RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 RUFY2Q8WXA3 655 aa23.01■■□□□ 1.27
SREBF1-216ENST00000490796 NOC4LQ9BVI4 516 aaKnown RBP23.01■■□□□ 1.27
SREBF1-216ENST00000490796 ZNF576Q9H609 170 aa23.01■■□□□ 1.27
SREBF1-216ENST00000490796 MSRAQ9UJ68 235 aa23.01■■□□□ 1.27
SREBF1-216ENST00000490796 LAMA4Q16363 1823 aa23.01■■□□□ 1.27
SREBF1-216ENST00000490796 NSUN6Q8TEA1 469 aaKnown RBP23■■□□□ 1.27
SREBF1-216ENST00000490796 UMODL1Q5DID0 1318 aa23■■□□□ 1.27
SREBF1-216ENST00000490796 QRICH1Q2TAL8 776 aa22.99■■□□□ 1.27
SREBF1-216ENST00000490796 HERVK_113Q902F9 699 aa22.99■■□□□ 1.27
SREBF1-216ENST00000490796 GRXCR1A8MXD5 290 aa22.98■■□□□ 1.27
SREBF1-216ENST00000490796 CHMP4BP1P59074 171 aa22.98■■□□□ 1.27
SREBF1-216ENST00000490796 GRIN2CQ14957 1233 aa22.98■■□□□ 1.27
SREBF1-216ENST00000490796 RAB30Q15771 203 aa22.98■■□□□ 1.27
SREBF1-216ENST00000490796 TTC22Q5TAA0 569 aa22.98■■□□□ 1.27
SREBF1-216ENST00000490796 RASIP1Q5U651 963 aa22.98■■□□□ 1.27
SREBF1-216ENST00000490796 SEPT14Q6ZU15 432 aa22.98■■□□□ 1.27
SREBF1-216ENST00000490796 OTOP2Q7RTS6 562 aa22.98■■□□□ 1.27
SREBF1-216ENST00000490796 SYTL5Q8TDW5 730 aaPredicted RBP22.98■■□□□ 1.27
SREBF1-216ENST00000490796 COPS5Q92905 334 aa22.98■■□□□ 1.27
SREBF1-216ENST00000490796 RMDN3Q96TC7 470 aa22.98■■□□□ 1.27
SREBF1-216ENST00000490796 PBX4Q9BYU1 374 aa22.98■■□□□ 1.27
SREBF1-216ENST00000490796 TRMT13Q9NUP7 481 aaKnown RBP22.98■■□□□ 1.27
SREBF1-216ENST00000490796 NOD1Q9Y239 953 aa22.98■■□□□ 1.27
SREBF1-216ENST00000490796 MYO9BQ13459 2157 aa22.97■■□□□ 1.27
SREBF1-216ENST00000490796 A6NJR5 290 aa22.97■■□□□ 1.27
SREBF1-216ENST00000490796 STXBP2Q15833 593 aa22.97■■□□□ 1.27
SREBF1-216ENST00000490796 NBPF20Q3BBV1 942 aa22.97■■□□□ 1.27
SREBF1-216ENST00000490796 ARHGEF16Q5VV41 709 aa22.97■■□□□ 1.27
SREBF1-216ENST00000490796 TBC1D5Q92609 795 aa22.97■■□□□ 1.27
SREBF1-216ENST00000490796 TAAR1Q96RJ0 339 aa22.97■■□□□ 1.27
SREBF1-216ENST00000490796 IWS1Q96ST2 819 aa22.97■■□□□ 1.27
SREBF1-216ENST00000490796 GAS2L1Q99501 681 aaPredicted RBP22.97■■□□□ 1.27
SREBF1-216ENST00000490796 JMJD4Q9H9V9 463 aa22.97■■□□□ 1.27
SREBF1-216ENST00000490796 U3KPZ7 1027 aaPredicted RBP22.97■■□□□ 1.27
SREBF1-216ENST00000490796 ERICH2A1L162 156 aa22.96■■□□□ 1.27
SREBF1-216ENST00000490796 ZBBXA8MT70 800 aa22.96■■□□□ 1.27
SREBF1-216ENST00000490796 CFBP00751 764 aa22.96■■□□□ 1.27
SREBF1-216ENST00000490796 CYP2C9P11712 490 aa22.96■■□□□ 1.27
SREBF1-216ENST00000490796 PBX2P40425 430 aa22.96■■□□□ 1.27
SREBF1-216ENST00000490796 RETREG2Q8NC44 543 aa22.96■■□□□ 1.27
SREBF1-216ENST00000490796 SCLYQ96I15 445 aa22.96■■□□□ 1.27
SREBF1-216ENST00000490796 AMNQ9BXJ7 453 aa22.96■■□□□ 1.27
SREBF1-216ENST00000490796 WNT8AQ9H1J5 351 aa22.96■■□□□ 1.27
SREBF1-216ENST00000490796 KLRF2D3W0D1 207 aa22.95■■□□□ 1.26
SREBF1-216ENST00000490796 GH1P01241 217 aa22.95■■□□□ 1.26
SREBF1-216ENST00000490796 PDE4AP27815 886 aa22.95■■□□□ 1.26
SREBF1-216ENST00000490796 NFRKBQ6P4R8 1299 aa22.95■■□□□ 1.26
SREBF1-216ENST00000490796 RALYLQ86SE5 291 aaKnown RBP22.95■■□□□ 1.26
SREBF1-216ENST00000490796 CXXC1Q9P0U4 656 aaPredicted RBP22.95■■□□□ 1.26
SREBF1-216ENST00000490796 SLC4A7Q9Y6M7 1214 aa22.95■■□□□ 1.26
SREBF1-216ENST00000490796 UNC80Q8N2C7 3258 aa22.95■■□□□ 1.26
SREBF1-216ENST00000490796 ARIH2O95376 493 aa22.94■■□□□ 1.26
SREBF1-216ENST00000490796 PFKMP08237 780 aa22.94■■□□□ 1.26
SREBF1-216ENST00000490796 GSPT1P15170 499 aaKnown RBP22.94■■□□□ 1.26
SREBF1-216ENST00000490796 EIF2AK2P19525 551 aaKnown RBP22.94■■□□□ 1.26
SREBF1-216ENST00000490796 PTPN11Q06124 597 aaPredicted RBP22.94■■□□□ 1.26
SREBF1-216ENST00000490796 CHST3Q7LGC8 479 aa22.94■■□□□ 1.26
SREBF1-216ENST00000490796 IL25Q9H293 177 aa22.94■■□□□ 1.26
SREBF1-216ENST00000490796 CDH23Q9H251 3354 aa22.93■■□□□ 1.26
SREBF1-216ENST00000490796 IFIT3O14879 490 aaKnown RBP22.93■■□□□ 1.26
SREBF1-216ENST00000490796 TRAF1Q13077 416 aa22.93■■□□□ 1.26
SREBF1-216ENST00000490796 SART3Q15020 963 aaKnown RBP22.93■■□□□ 1.26
SREBF1-216ENST00000490796 LY6KQ17RY6 165 aa22.93■■□□□ 1.26
SREBF1-216ENST00000490796 CYB5R4Q7L1T6 521 aa22.93■■□□□ 1.26
SREBF1-216ENST00000490796 DEFB128Q7Z7B8 93 aa22.93■■□□□ 1.26
SREBF1-216ENST00000490796 STAG2Q8N3U4 1231 aa22.93■■□□□ 1.26
SREBF1-216ENST00000490796 AFG1LQ8WV93 481 aa22.93■■□□□ 1.26
SREBF1-216ENST00000490796 COL25A1Q9BXS0 654 aaPredicted RBP22.93■■□□□ 1.26
SREBF1-216ENST00000490796 SLC28A3Q9HAS3 691 aa22.93■■□□□ 1.26
SREBF1-216ENST00000490796 COL20A1Q9P218 1284 aa22.93■■□□□ 1.26
SREBF1-216ENST00000490796 MYH6P13533 1939 aa22.92■■□□□ 1.26
SREBF1-216ENST00000490796 ZBTB5O15062 677 aa22.92■■□□□ 1.26
SREBF1-216ENST00000490796 EIF3JO75822 258 aaKnown RBP22.92■■□□□ 1.26
SREBF1-216ENST00000490796 ACTN1P12814 892 aa22.92■■□□□ 1.26
SREBF1-216ENST00000490796 CASTP20810 708 aaKnown RBP22.92■■□□□ 1.26
SREBF1-216ENST00000490796 BFSP2Q13515 415 aa22.92■■□□□ 1.26
SREBF1-216ENST00000490796 SEC23AQ15436 765 aa22.92■■□□□ 1.26
SREBF1-216ENST00000490796 CCDC62Q6P9F0 684 aa22.92■■□□□ 1.26
SREBF1-216ENST00000490796 HOMER1Q86YM7 354 aa22.92■■□□□ 1.26
SREBF1-216ENST00000490796 PCDHA1Q9Y5I3 950 aa22.92■■□□□ 1.26
SREBF1-216ENST00000490796 MRVI1Q9Y6F6 885 aa22.92■■□□□ 1.26
SREBF1-216ENST00000490796 NR3C2P08235 984 aa22.91■■□□□ 1.26
SREBF1-216ENST00000490796 CHMLP26374 656 aa22.91■■□□□ 1.26
SREBF1-216ENST00000490796 RFC2P35250 354 aa22.91■■□□□ 1.26
SREBF1-216ENST00000490796 IRX6P78412 446 aaPredicted RBP22.91■■□□□ 1.26
SREBF1-216ENST00000490796 CCDC155Q8N6L0 562 aa22.91■■□□□ 1.26
SREBF1-216ENST00000490796 PPP1R13LQ8WUF5 828 aa22.91■■□□□ 1.26
SREBF1-216ENST00000490796 NKX2-4Q9H2Z4 354 aa22.91■■□□□ 1.26
SREBF1-216ENST00000490796 PRDM12Q9H4Q4 367 aa22.91■■□□□ 1.26
SREBF1-216ENST00000490796 PXMP2Q9NR77 195 aa22.91■■□□□ 1.26
SREBF1-216ENST00000490796 MAD2L2Q9UI95 211 aa22.91■■□□□ 1.26
SREBF1-216ENST00000490796 MMP3P08254 477 aa22.9■■□□□ 1.26
SREBF1-216ENST00000490796 CYP21A2P08686 494 aa22.9■■□□□ 1.26
SREBF1-216ENST00000490796 WTAPQ15007 396 aa22.9■■□□□ 1.26
SREBF1-216ENST00000490796 NCOA7Q8NI08 942 aa22.9■■□□□ 1.26
SREBF1-216ENST00000490796 FTOQ9C0B1 505 aaKnown RBP eCLIP22.9■■□□□ 1.261e-6■■■■■ 30.7
SREBF1-216ENST00000490796 MAP3K20Q9NYL2 800 aaKnown RBP22.9■■□□□ 1.26
SREBF1-216ENST00000490796 SCN10AQ9Y5Y9 1956 aa22.9■■□□□ 1.26
SREBF1-216ENST00000490796 MYCLP12524 364 aaPredicted RBP22.89■■□□□ 1.25
SREBF1-216ENST00000490796 ATP2A2P16615 1042 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms