RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 NFRKBQ6P4R8 1299 aa10.2□□□□□ -0.78
NUP50-217ENST00000491860 SLC30A10Q6XR72 485 aa10.2□□□□□ -0.78
NUP50-217ENST00000491860 ADGRF4Q8IZF3 695 aa10.2□□□□□ -0.78
NUP50-217ENST00000491860 USP38Q8NB14 1042 aa10.2□□□□□ -0.78
NUP50-217ENST00000491860 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.2□□□□□ -0.78
NUP50-217ENST00000491860 AMNQ9BXJ7 453 aa10.2□□□□□ -0.78
NUP50-217ENST00000491860 SCN10AQ9Y5Y9 1956 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 A6NJR5 290 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 FGBP02675 491 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 GOLGA8HP0CJ92 632 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 TXNP10599 105 aaKnown RBP10.19□□□□□ -0.78
NUP50-217ENST00000491860 CSF2RAP15509 400 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 RFC2P35250 354 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 PURAQ00577 322 aaKnown RBP10.19□□□□□ -0.78
NUP50-217ENST00000491860 TMEM240Q5SV17 173 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 RASIP1Q5U651 963 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 KCNV1Q6PIU1 500 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 RALYLQ86SE5 291 aaKnown RBP10.19□□□□□ -0.78
NUP50-217ENST00000491860 CCDC155Q8N6L0 562 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 NCOA7Q8NI08 942 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 HERVK_113Q902F9 699 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 PPP1R12CQ9BZL4 782 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 UBA5Q9GZZ9 404 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 ALDH8A1Q9H2A2 487 aaPredicted RBP10.19□□□□□ -0.78
NUP50-217ENST00000491860 ZNF576Q9H609 170 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 MSRAQ9UJ68 235 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 SUPT16HQ9Y5B9 1047 aaKnown RBP10.19□□□□□ -0.78
NUP50-217ENST00000491860 CHD9Q3L8U1 2897 aa10.19□□□□□ -0.78
NUP50-217ENST00000491860 KIAA1217Q5T5P2 1943 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 PITPNM1O00562 1244 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 ZBTB5O15062 677 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 B4GALT4O60513 344 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 EIF3JO75822 258 aaKnown RBP10.18□□□□□ -0.78
NUP50-217ENST00000491860 PARNO95453 639 aaKnown RBP10.18□□□□□ -0.78
NUP50-217ENST00000491860 GH1P01241 217 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 MYL3P08590 195 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 CASTP20810 708 aaKnown RBP10.18□□□□□ -0.78
NUP50-217ENST00000491860 PLA2G5P39877 138 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 GHRHRQ02643 423 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 BFSP2Q13515 415 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 QRICH1Q2TAL8 776 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 ARHGEF16Q5VV41 709 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 ZNF365Q70YC5 407 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 SYTL5Q8TDW5 730 aaPredicted RBP10.18□□□□□ -0.78
NUP50-217ENST00000491860 TIFAQ96CG3 184 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 RMDN3Q96TC7 470 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 MTA3Q9BTC8 594 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 NOC4LQ9BVI4 516 aaKnown RBP10.18□□□□□ -0.78
NUP50-217ENST00000491860 KATNAL1Q9BW62 490 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 JMJD4Q9H9V9 463 aa10.18□□□□□ -0.78
NUP50-217ENST00000491860 KLRF2D3W0D1 207 aa10.17□□□□□ -0.78
NUP50-217ENST00000491860 IFIT3O14879 490 aaKnown RBP10.17□□□□□ -0.78
NUP50-217ENST00000491860 ACTN1P12814 892 aa10.17□□□□□ -0.78
NUP50-217ENST00000491860 CHMLP26374 656 aa10.17□□□□□ -0.78
NUP50-217ENST00000491860 CYP2C18P33260 490 aa10.17□□□□□ -0.78
NUP50-217ENST00000491860 IRX5P78411 483 aaPredicted RBP10.17□□□□□ -0.78
NUP50-217ENST00000491860 WTAPQ15007 396 aa10.17□□□□□ -0.78
NUP50-217ENST00000491860 SEC23AQ15436 765 aa10.17□□□□□ -0.78
NUP50-217ENST00000491860 FAM47CQ5HY64 1035 aa10.17□□□□□ -0.78
NUP50-217ENST00000491860 RETREG2Q8NC44 543 aa10.17□□□□□ -0.78
NUP50-217ENST00000491860 EMID1Q96A84 441 aaPredicted RBP10.17□□□□□ -0.78
NUP50-217ENST00000491860 MTMR8Q96EF0 704 aa10.17□□□□□ -0.78
NUP50-217ENST00000491860 ASB2Q96Q27 587 aa10.17□□□□□ -0.78
NUP50-217ENST00000491860 PURBQ96QR8 312 aaKnown RBP10.17□□□□□ -0.78
NUP50-217ENST00000491860 GAS2L1Q99501 681 aaPredicted RBP10.17□□□□□ -0.78
NUP50-217ENST00000491860 THEGQ9P2T0 379 aa10.17□□□□□ -0.78
NUP50-217ENST00000491860 NOD1Q9Y239 953 aa10.17□□□□□ -0.78
NUP50-217ENST00000491860 GRIN2DO15399 1336 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 PALM3A6NDB9 673 aaPredicted RBP10.16□□□□□ -0.78
NUP50-217ENST00000491860 STAM2O75886 525 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 TGFB3P10600 412 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 GSPT1P15170 499 aaKnown RBP10.16□□□□□ -0.78
NUP50-217ENST00000491860 HSD17B4P51659 736 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 PSMC6P62333 389 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 LAMC2Q13753 1193 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 DGKDQ16760 1214 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 NBPF20Q3BBV1 942 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 CCDC62Q6P9F0 684 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 C16orf59Q7L2K0 433 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 CATIPQ7Z7H3 387 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 SESTD1Q86VW0 696 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 TMTC2Q8N394 836 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 CAGE1Q8TC20 777 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 TAAR1Q96RJ0 339 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 MAP3K14Q99558 947 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 TRPV6Q9H1D0 765 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 VAT1LQ9HCJ6 419 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 PXMP2Q9NR77 195 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 PCDHA1Q9Y5I3 950 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 SLC4A7Q9Y6M7 1214 aa10.16□□□□□ -0.78
NUP50-217ENST00000491860 MYO9BQ13459 2157 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 BDP1A6H8Y1 2624 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 SGSM2O43147 1006 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 CFBP00751 764 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 NR3C2P08235 984 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 CYP21A2P08686 494 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 ACRP10323 421 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 PDE4AP27815 886 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 SMARCA1P28370 1054 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 KIF5BP33176 963 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms