RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 SOWAHBA6NEL2 793 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 KBTBD13C9JR72 458 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 PPFIA3O75145 1194 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 MBD3O95983 291 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 PGK1P00558 417 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 GOLGA8HP0CJ92 632 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 AKR1A1P14550 325 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 NCLP19338 710 aaKnown RBP18.01■□□□□ 0.47
PCCB-218ENST00000490504 FXR1P51114 621 aaKnown RBP eCLIP18.01■□□□□ 0.47
PCCB-218ENST00000490504 FOSBP53539 338 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 PPP2R5BQ15173 497 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 NTRK3Q16288 839 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 CCDC178Q5BJE1 867 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 ARMCX2Q7L311 632 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 CATIPQ7Z7H3 387 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 IFNAR1P17181 557 aa18■□□□□ 0.47
PCCB-218ENST00000490504 ADCYAP1R1P41586 468 aa18■□□□□ 0.47
PCCB-218ENST00000490504 KRT85P78386 507 aa18■□□□□ 0.47
PCCB-218ENST00000490504 ACVR2BQ13705 512 aa18■□□□□ 0.47
PCCB-218ENST00000490504 PNMA1Q8ND90 353 aa18■□□□□ 0.47
PCCB-218ENST00000490504 FERMT2Q96AC1 680 aa18■□□□□ 0.47
PCCB-218ENST00000490504 C8orf76Q96K31 380 aa18■□□□□ 0.47
PCCB-218ENST00000490504 UBA5Q9GZZ9 404 aa18■□□□□ 0.47
PCCB-218ENST00000490504 GZF1Q9H116 711 aaPredicted RBP18■□□□□ 0.47
PCCB-218ENST00000490504 CPVLQ9H3G5 476 aa18■□□□□ 0.47
PCCB-218ENST00000490504 KAT14Q9H8E8 782 aa18■□□□□ 0.47
PCCB-218ENST00000490504 GDPD2Q9HCC8 539 aa18■□□□□ 0.47
PCCB-218ENST00000490504 CYP39A1Q9NYL5 469 aa18■□□□□ 0.47
PCCB-218ENST00000490504 FAM184BQ9ULE4 1060 aa18■□□□□ 0.47
PCCB-218ENST00000490504 ASTN1O14525 1302 aa17.99■□□□□ 0.47
PCCB-218ENST00000490504 ZNFX1Q9P2E3 1918 aaKnown RBP17.99■□□□□ 0.47
PCCB-218ENST00000490504 DDAH1O94760 285 aa17.99■□□□□ 0.47
PCCB-218ENST00000490504 CALM1P0DP23 149 aa17.99■□□□□ 0.47
PCCB-218ENST00000490504 CALM2P0DP24 149 aa17.99■□□□□ 0.47
PCCB-218ENST00000490504 CALM3P0DP25 149 aa17.99■□□□□ 0.47
PCCB-218ENST00000490504 NSMFQ6X4W1 530 aa17.99■□□□□ 0.47
PCCB-218ENST00000490504 FANCBQ8NB91 859 aa17.99■□□□□ 0.47
PCCB-218ENST00000490504 PURBQ96QR8 312 aaKnown RBP17.99■□□□□ 0.47
PCCB-218ENST00000490504 GDF15Q99988 308 aa17.99■□□□□ 0.47
PCCB-218ENST00000490504 TRIOBPQ9H2D6 2365 aa17.99■□□□□ 0.47
PCCB-218ENST00000490504 ALPK3Q96L96 1907 aa17.99■□□□□ 0.47
PCCB-218ENST00000490504 FIBPO43427 364 aa17.98■□□□□ 0.47
PCCB-218ENST00000490504 SSRP1Q08945 709 aaKnown RBP17.98■□□□□ 0.47
PCCB-218ENST00000490504 GPATCH4Q5T3I0 446 aaKnown RBP17.98■□□□□ 0.47
PCCB-218ENST00000490504 SLC39A5Q6ZMH5 540 aa17.98■□□□□ 0.47
PCCB-218ENST00000490504 GPT2Q8TD30 523 aa17.98■□□□□ 0.47
PCCB-218ENST00000490504 NUP133Q8WUM0 1156 aa17.98■□□□□ 0.47
PCCB-218ENST00000490504 KATNBL1Q9H079 304 aa17.98■□□□□ 0.47
PCCB-218ENST00000490504 ABHD16BQ9H3Z7 469 aa17.98■□□□□ 0.47
PCCB-218ENST00000490504 NFIBO00712 420 aa17.98■□□□□ 0.47
PCCB-218ENST00000490504 ADCY6O43306 1168 aa17.98■□□□□ 0.47
PCCB-218ENST00000490504 ADAMTS4O75173 837 aa17.98■□□□□ 0.47
PCCB-218ENST00000490504 RTP1P59025 263 aa17.98■□□□□ 0.47
PCCB-218ENST00000490504 BAATQ14032 418 aaPredicted RBP17.98■□□□□ 0.47
PCCB-218ENST00000490504 RNF180Q86T96 592 aa17.98■□□□□ 0.47
PCCB-218ENST00000490504 FBXO18Q8NFZ0 1043 aa17.98■□□□□ 0.47
PCCB-218ENST00000490504 PHKBQ93100 1093 aa17.98■□□□□ 0.47
PCCB-218ENST00000490504 RBM28Q9NW13 759 aaKnown RBP17.98■□□□□ 0.47
PCCB-218ENST00000490504 DNAH12Q6ZR08 3092 aa17.97■□□□□ 0.47
PCCB-218ENST00000490504 DEKP35659 375 aaKnown RBP17.97■□□□□ 0.47
PCCB-218ENST00000490504 MAGEA10P43363 369 aaPredicted RBP17.97■□□□□ 0.47
PCCB-218ENST00000490504 IRX5P78411 483 aaPredicted RBP17.97■□□□□ 0.47
PCCB-218ENST00000490504 GUCY1B3Q02153 619 aa17.97■□□□□ 0.47
PCCB-218ENST00000490504 CCDC144BQ3MJ40 725 aa17.97■□□□□ 0.47
PCCB-218ENST00000490504 TRIM22Q8IYM9 498 aa17.97■□□□□ 0.47
PCCB-218ENST00000490504 CLEC4DQ8WXI8 215 aa17.97■□□□□ 0.47
PCCB-218ENST00000490504 WASF1Q92558 559 aa17.97■□□□□ 0.47
PCCB-218ENST00000490504 ALG1Q9BT22 464 aa17.97■□□□□ 0.47
PCCB-218ENST00000490504 SLC26A6Q9BXS9 759 aa17.97■□□□□ 0.47
PCCB-218ENST00000490504 PHF24Q9UPV7 400 aa17.97■□□□□ 0.47
PCCB-218ENST00000490504 TROAPQ12815 778 aa17.96■□□□□ 0.47
PCCB-218ENST00000490504 FAM173BQ6P4H8 233 aa17.96■□□□□ 0.47
PCCB-218ENST00000490504 SCAND2PQ9GZW5 306 aaPredicted RBP17.96■□□□□ 0.47
PCCB-218ENST00000490504 ATP11BQ9Y2G3 1177 aa17.96■□□□□ 0.47
PCCB-218ENST00000490504 FRMPD3Q5JV73 1810 aa17.96■□□□□ 0.47
PCCB-218ENST00000490504 ELP1O95163 1332 aa17.95■□□□□ 0.46
PCCB-218ENST00000490504 SYNRGQ9UMZ2 1314 aa17.95■□□□□ 0.46
PCCB-218ENST00000490504 MYADML2A6NDP7 307 aa17.95■□□□□ 0.46
PCCB-218ENST00000490504 ASB14A6NK59 587 aa17.95■□□□□ 0.46
PCCB-218ENST00000490504 GADD45BO75293 160 aaPredicted RBP17.95■□□□□ 0.46
PCCB-218ENST00000490504 DUSP11O75319 330 aaKnown RBP17.95■□□□□ 0.46
PCCB-218ENST00000490504 UBE2HP62256 183 aa17.95■□□□□ 0.46
PCCB-218ENST00000490504 KLHDC9Q8NEP7 349 aa17.95■□□□□ 0.46
PCCB-218ENST00000490504 BMP8BP34820 402 aa17.94■□□□□ 0.46
PCCB-218ENST00000490504 SNX17Q15036 470 aa17.94■□□□□ 0.46
PCCB-218ENST00000490504 TRIM60Q495X7 471 aa17.94■□□□□ 0.46
PCCB-218ENST00000490504 ASPRV1Q53RT3 343 aa17.94■□□□□ 0.46
PCCB-218ENST00000490504 ATL3Q6DD88 541 aa17.94■□□□□ 0.46
PCCB-218ENST00000490504 CCSAPQ6IQ19 270 aaPredicted RBP17.94■□□□□ 0.46
PCCB-218ENST00000490504 ADGRF4Q8IZF3 695 aa17.94■□□□□ 0.46
PCCB-218ENST00000490504 PLXNA1Q9UIW2 1896 aa17.94■□□□□ 0.46
PCCB-218ENST00000490504 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.94■□□□□ 0.46
PCCB-218ENST00000490504 A0A1W2PQ45 241 aaPredicted RBP17.94■□□□□ 0.46
PCCB-218ENST00000490504 A0A1W2PQY0 241 aa17.94■□□□□ 0.46
PCCB-218ENST00000490504 PARP1P09874 1014 aaKnown RBP17.94■□□□□ 0.46
PCCB-218ENST00000490504 TRIM29Q14134 588 aa17.94■□□□□ 0.46
PCCB-218ENST00000490504 CAVIN1Q6NZI2 390 aaKnown RBP17.94■□□□□ 0.46
PCCB-218ENST00000490504 SLC30A10Q6XR72 485 aa17.94■□□□□ 0.46
PCCB-218ENST00000490504 EEPD1Q7L9B9 569 aa17.94■□□□□ 0.46
PCCB-218ENST00000490504 TSEN34Q9BSV6 310 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms