RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 ALX1Q15699 326 aa24.32■■□□□ 1.48
CLIP2-208ENST00000491075 VPS53Q5VIR6 699 aa24.32■■□□□ 1.48
CLIP2-208ENST00000491075 DNERQ8NFT8 737 aa24.32■■□□□ 1.48
CLIP2-208ENST00000491075 TMEM47Q9BQJ4 181 aa24.32■■□□□ 1.48
CLIP2-208ENST00000491075 GPCPD1Q9NPB8 672 aa24.32■■□□□ 1.48
CLIP2-208ENST00000491075 TET1Q8NFU7 2136 aa24.32■■□□□ 1.48
CLIP2-208ENST00000491075 TRIP12Q14669 1992 aaPredicted RBP24.31■■□□□ 1.48
CLIP2-208ENST00000491075 B4DLN1 442 aa24.31■■□□□ 1.48
CLIP2-208ENST00000491075 RFXAPO00287 272 aa24.31■■□□□ 1.48
CLIP2-208ENST00000491075 MRPL12P52815 198 aaKnown RBP24.31■■□□□ 1.48
CLIP2-208ENST00000491075 HERC6Q8IVU3 1022 aa24.31■■□□□ 1.48
CLIP2-208ENST00000491075 FTOQ9C0B1 505 aaKnown RBP eCLIP24.31■■□□□ 1.48
CLIP2-208ENST00000491075 CERS4Q9HA82 394 aa24.31■■□□□ 1.48
CLIP2-208ENST00000491075 TCP11L1Q9NUJ3 509 aa24.31■■□□□ 1.48
CLIP2-208ENST00000491075 COG5Q9UP83 839 aa24.31■■□□□ 1.48
CLIP2-208ENST00000491075 WDR19Q8NEZ3 1342 aa24.31■■□□□ 1.48
CLIP2-208ENST00000491075 KIF28PB7ZC32 967 aa24.3■■□□□ 1.48
CLIP2-208ENST00000491075 BAIAP3O94812 1187 aa24.3■■□□□ 1.48
CLIP2-208ENST00000491075 PDHBP11177 359 aa24.3■■□□□ 1.48
CLIP2-208ENST00000491075 RPS6P62753 249 aaKnown RBP24.3■■□□□ 1.48
CLIP2-208ENST00000491075 TAP1Q03518 808 aa24.3■■□□□ 1.48
CLIP2-208ENST00000491075 NOD1Q9Y239 953 aa24.3■■□□□ 1.48
CLIP2-208ENST00000491075 EPOPA6NHQ4 379 aa24.29■■□□□ 1.48
CLIP2-208ENST00000491075 RRP12Q5JTH9 1297 aaKnown RBP24.29■■□□□ 1.48
CLIP2-208ENST00000491075 ARNTL2Q8WYA1 636 aa24.29■■□□□ 1.48
CLIP2-208ENST00000491075 SALL3Q9BXA9 1300 aa24.29■■□□□ 1.48
CLIP2-208ENST00000491075 TXNP10599 105 aaKnown RBP24.28■■□□□ 1.48
CLIP2-208ENST00000491075 CCDC155Q8N6L0 562 aa24.28■■□□□ 1.48
CLIP2-208ENST00000491075 COPS5Q92905 334 aa24.28■■□□□ 1.48
CLIP2-208ENST00000491075 EVI5LQ96CN4 794 aa24.28■■□□□ 1.48
CLIP2-208ENST00000491075 FAM122AQ96E09 287 aa24.28■■□□□ 1.48
CLIP2-208ENST00000491075 HELLSQ9NRZ9 838 aa24.28■■□□□ 1.48
CLIP2-208ENST00000491075 KIAA1217Q5T5P2 1943 aa24.27■■□□□ 1.48
CLIP2-208ENST00000491075 ZNF543Q08ER8 600 aa24.27■■□□□ 1.48
CLIP2-208ENST00000491075 CAGE1Q8TC20 777 aa24.27■■□□□ 1.48
CLIP2-208ENST00000491075 PPP1R13LQ8WUF5 828 aa24.27■■□□□ 1.48
CLIP2-208ENST00000491075 ZMYM6O95789 1325 aa24.27■■□□□ 1.48
CLIP2-208ENST00000491075 ARHGEF15O94989 841 aa24.26■■□□□ 1.47
CLIP2-208ENST00000491075 FGAP02671 866 aa24.26■■□□□ 1.47
CLIP2-208ENST00000491075 KCNJ6P48051 423 aa24.26■■□□□ 1.47
CLIP2-208ENST00000491075 AFAP1L1Q8TED9 768 aa24.26■■□□□ 1.47
CLIP2-208ENST00000491075 TTC14Q96N46 770 aa24.26■■□□□ 1.47
CLIP2-208ENST00000491075 PCDHB15Q9Y5E8 787 aa24.26■■□□□ 1.47
CLIP2-208ENST00000491075 TLL1O43897 1013 aa24.25■■□□□ 1.47
CLIP2-208ENST00000491075 SNHG28P0DPA3 235 aa24.25■■□□□ 1.47
CLIP2-208ENST00000491075 PTGISQ16647 500 aa24.25■■□□□ 1.47
CLIP2-208ENST00000491075 KRT40Q6A162 431 aa24.25■■□□□ 1.47
CLIP2-208ENST00000491075 RGS22Q8NE09 1264 aa24.25■■□□□ 1.47
CLIP2-208ENST00000491075 MYH6P13533 1939 aa24.24■■□□□ 1.47
CLIP2-208ENST00000491075 ARIH2O95376 493 aa24.24■■□□□ 1.47
CLIP2-208ENST00000491075 PCP11498 1178 aaKnown RBP24.24■■□□□ 1.47
CLIP2-208ENST00000491075 GRB10Q13322 594 aa24.24■■□□□ 1.47
CLIP2-208ENST00000491075 SESTD1Q86VW0 696 aa24.24■■□□□ 1.47
CLIP2-208ENST00000491075 HLA-CQ95604 372 aa24.24■■□□□ 1.47
CLIP2-208ENST00000491075 MAF1Q9H063 256 aa24.24■■□□□ 1.47
CLIP2-208ENST00000491075 ZBTB47Q9UFB7 747 aaPredicted RBP24.24■■□□□ 1.47
CLIP2-208ENST00000491075 PARNO95453 639 aaKnown RBP24.23■■□□□ 1.47
CLIP2-208ENST00000491075 CHMP4BP1P59074 171 aa24.23■■□□□ 1.47
CLIP2-208ENST00000491075 GPATCH4Q5T3I0 446 aaKnown RBP24.23■■□□□ 1.47
CLIP2-208ENST00000491075 CCDC62Q6P9F0 684 aa24.23■■□□□ 1.47
CLIP2-208ENST00000491075 TICAM2Q86XR7 235 aa24.23■■□□□ 1.47
CLIP2-208ENST00000491075 LAMA4Q16363 1823 aa24.22■■□□□ 1.47
CLIP2-208ENST00000491075 WDR5P61964 334 aaKnown RBP24.22■■□□□ 1.47
CLIP2-208ENST00000491075 USH1GQ495M9 461 aa24.22■■□□□ 1.47
CLIP2-208ENST00000491075 MCMDC2Q4G0Z9 681 aa24.22■■□□□ 1.47
CLIP2-208ENST00000491075 AFG1LQ8WV93 481 aa24.22■■□□□ 1.47
CLIP2-208ENST00000491075 FAM227BQ96M60 508 aa24.22■■□□□ 1.47
CLIP2-208ENST00000491075 SIP14410 1827 aa24.21■■□□□ 1.47
CLIP2-208ENST00000491075 A0A0D9SFI3 127 aa24.21■■□□□ 1.47
CLIP2-208ENST00000491075 GH1P01241 217 aa24.21■■□□□ 1.47
CLIP2-208ENST00000491075 MMP3P08254 477 aa24.21■■□□□ 1.47
CLIP2-208ENST00000491075 HSPD1P10809 573 aaKnown RBP24.21■■□□□ 1.47
CLIP2-208ENST00000491075 SELPP16109 830 aa24.21■■□□□ 1.47
CLIP2-208ENST00000491075 RBL2Q08999 1139 aa24.21■■□□□ 1.47
CLIP2-208ENST00000491075 GDF6Q6KF10 455 aaPredicted RBP24.21■■□□□ 1.47
CLIP2-208ENST00000491075 MFSD6Q6ZSS7 791 aa24.21■■□□□ 1.47
CLIP2-208ENST00000491075 LRRC8DQ7L1W4 858 aa24.21■■□□□ 1.47
CLIP2-208ENST00000491075 CTAGE1Q96RT6 745 aa24.21■■□□□ 1.47
CLIP2-208ENST00000491075 LMCD1Q9NZU5 365 aa24.21■■□□□ 1.47
CLIP2-208ENST00000491075 LPXNO60711 386 aa24.2■■□□□ 1.46
CLIP2-208ENST00000491075 HAND2P61296 217 aa24.2■■□□□ 1.46
CLIP2-208ENST00000491075 ARHGAP1Q07960 439 aa24.2■■□□□ 1.46
CLIP2-208ENST00000491075 CNKSR3Q6P9H4 555 aa24.2■■□□□ 1.46
CLIP2-208ENST00000491075 ZBED2Q9BTP6 218 aa24.2■■□□□ 1.46
CLIP2-208ENST00000491075 ABCB11O95342 1321 aa24.19■■□□□ 1.46
CLIP2-208ENST00000491075 LCHNA4D1U4 455 aa24.19■■□□□ 1.46
CLIP2-208ENST00000491075 CASTP20810 708 aaKnown RBP24.19■■□□□ 1.46
CLIP2-208ENST00000491075 SPRED2Q7Z698 418 aa24.19■■□□□ 1.46
CLIP2-208ENST00000491075 NSUN6Q8TEA1 469 aaKnown RBP24.19■■□□□ 1.46
CLIP2-208ENST00000491075 RNF41Q9H4P4 317 aaPredicted RBP24.19■■□□□ 1.46
CLIP2-208ENST00000491075 HCN4Q9Y3Q4 1203 aa24.19■■□□□ 1.46
CLIP2-208ENST00000491075 ARIH1Q9Y4X5 557 aaPredicted RBP24.19■■□□□ 1.46
CLIP2-208ENST00000491075 BRWD1Q9NSI6 2320 aa24.18■■□□□ 1.46
CLIP2-208ENST00000491075 CXCL10P02778 98 aa24.18■■□□□ 1.46
CLIP2-208ENST00000491075 PDE1AP54750 535 aa24.18■■□□□ 1.46
CLIP2-208ENST00000491075 GPNMBQ14956 572 aa24.18■■□□□ 1.46
CLIP2-208ENST00000491075 LY6KQ17RY6 165 aa24.18■■□□□ 1.46
CLIP2-208ENST00000491075 SEPT14Q6ZU15 432 aa24.18■■□□□ 1.46
CLIP2-208ENST00000491075 ZNF589Q86UQ0 364 aaPredicted RBP24.18■■□□□ 1.46
CLIP2-208ENST00000491075 DHX38Q92620 1227 aaKnown RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms