RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 SPA17Q15506 151 aa7□□□□□ -1.29
NF1-215ENST00000493220 PAF1Q8N7H5 531 aa7□□□□□ -1.29
NF1-215ENST00000493220 MSANTD4Q8NCY6 345 aa7□□□□□ -1.29
NF1-215ENST00000493220 ADPGKQ9BRR6 497 aa7□□□□□ -1.29
NF1-215ENST00000493220 KATNAL1Q9BW62 490 aa7□□□□□ -1.29
NF1-215ENST00000493220 TMEM88BA6NKF7 163 aa7□□□□□ -1.29
NF1-215ENST00000493220 KBTBD13C9JR72 458 aa7□□□□□ -1.29
NF1-215ENST00000493220 EIF2AK2P19525 551 aaKnown RBP7□□□□□ -1.29
NF1-215ENST00000493220 CETN2P41208 172 aa7□□□□□ -1.29
NF1-215ENST00000493220 SNAP25P60880 206 aa7□□□□□ -1.29
NF1-215ENST00000493220 TOB2Q14106 344 aaPredicted RBP7□□□□□ -1.29
NF1-215ENST00000493220 PRAMEF18Q5VWM3 479 aa7□□□□□ -1.29
NF1-215ENST00000493220 ZKSCAN4Q969J2 545 aaPredicted RBP7□□□□□ -1.29
NF1-215ENST00000493220 PLIN2Q99541 437 aa7□□□□□ -1.29
NF1-215ENST00000493220 KIAA1683Q9H0B3 1180 aa7□□□□□ -1.29
NF1-215ENST00000493220 USP11P51784 963 aa7□□□□□ -1.29
NF1-215ENST00000493220 CDR1P51861 262 aa7□□□□□ -1.29
NF1-215ENST00000493220 ZNF280AP59817 542 aaPredicted RBP7□□□□□ -1.29
NF1-215ENST00000493220 EXOSC10Q01780 885 aaKnown RBP7□□□□□ -1.29
NF1-215ENST00000493220 UBE2SQ16763 222 aa7□□□□□ -1.29
NF1-215ENST00000493220 WDR44Q5JSH3 913 aa7□□□□□ -1.29
NF1-215ENST00000493220 GPBP1Q86WP2 473 aa7□□□□□ -1.29
NF1-215ENST00000493220 LEO1Q8WVC0 666 aaPredicted RBP7□□□□□ -1.29
NF1-215ENST00000493220 RUFY1Q96T51 708 aa7□□□□□ -1.29
NF1-215ENST00000493220 MRPL44Q9H9J2 332 aaKnown RBP7□□□□□ -1.29
NF1-215ENST00000493220 DACT1Q9NYF0 836 aa7□□□□□ -1.29
NF1-215ENST00000493220 TMX2Q9Y320 296 aa7□□□□□ -1.29
NF1-215ENST00000493220 BIN1O00499 593 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 GNA14O95837 355 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 OAZ1P54368 228 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 YARSP54577 528 aaKnown RBP6.99□□□□□ -1.29
NF1-215ENST00000493220 ARL6IP4Q66PJ3 421 aaKnown RBP6.99□□□□□ -1.29
NF1-215ENST00000493220 ADALQ6DHV7 355 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 PLEKHH3Q7Z736 793 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 SLC7A3Q8WY07 619 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 FAM20AQ96MK3 541 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 COL4A3BPQ9Y5P4 624 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 BTBD18B2RXH4 712 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 TLR3O15455 904 aaKnown RBP6.99□□□□□ -1.29
NF1-215ENST00000493220 SH3BP5O60239 455 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 HOXC6P09630 235 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 PDHBP11177 359 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 HOXA13P31271 388 aaPredicted RBP6.99□□□□□ -1.29
NF1-215ENST00000493220 RGS22Q8NE09 1264 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 FAM212AQ96EL1 285 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 STK17AQ9UEE5 414 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 UNCXA6NJT0 531 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 ERLIN2O94905 339 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 ICAM1P05362 532 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 MYL1P05976 194 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 CUL4AQ13619 759 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 TAF1DQ9H5J8 278 aaPredicted RBP6.99□□□□□ -1.29
NF1-215ENST00000493220 FZD9O00144 591 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 POLR2DO15514 142 aaKnown RBP6.99□□□□□ -1.29
NF1-215ENST00000493220 BRD1O95696 1058 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 P4HA1P13674 534 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 ATF7P17544 494 aaPredicted RBP6.99□□□□□ -1.29
NF1-215ENST00000493220 KIF23Q02241 960 aaPredicted RBP6.99□□□□□ -1.29
NF1-215ENST00000493220 NFIAQ12857 509 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 ALCAMQ13740 583 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 POLR3EQ9NVU0 708 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 PRR12Q9ULL5 1215 aa6.99□□□□□ -1.29
NF1-215ENST00000493220 PRELPP51888 382 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 RGMBQ6NW40 437 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 SOCS4Q8WXH5 440 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 TTC12Q9H892 705 aaPredicted RBP6.98□□□□□ -1.29
NF1-215ENST00000493220 PRDM16Q9HAZ2 1276 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 KCNQ5Q9NR82 932 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 COL1A1P02452 1464 aaPredicted RBP6.98□□□□□ -1.29
NF1-215ENST00000493220 DDTLA6NHG4 134 aaPredicted RBP6.98□□□□□ -1.29
NF1-215ENST00000493220 WDR64B1ANS9 1081 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 GCNT3O95395 438 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 YWHAEP62258 255 aaKnown RBP6.98□□□□□ -1.29
NF1-215ENST00000493220 IGDCC4Q8TDY8 1250 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 AKT3Q9Y243 479 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 XPOTO43592 962 aaKnown RBP6.98□□□□□ -1.29
NF1-215ENST00000493220 SNX16P57768 344 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 PTGDRQ13258 359 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 TRPC3Q13507 836 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 DEFB115Q30KQ5 88 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 ITGB4P16144 1822 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 PDHXO00330 501 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 GSDMDP57764 484 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 CDC42EP1Q00587 391 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 NOGQ13253 232 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 POSTNQ15063 836 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 HERC4Q5GLZ8 1057 aaPredicted RBP6.98□□□□□ -1.29
NF1-215ENST00000493220 SPOUT1Q5T280 376 aaKnown RBP6.98□□□□□ -1.29
NF1-215ENST00000493220 KIAA1328Q86T90 577 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 C7orf31Q8N865 590 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 INCENPQ9NQS7 918 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 LRFN2Q9ULH4 789 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 MTMR6Q9Y217 621 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 SALL3Q9BXA9 1300 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 SORBS3O60504 671 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 NEBLO76041 1014 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 GH1P01241 217 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 ZSCAN20P17040 1043 aaPredicted RBP6.98□□□□□ -1.29
NF1-215ENST00000493220 CMA1P23946 247 aa6.98□□□□□ -1.29
NF1-215ENST00000493220 LIG4P49917 911 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms