP eCLIP10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 IRX5P78411 483 aaPredicted RBP10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 NUCB2P80303 420 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 SNX17Q15036 470 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 PPP4R3BQ5MIZ7 849 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 NECAB2Q7Z6G3 386 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 ZNF467Q7Z7K2 595 aaPredicted RBP10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 FAM160B2Q86V87 743 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 CCAR1Q8IX12 1150 aaKnown RBP10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 CPXCR1Q8N123 301 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 RASGRP4Q8TDF6 673 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 CLEC4DQ8WXI8 215 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 C8orf76Q96K31 380 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 PURBQ96QR8 312 aaKnown RBP10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 GDF15Q99988 308 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 ZMYND12Q9H0C1 365 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 NRBP1Q9UHY1 535 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 VCANP13611 3396 aa10.42□□□□□ -0.74
TM4SF1-203ENST00000493298 VPS37CA5D8V6 355 aaPredicted RBP10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 DNM1LO00429 736 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 CDKL5O76039 1030 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 HSP90AA1P07900 732 aaKnown RBP10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 FDX1P10109 184 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 PTGS1P23219 599 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 NKX3-2P78367 333 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 DNM1Q05193 864 aaKnown RBP10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 NBR1Q14596 966 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 CDC37Q16543 378 aaPredicted RBP10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 ANO1Q5XXA6 986 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 HOMER1Q86YM7 354 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 MSL3Q8N5Y2 521 aaKnown RBP10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 DAGLBQ8NCG7 672 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 CHST13Q8NET6 341 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 MORC4Q8TE76 937 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 CHURC1Q8WUH1 139 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 CRYGNQ8WXF5 182 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 C11orf49Q9H6J7 331 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 TMEM260Q9NX78 707 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 RBM27Q9P2N5 1060 aaKnown RBP10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 PCDHA6Q9UN73 950 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 PCDHA8Q9Y5H6 950 aa10.41□□□□□ -0.74
TM4SF1-203ENST00000493298 TRIP12Q14669 1992 aaPredicted RBP10.4□□□□□ -0.74
TM4SF1-203ENST00000493298 MYADML2A6NDP7 307 aa10.4□□□□□ -0.74
TM4SF1-203ENST00000493298 MEIS2O14770 477 aa10.4□□□□□ -0.74
TM4SF1-203ENST00000493298 MSCO60682 206 aa10.4□□□□□ -0.74
TM4SF1-203ENST00000493298 ZBED4O75132 1171 aa10.4□□□□□ -0.74
TM4SF1-203ENST00000493298 ICAM1P05362 532 aa10.4□□□□□ -0.74
TM4SF1-203ENST00000493298 KCTD2Q14681 263 aa10.4□□□□□ -0.74
TM4SF1-203ENST00000493298 PTPAQ15257 358 aa10.4□□□□□ -0.74
TM4SF1-203ENST00000493298 LRRC41Q15345 812 aa10.4□□□□□ -0.74
TM4SF1-203ENST00000493298 FOXD4L6Q3SYB3 417 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms