RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 VWCEQ96DN2 955 aa17.07■□□□□ 0.32
SS18L1-205ENST00000492466 COL25A1Q9BXS0 654 aaPredicted RBP17.07■□□□□ 0.32
SS18L1-205ENST00000492466 PPP1R12CQ9BZL4 782 aa17.07■□□□□ 0.32
SS18L1-205ENST00000492466 LOC102724159A0A0B4J2E5 919 aa17.06■□□□□ 0.32
SS18L1-205ENST00000492466 GRXCR1A8MXD5 290 aa17.06■□□□□ 0.32
SS18L1-205ENST00000492466 ACRP10323 421 aa17.06■□□□□ 0.32
SS18L1-205ENST00000492466 PSMC6P62333 389 aa17.06■□□□□ 0.32
SS18L1-205ENST00000492466 RPS6P62753 249 aaKnown RBP17.06■□□□□ 0.32
SS18L1-205ENST00000492466 PWP2Q15269 919 aaKnown RBP17.06■□□□□ 0.32
SS18L1-205ENST00000492466 SEC23AQ15436 765 aa17.06■□□□□ 0.32
SS18L1-205ENST00000492466 ZNF365Q70YC5 407 aa17.06■□□□□ 0.32
SS18L1-205ENST00000492466 TMEM199Q8N511 208 aa17.06■□□□□ 0.32
SS18L1-205ENST00000492466 MAFAQ8NHW3 353 aaPredicted RBP17.06■□□□□ 0.32
SS18L1-205ENST00000492466 ANKS1AQ92625 1134 aa17.06■□□□□ 0.32
SS18L1-205ENST00000492466 AP5M1Q9H0R1 490 aa17.06■□□□□ 0.32
SS18L1-205ENST00000492466 TRPV6Q9H1D0 765 aa17.06■□□□□ 0.32
SS18L1-205ENST00000492466 ADD3Q9UEY8 706 aaKnown RBP17.06■□□□□ 0.32
SS18L1-205ENST00000492466 TRANK1O15050 2925 aa17.05■□□□□ 0.32
SS18L1-205ENST00000492466 WDR19Q8NEZ3 1342 aa17.05■□□□□ 0.32
SS18L1-205ENST00000492466 TLR3O15455 904 aaKnown RBP17.05■□□□□ 0.32
SS18L1-205ENST00000492466 B4GALT4O60513 344 aa17.05■□□□□ 0.32
SS18L1-205ENST00000492466 EDNRBP24530 442 aa17.05■□□□□ 0.32
SS18L1-205ENST00000492466 PBX2P40425 430 aa17.05■□□□□ 0.32
SS18L1-205ENST00000492466 ANTXR2P58335 489 aa17.05■□□□□ 0.32
SS18L1-205ENST00000492466 TMEM87BQ96K49 555 aa17.05■□□□□ 0.32
SS18L1-205ENST00000492466 NEK1Q96PY6 1258 aa17.05■□□□□ 0.32
SS18L1-205ENST00000492466 WDR11Q9BZH6 1224 aa17.05■□□□□ 0.32
SS18L1-205ENST00000492466 CPVLQ9H3G5 476 aa17.05■□□□□ 0.32
SS18L1-205ENST00000492466 PTPDC1A2A3K4 754 aa17.04■□□□□ 0.32
SS18L1-205ENST00000492466 CALML3P27482 149 aa17.04■□□□□ 0.32
SS18L1-205ENST00000492466 RNF207Q6ZRF8 634 aa17.04■□□□□ 0.32
SS18L1-205ENST00000492466 CTCFLQ8NI51 663 aaPredicted RBP17.04■□□□□ 0.32
SS18L1-205ENST00000492466 NOC4LQ9BVI4 516 aaKnown RBP17.04■□□□□ 0.32
SS18L1-205ENST00000492466 SEZ6LQ9BYH1 1024 aa17.04■□□□□ 0.32
SS18L1-205ENST00000492466 PBX4Q9BYU1 374 aa17.04■□□□□ 0.32
SS18L1-205ENST00000492466 UBA5Q9GZZ9 404 aa17.04■□□□□ 0.32
SS18L1-205ENST00000492466 WNT8AQ9H1J5 351 aa17.04■□□□□ 0.32
SS18L1-205ENST00000492466 HIPK3Q9H422 1215 aa17.04■□□□□ 0.32
SS18L1-205ENST00000492466 IL23AQ9NPF7 189 aa17.04■□□□□ 0.32
SS18L1-205ENST00000492466 CXXC1Q9P0U4 656 aaPredicted RBP17.04■□□□□ 0.32
SS18L1-205ENST00000492466 PNMA2Q9UL42 364 aa17.04■□□□□ 0.32
SS18L1-205ENST00000492466 NAP1L2Q9ULW6 460 aaPredicted RBP17.04■□□□□ 0.32
SS18L1-205ENST00000492466 TTC28Q96AY4 2481 aa17.03■□□□□ 0.32
SS18L1-205ENST00000492466 ZEB2O60315 1214 aa17.03■□□□□ 0.32
SS18L1-205ENST00000492466 FOSL2P15408 326 aa17.03■□□□□ 0.32
SS18L1-205ENST00000492466 CDC37Q16543 378 aaPredicted RBP17.03■□□□□ 0.32
SS18L1-205ENST00000492466 USH1GQ495M9 461 aa17.03■□□□□ 0.32
SS18L1-205ENST00000492466 SYNE3Q6ZMZ3 975 aa17.03■□□□□ 0.32
SS18L1-205ENST00000492466 ZNF654Q8IZM8 581 aa17.03■□□□□ 0.32
SS18L1-205ENST00000492466 HERVK_113Q902F9 699 aa17.03■□□□□ 0.32
SS18L1-205ENST00000492466 TIFAQ96CG3 184 aa17.03■□□□□ 0.32
SS18L1-205ENST00000492466 JAKMIP1Q96N16 626 aaKnown RBP17.03■□□□□ 0.32
SS18L1-205ENST00000492466 LRRC2Q9BYS8 371 aa17.03■□□□□ 0.32
SS18L1-205ENST00000492466 ZNF576Q9H609 170 aa17.03■□□□□ 0.32
SS18L1-205ENST00000492466 VAT1LQ9HCJ6 419 aa17.03■□□□□ 0.32
SS18L1-205ENST00000492466 KLRF2D3W0D1 207 aa17.02■□□□□ 0.32
SS18L1-205ENST00000492466 SH2B2O14492 632 aaPredicted RBP17.02■□□□□ 0.32
SS18L1-205ENST00000492466 DDAH1O94760 285 aa17.02■□□□□ 0.32
SS18L1-205ENST00000492466 HMGB1P09429 215 aaKnown RBP17.02■□□□□ 0.32
SS18L1-205ENST00000492466 KIF5BP33176 963 aa17.02■□□□□ 0.32
SS18L1-205ENST00000492466 PURAQ00577 322 aaKnown RBP17.02■□□□□ 0.32
SS18L1-205ENST00000492466 PSRC1Q6PGN9 363 aaPredicted RBP17.02■□□□□ 0.32
SS18L1-205ENST00000492466 TMTC2Q8N394 836 aa17.02■□□□□ 0.32
SS18L1-205ENST00000492466 RGS22Q8NE09 1264 aa17.02■□□□□ 0.32
SS18L1-205ENST00000492466 TBC1D5Q92609 795 aa17.02■□□□□ 0.32
SS18L1-205ENST00000492466 MTA3Q9BTC8 594 aa17.02■□□□□ 0.32
SS18L1-205ENST00000492466 MYL10Q9BUA6 226 aa17.02■□□□□ 0.32
SS18L1-205ENST00000492466 ALDH8A1Q9H2A2 487 aaPredicted RBP17.02■□□□□ 0.32
SS18L1-205ENST00000492466 LY9Q9HBG7 655 aa17.02■□□□□ 0.32
SS18L1-205ENST00000492466 SCN10AQ9Y5Y9 1956 aa17.01■□□□□ 0.31
SS18L1-205ENST00000492466 EIF5BO60841 1220 aaKnown RBP17.01■□□□□ 0.31
SS18L1-205ENST00000492466 CCL23P55773 120 aa17.01■□□□□ 0.31
SS18L1-205ENST00000492466 GRM4Q14833 912 aa17.01■□□□□ 0.31
SS18L1-205ENST00000492466 BLOC1S2Q6QNY1 142 aa17.01■□□□□ 0.31
SS18L1-205ENST00000492466 HOMER1Q86YM7 354 aa17.01■□□□□ 0.31
SS18L1-205ENST00000492466 ADGRF4Q8IZF3 695 aa17.01■□□□□ 0.31
SS18L1-205ENST00000492466 USP38Q8NB14 1042 aa17.01■□□□□ 0.31
SS18L1-205ENST00000492466 DNERQ8NFT8 737 aa17.01■□□□□ 0.31
SS18L1-205ENST00000492466 COPS5Q92905 334 aa17.01■□□□□ 0.31
SS18L1-205ENST00000492466 TCEANC2Q96MN5 208 aa17.01■□□□□ 0.31
SS18L1-205ENST00000492466 SENP2Q9HC62 589 aa17.01■□□□□ 0.31
SS18L1-205ENST00000492466 TRMT13Q9NUP7 481 aaKnown RBP17.01■□□□□ 0.31
SS18L1-205ENST00000492466 SLC12A7Q9Y666 1083 aa17.01■□□□□ 0.31
SS18L1-205ENST00000492466 MYO9BQ13459 2157 aa17.01■□□□□ 0.31
SS18L1-205ENST00000492466 A6NJR5 290 aa17■□□□□ 0.31
SS18L1-205ENST00000492466 ARIH2O95376 493 aa17■□□□□ 0.31
SS18L1-205ENST00000492466 FGBP02675 491 aa17■□□□□ 0.31
SS18L1-205ENST00000492466 CALM1P0DP23 149 aa17■□□□□ 0.31
SS18L1-205ENST00000492466 CALM2P0DP24 149 aa17■□□□□ 0.31
SS18L1-205ENST00000492466 CALM3P0DP25 149 aa17■□□□□ 0.31
SS18L1-205ENST00000492466 PSMA5P28066 241 aa17■□□□□ 0.31
SS18L1-205ENST00000492466 HSPA4P34932 840 aa17■□□□□ 0.31
SS18L1-205ENST00000492466 ADCK5Q3MIX3 580 aa17■□□□□ 0.31
SS18L1-205ENST00000492466 MICU3Q86XE3 530 aa17■□□□□ 0.31
SS18L1-205ENST00000492466 RASEFQ8IZ41 740 aa17■□□□□ 0.31
SS18L1-205ENST00000492466 STAG2Q8N3U4 1231 aa17■□□□□ 0.31
SS18L1-205ENST00000492466 IGDCC4Q8TDY8 1250 aa17■□□□□ 0.31
SS18L1-205ENST00000492466 GPHNQ9NQX3 736 aaPredicted RBP17■□□□□ 0.31
SS18L1-205ENST00000492466 POLR3EQ9NVU0 708 aa17■□□□□ 0.31
SS18L1-205ENST00000492466 COL20A1Q9P218 1284 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms