RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 A0A1W2PQ45 241 aaPredicted RBP8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 A0A1W2PQY0 241 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 GOLGA8AA7E2F4 631 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 GOLGA8BA8MQT2 603 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 KBTBD13C9JR72 458 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 GCOM1H8Y6P7 765 aaPredicted RBP8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 MEIS2O14770 477 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 DYNC1LI2O43237 492 aaPredicted RBP8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 EVI5O60447 810 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 RGS20O76081 388 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 MYCNP04198 464 aaPredicted RBP8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 NR3C2P08235 984 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 POLR2MP0CAP2 368 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 EIF2AK2P19525 551 aaKnown RBP8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 CST5P28325 142 aaPredicted RBP8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 PDIA3P30101 505 aaKnown RBP8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 ACLYP53396 1101 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 RCAN1P53805 252 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 ATN1P54259 1190 aaPredicted RBP8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 BEX3Q00994 111 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 PDE4DQ08499 809 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 SNX17Q15036 470 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 NTRK3Q16288 839 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 KCNA10Q16322 511 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 C8orf34Q49A92 452 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 DUSP28Q4G0W2 176 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 TYW1BQ6NUM6 668 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 CCDC62Q6P9F0 684 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 USP17L6PQ6QN14 398 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 RNF180Q86T96 592 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 SAMD3Q8N6K7 520 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 SLC17A8Q8NDX2 589 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 IL31RAQ8NI17 732 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 COPS5Q92905 334 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 IWS1Q96ST2 819 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 PDCD2LQ9BRP1 358 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 LARP6Q9BRS8 491 aaKnown RBP8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 WDR11Q9BZH6 1224 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 UPF3BQ9BZI7 483 aaKnown RBP8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 RBM28Q9NW13 759 aaKnown RBP8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 Q9Y3F1 56 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 V9GY48 417 aaPredicted RBP8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 NID2Q14112 1375 aa8.31□□□□□ -1.08
PDLIM1-204ENST00000492511 A0A1W2PPC1 479 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 PIK3CDO00329 1044 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 ADAMTS3O15072 1205 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 ASGR1P07306 291 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 C6orf222P0C671 652 aaPredicted RBP8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 METAP2P50579 478 aaKnown RBP eCLIP8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 RTP1P59025 263 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 MRPS9P82933 396 aaKnown RBP8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 TRAF1Q13077 416 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 PGM5Q15124 567 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 STXBP2Q15833 593 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 GNASQ5JWF2 1037 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 C1orf53Q5VUE5 145 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 ARHGEF16Q5VV41 709 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 WWC2Q6AWC2 1192 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 TLK2Q86UE8 772 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 VSIG10LQ86VR7 867 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 FCHSD1Q86WN1 690 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 C7orf61Q8IZ16 206 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 GPKOWQ92917 476 aaPredicted RBP eCLIP8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 ZFP91Q96JP5 570 aaPredicted RBP8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 PRO3102Q9H379 93 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 SEC63Q9UGP8 760 aaKnown RBP8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 ZMYND8Q9ULU4 1186 aaPredicted RBP8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 CYP46A1Q9Y6A2 500 aa8.3□□□□□ -1.08
PDLIM1-204ENST00000492511 GRIN2DO15399 1336 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 FRMPD4Q14CM0 1322 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 LRRC37A2A6NM11 1700 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 FRMPD3Q5JV73 1810 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 MOXD2PA6NHM9 499 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 STXBP3O00186 592 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 DLL1O00548 723 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 PPFIA3O75145 1194 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 EIF3JO75822 258 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 TXNP10599 105 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 SYN1P17600 705 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 CDK7P50613 346 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 ANAPC15P60006 121 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 FGD1P98174 961 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 PPP2R5BQ15173 497 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 PKN1Q16512 942 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 FSCN1Q16658 493 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 UBE2SQ16763 222 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 LY6KQ17RY6 165 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 TRIM60Q495X7 471 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 SEPT14Q6ZU15 432 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 NOL8Q76FK4 1167 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 HEATR3Q7Z4Q2 680 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 SCFD2Q8WU76 684 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 ALDH8A1Q9H2A2 487 aaPredicted RBP8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 BCAS3Q9H6U6 928 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 PSTPIP2Q9H939 334 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 NCOA5Q9HCD5 579 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 PDRG1Q9NUG6 133 aa8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 RBM27Q9P2N5 1060 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 DDX41Q9UJV9 622 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-204ENST00000492511 NAP1L2Q9ULW6 460 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms