RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 SMPD1P17405 629 aa18.51■□□□□ 0.55
PFDN6-207ENST00000491382 GNASQ5JWF2 1037 aa18.51■□□□□ 0.55
PFDN6-207ENST00000491382 SLC39A5Q6ZMH5 540 aa18.51■□□□□ 0.55
PFDN6-207ENST00000491382 CMTR1Q8N1G2 835 aaKnown RBP18.51■□□□□ 0.55
PFDN6-207ENST00000491382 FBXL16Q8N461 479 aa18.51■□□□□ 0.55
PFDN6-207ENST00000491382 CCDC82Q8N4S0 544 aa18.51■□□□□ 0.55
PFDN6-207ENST00000491382 SCFD2Q8WU76 684 aa18.51■□□□□ 0.55
PFDN6-207ENST00000491382 BRF1Q92994 677 aa18.51■□□□□ 0.55
PFDN6-207ENST00000491382 WDR11Q9BZH6 1224 aa18.51■□□□□ 0.55
PFDN6-207ENST00000491382 GNEQ9Y223 722 aaKnown RBP18.51■□□□□ 0.55
PFDN6-207ENST00000491382 CCDC196A0A1B0GTZ2 297 aa18.5■□□□□ 0.55
PFDN6-207ENST00000491382 RBM47A0AV96 593 aaKnown RBP18.5■□□□□ 0.55
PFDN6-207ENST00000491382 HOXA13P31271 388 aaPredicted RBP18.5■□□□□ 0.55
PFDN6-207ENST00000491382 ACLYP53396 1101 aa18.5■□□□□ 0.55
PFDN6-207ENST00000491382 NKX3-2P78367 333 aa18.5■□□□□ 0.55
PFDN6-207ENST00000491382 STXBP2Q15833 593 aa18.5■□□□□ 0.55
PFDN6-207ENST00000491382 KCNA10Q16322 511 aa18.5■□□□□ 0.55
PFDN6-207ENST00000491382 DUSP28Q4G0W2 176 aa18.5■□□□□ 0.55
PFDN6-207ENST00000491382 RUFY3Q7L099 469 aa18.5■□□□□ 0.55
PFDN6-207ENST00000491382 CUL5Q93034 780 aa18.5■□□□□ 0.55
PFDN6-207ENST00000491382 PXMP2Q9NR77 195 aa18.5■□□□□ 0.55
PFDN6-207ENST00000491382 CYP46A1Q9Y6A2 500 aa18.5■□□□□ 0.55
PFDN6-207ENST00000491382 MYADML2A6NDP7 307 aa18.49■□□□□ 0.55
PFDN6-207ENST00000491382 NKRFO15226 690 aaKnown RBP eCLIP18.49■□□□□ 0.55
PFDN6-207ENST00000491382 ZEB2O60315 1214 aa18.49■□□□□ 0.55
PFDN6-207ENST00000491382 EIF2AK2P19525 551 aaKnown RBP18.49■□□□□ 0.55
PFDN6-207ENST00000491382 METAP2P50579 478 aaKnown RBP eCLIP18.49■□□□□ 0.55
PFDN6-207ENST00000491382 RTP1P59025 263 aa18.49■□□□□ 0.55
PFDN6-207ENST00000491382 APOBRQ0VD83 1088 aa18.49■□□□□ 0.55
PFDN6-207ENST00000491382 TTLL4Q14679 1199 aa18.49■□□□□ 0.55
PFDN6-207ENST00000491382 SNX17Q15036 470 aa18.49■□□□□ 0.55
PFDN6-207ENST00000491382 C1orf53Q5VUE5 145 aa18.49■□□□□ 0.55
PFDN6-207ENST00000491382 CCSAPQ6IQ19 270 aaPredicted RBP18.49■□□□□ 0.55
PFDN6-207ENST00000491382 GLT1D1Q96MS3 346 aa18.49■□□□□ 0.55
PFDN6-207ENST00000491382 TM6SF1Q9BZW5 370 aa18.49■□□□□ 0.55
PFDN6-207ENST00000491382 ZSWIM6Q9HCJ5 1215 aa18.49■□□□□ 0.55
PFDN6-207ENST00000491382 STARD7Q9NQZ5 370 aa18.49■□□□□ 0.55
PFDN6-207ENST00000491382 CNTNAP5Q8WYK1 1306 aa18.49■□□□□ 0.55
PFDN6-207ENST00000491382 DYNC1LI2O43237 492 aaPredicted RBP18.48■□□□□ 0.55
PFDN6-207ENST00000491382 ASGR1P07306 291 aa18.48■□□□□ 0.55
PFDN6-207ENST00000491382 NR3C2P08235 984 aa18.48■□□□□ 0.55
PFDN6-207ENST00000491382 FSCN1Q16658 493 aaKnown RBP18.48■□□□□ 0.55
PFDN6-207ENST00000491382 SMARCC2Q8TAQ2 1214 aa18.48■□□□□ 0.55
PFDN6-207ENST00000491382 AGXT2Q9BYV1 514 aa18.48■□□□□ 0.55
PFDN6-207ENST00000491382 PRKAG2Q9UGJ0 569 aa18.48■□□□□ 0.55
PFDN6-207ENST00000491382 ZMYND8Q9ULU4 1186 aaPredicted RBP18.48■□□□□ 0.55
PFDN6-207ENST00000491382 ATP11BQ9Y2G3 1177 aa18.48■□□□□ 0.55
PFDN6-207ENST00000491382 EIF3JO75822 258 aaKnown RBP18.47■□□□□ 0.55
PFDN6-207ENST00000491382 TXNP10599 105 aaKnown RBP18.47■□□□□ 0.55
PFDN6-207ENST00000491382 CPT1AP50416 773 aa18.47■□□□□ 0.55
PFDN6-207ENST00000491382 BRDTQ58F21 947 aaPredicted RBP18.47■□□□□ 0.55
PFDN6-207ENST00000491382 FCHSD1Q86WN1 690 aa18.47■□□□□ 0.55
PFDN6-207ENST00000491382 PDCD2LQ9BRP1 358 aa18.47■□□□□ 0.55
PFDN6-207ENST00000491382 ELP1O95163 1332 aa18.47■□□□□ 0.55
PFDN6-207ENST00000491382 NID2Q14112 1375 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 hCG_1642624A0A1W2PR95 340 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 hCG_1984214I3L0E3 225 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 PIK3CDO00329 1044 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 CTAGE5O15320 804 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 CABYRO75952 493 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 CCND2P30279 289 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 ANAPC15P60006 121 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 IRX5P78411 483 aaPredicted RBP18.46■□□□□ 0.55
PFDN6-207ENST00000491382 BEX3Q00994 111 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 PGM5Q15124 567 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 TRIM60Q495X7 471 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 SEPT14Q6ZU15 432 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 HEATR3Q7Z4Q2 680 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 ZNF713Q8N859 430 aaPredicted RBP18.46■□□□□ 0.55
PFDN6-207ENST00000491382 OR6J1Q8NGC5 347 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 VTI1AQ96AJ9 217 aa18.46■□□□□ 0.55
PFDN6-207ENST00000491382 MYCLP12524 364 aaPredicted RBP18.45■□□□□ 0.54
PFDN6-207ENST00000491382 SYN1P17600 705 aa18.45■□□□□ 0.54
PFDN6-207ENST00000491382 CDC27P30260 824 aa18.45■□□□□ 0.54
PFDN6-207ENST00000491382 FUT2Q10981 343 aa18.45■□□□□ 0.54
PFDN6-207ENST00000491382 TMEM63BQ5T3F8 832 aa18.45■□□□□ 0.54
PFDN6-207ENST00000491382 CHRDL2Q6WN34 429 aa18.45■□□□□ 0.54
PFDN6-207ENST00000491382 PSTPIP2Q9H939 334 aa18.45■□□□□ 0.54
PFDN6-207ENST00000491382 RBM27Q9P2N5 1060 aaKnown RBP18.45■□□□□ 0.54
PFDN6-207ENST00000491382 MROH7Q68CQ1 1323 aa18.45■□□□□ 0.54
PFDN6-207ENST00000491382 A0A0U1RQG5 324 aaPredicted RBP18.44■□□□□ 0.54
PFDN6-207ENST00000491382 PPP1R18Q6NYC8 613 aa18.44■□□□□ 0.54
PFDN6-207ENST00000491382 KCNV1Q6PIU1 500 aa18.44■□□□□ 0.54
PFDN6-207ENST00000491382 USP17L6PQ6QN14 398 aa18.44■□□□□ 0.54
PFDN6-207ENST00000491382 TEX2Q8IWB9 1127 aa18.44■□□□□ 0.54
PFDN6-207ENST00000491382 GPKOWQ92917 476 aaPredicted RBP eCLIP18.44■□□□□ 0.54
PFDN6-207ENST00000491382 UPF3BQ9BZI7 483 aaKnown RBP18.44■□□□□ 0.54
PFDN6-207ENST00000491382 FAM217BQ9NTX9 383 aaPredicted RBP18.44■□□□□ 0.54
PFDN6-207ENST00000491382 POLR3EQ9NVU0 708 aa18.44■□□□□ 0.54
PFDN6-207ENST00000491382 COLQQ9Y215 455 aaPredicted RBP18.44■□□□□ 0.54
PFDN6-207ENST00000491382 MRVI1Q9Y6F6 885 aa18.44■□□□□ 0.54
PFDN6-207ENST00000491382 V9GY48 417 aaPredicted RBP18.44■□□□□ 0.54
PFDN6-207ENST00000491382 FRMPD4Q14CM0 1322 aa18.44■□□□□ 0.54
PFDN6-207ENST00000491382 DNAH12Q6ZR08 3092 aa18.43■□□□□ 0.54
PFDN6-207ENST00000491382 MEIS2O14770 477 aa18.43■□□□□ 0.54
PFDN6-207ENST00000491382 STAM2O75886 525 aa18.43■□□□□ 0.54
PFDN6-207ENST00000491382 GH1P01241 217 aa18.43■□□□□ 0.54
PFDN6-207ENST00000491382 PTGS1P23219 599 aa18.43■□□□□ 0.54
PFDN6-207ENST00000491382 ADD1P35611 737 aaKnown RBP18.43■□□□□ 0.54
PFDN6-207ENST00000491382 NAPAP54920 295 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms