RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 DDX49Q9Y6V7 483 aaKnown RBP10.72□□□□□ -0.69
CSTF1-206ENST00000493039 COBLO75128 1261 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 PGK2P07205 417 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 TOB1P50616 345 aaPredicted RBP10.72□□□□□ -0.69
CSTF1-206ENST00000493039 FCHSD1Q86WN1 690 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 MCF2L2Q86YR7 1114 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 NOSTRINQ8IVI9 506 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 FAM133AQ8N9E0 248 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 FBXO40Q9UH90 709 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 TSKSQ9UJT2 592 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 BRCA2P51587 3418 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 F13A1P00488 732 aa10.71□□□□□ -0.69
CSTF1-206ENST00000493039 LACTBP83111 547 aaPredicted RBP10.71□□□□□ -0.69
CSTF1-206ENST00000493039 PIK3AP1Q6ZUJ8 805 aa10.71□□□□□ -0.69
CSTF1-206ENST00000493039 ANKRD35Q8N283 1001 aa10.71□□□□□ -0.69
CSTF1-206ENST00000493039 TRIM47Q96LD4 638 aa10.71□□□□□ -0.69
CSTF1-206ENST00000493039 SAGE1Q9NXZ1 904 aa10.71□□□□□ -0.69
CSTF1-206ENST00000493039 MAP3K20Q9NYL2 800 aaKnown RBP10.71□□□□□ -0.69
CSTF1-206ENST00000493039 CHMP5Q9NZZ3 219 aa10.71□□□□□ -0.69
CSTF1-206ENST00000493039 GJD2Q9UKL4 321 aa10.71□□□□□ -0.69
CSTF1-206ENST00000493039 SOWAHBA6NEL2 793 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 GPR25O00155 361 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 FCER1AP12319 257 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 PTPREP23469 700 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 MAPK4P31152 587 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 COPB2P35606 906 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 MAP2K1Q02750 393 aaPredicted RBP10.7□□□□□ -0.7
CSTF1-206ENST00000493039 GRB14Q14449 540 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 SAFBQ15424 915 aaKnown RBP eCLIP10.7□□□□□ -0.7
CSTF1-206ENST00000493039 MORN1Q5T089 497 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 WDR78Q5VTH9 848 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 IL31RAQ8NI17 732 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 BICD2Q8TD16 824 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 USP6NLQ92738 828 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 GLT8D2Q9H1C3 349 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 STRNO43815 780 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 ADORA2AP29274 412 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 NUCB2P80303 420 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 SP3Q02447 781 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 INF2Q27J81 1249 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 PLEKHH3Q7Z736 793 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 ABRAQ8N0Z2 381 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 SAMD3Q8N6K7 520 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 JMYQ8N9B5 988 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 MMP19Q99542 508 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 ANO3Q9BYT9 981 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 MAF1Q9H063 256 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 DOCK3Q8IZD9 2030 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 RPTORQ8N122 1335 aa10.7□□□□□ -0.7
CSTF1-206ENST00000493039 PSMC4P43686 418 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 PSEN1P49768 467 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 UBXN2AP68543 259 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 AP3B2Q13367 1082 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 KCTD2Q14681 263 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 ZNF792Q3KQV3 632 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 FOXD4L6Q3SYB3 417 aaPredicted RBP10.69□□□□□ -0.7
CSTF1-206ENST00000493039 FOXD4L3Q6VB84 417 aaPredicted RBP10.69□□□□□ -0.7
CSTF1-206ENST00000493039 TBCKQ8TEA7 893 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 FTOQ9C0B1 505 aaKnown RBP eCLIP10.69□□□□□ -0.7
CSTF1-206ENST00000493039 FRMPD4Q14CM0 1322 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 FOSP01100 380 aaPredicted RBP10.69□□□□□ -0.7
CSTF1-206ENST00000493039 SREBF1P36956 1147 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 MYSM1Q5VVJ2 828 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 CYP2W1Q8TAV3 490 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 ZNF296Q8WUU4 475 aaPredicted RBP10.69□□□□□ -0.7
CSTF1-206ENST00000493039 RMDN3Q96TC7 470 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 ZSCAN16Q9H4T2 348 aaPredicted RBP10.69□□□□□ -0.7
CSTF1-206ENST00000493039 BRMS1Q9HCU9 246 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 PXMP2Q9NR77 195 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 PFASO15067 1338 aa10.69□□□□□ -0.7
CSTF1-206ENST00000493039 CCDC194A0A1B0GVG4 234 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 SLC15A5A6NIM6 579 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 SPDYE3A6NKU9 549 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 POTEB2H3BUK9 544 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 IGHA2P01877 340 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 MRPS9P82933 396 aaKnown RBP10.68□□□□□ -0.7
CSTF1-206ENST00000493039 NONOQ15233 471 aaKnown RBP eCLIP10.68□□□□□ -0.7
CSTF1-206ENST00000493039 KRT25Q7Z3Z0 450 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 BRAPQ7Z569 592 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 NPLOC4Q8TAT6 608 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 PDCD2LQ9BRP1 358 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 LCTP09848 1927 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 ZSWIM8A7E2V4 1837 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 RGS20O76081 388 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 MYCNP04198 464 aaPredicted RBP10.68□□□□□ -0.7
CSTF1-206ENST00000493039 EIF2AK2P19525 551 aaKnown RBP10.68□□□□□ -0.7
CSTF1-206ENST00000493039 ARHGAP4P98171 946 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 PGM5Q15124 567 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 VSIG10LQ86VR7 867 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 CCAR1Q8IX12 1150 aaKnown RBP10.68□□□□□ -0.7
CSTF1-206ENST00000493039 CD99L2Q8TCZ2 262 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 TNPO1Q92973 898 aaKnown RBP10.68□□□□□ -0.7
CSTF1-206ENST00000493039 GABRQQ9UN88 632 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 PCDHB6Q9Y5E3 794 aa10.68□□□□□ -0.7
CSTF1-206ENST00000493039 FAM86B1E9PN63 330 aa10.67□□□□□ -0.7
CSTF1-206ENST00000493039 TNPO2O14787 897 aaKnown RBP10.67□□□□□ -0.7
CSTF1-206ENST00000493039 NR3C2P08235 984 aa10.67□□□□□ -0.7
CSTF1-206ENST00000493039 CYP3A4P08684 503 aa10.67□□□□□ -0.7
CSTF1-206ENST00000493039 HOXC6P09630 235 aa10.67□□□□□ -0.7
CSTF1-206ENST00000493039 FAM86B2P0C5J1 330 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms