RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 PTPN11Q06124 597 aaPredicted RBP18.33■□□□□ 0.52
NUP58-213ENST00000490231 TTLL4Q14679 1199 aa18.33■□□□□ 0.52
NUP58-213ENST00000490231 IMMTQ16891 758 aaKnown RBP18.33■□□□□ 0.52
NUP58-213ENST00000490231 NBPF20Q3BBV1 942 aa18.33■□□□□ 0.52
NUP58-213ENST00000490231 NFRKBQ6P4R8 1299 aa18.33■□□□□ 0.52
NUP58-213ENST00000490231 ADGRF4Q8IZF3 695 aa18.33■□□□□ 0.52
NUP58-213ENST00000490231 USP38Q8NB14 1042 aa18.33■□□□□ 0.52
NUP58-213ENST00000490231 SYMPKQ92797 1274 aaKnown RBP18.33■□□□□ 0.52
NUP58-213ENST00000490231 VWCEQ96DN2 955 aa18.33■□□□□ 0.52
NUP58-213ENST00000490231 SCLYQ96I15 445 aa18.33■□□□□ 0.52
NUP58-213ENST00000490231 PRDM12Q9H4Q4 367 aa18.33■□□□□ 0.52
NUP58-213ENST00000490231 SLC28A3Q9HAS3 691 aa18.33■□□□□ 0.52
NUP58-213ENST00000490231 CTNNA3Q9UI47 895 aa18.33■□□□□ 0.52
NUP58-213ENST00000490231 SLC4A7Q9Y6M7 1214 aa18.33■□□□□ 0.52
NUP58-213ENST00000490231 B4E1Z4 1266 aa18.32■□□□□ 0.52
NUP58-213ENST00000490231 CYP2C9P11712 490 aa18.32■□□□□ 0.52
NUP58-213ENST00000490231 MCF2L2Q86YR7 1114 aa18.32■□□□□ 0.52
NUP58-213ENST00000490231 ENAHQ8N8S7 591 aaPredicted RBP18.32■□□□□ 0.52
NUP58-213ENST00000490231 COPS5Q92905 334 aa18.32■□□□□ 0.52
NUP58-213ENST00000490231 ZSWIM5Q9P217 1185 aa18.32■□□□□ 0.52
NUP58-213ENST00000490231 PITPNM1O00562 1244 aa18.31■□□□□ 0.52
NUP58-213ENST00000490231 ARIH2O95376 493 aa18.31■□□□□ 0.52
NUP58-213ENST00000490231 FAM47CQ5HY64 1035 aa18.31■□□□□ 0.52
NUP58-213ENST00000490231 CCDC62Q6P9F0 684 aa18.31■□□□□ 0.52
NUP58-213ENST00000490231 SYTL5Q8TDW5 730 aaPredicted RBP18.31■□□□□ 0.52
NUP58-213ENST00000490231 NSUN6Q8TEA1 469 aaKnown RBP18.31■□□□□ 0.52
NUP58-213ENST00000490231 IWS1Q96ST2 819 aa18.31■□□□□ 0.52
NUP58-213ENST00000490231 KRT23Q9C075 422 aa18.31■□□□□ 0.52
NUP58-213ENST00000490231 NKX2-4Q9H2Z4 354 aa18.31■□□□□ 0.52
NUP58-213ENST00000490231 CNNM2Q9H8M5 875 aa18.31■□□□□ 0.52
NUP58-213ENST00000490231 YBX2Q9Y2T7 364 aaKnown RBP18.31■□□□□ 0.52
NUP58-213ENST00000490231 SPTBN5Q9NRC6 3674 aaKnown RBP18.3■□□□□ 0.52
NUP58-213ENST00000490231 LAMA4Q16363 1823 aa18.3■□□□□ 0.52
NUP58-213ENST00000490231 PARP1P09874 1014 aaKnown RBP18.3■□□□□ 0.52
NUP58-213ENST00000490231 RFC2P35250 354 aa18.3■□□□□ 0.52
NUP58-213ENST00000490231 QRICH1Q2TAL8 776 aa18.3■□□□□ 0.52
NUP58-213ENST00000490231 TJAP1Q5JTD0 557 aa18.3■□□□□ 0.52
NUP58-213ENST00000490231 EXOC6Q8TAG9 804 aa18.3■□□□□ 0.52
NUP58-213ENST00000490231 TBC1D5Q92609 795 aa18.3■□□□□ 0.52
NUP58-213ENST00000490231 TAAR1Q96RJ0 339 aa18.3■□□□□ 0.52
NUP58-213ENST00000490231 MRPL11Q9Y3B7 192 aaKnown RBP18.3■□□□□ 0.52
NUP58-213ENST00000490231 PCDHA11Q9Y5I1 949 aa18.3■□□□□ 0.52
NUP58-213ENST00000490231 VCANP13611 3396 aa18.3■□□□□ 0.52
NUP58-213ENST00000490231 ZBBXA8MT70 800 aa18.29■□□□□ 0.52
NUP58-213ENST00000490231 ATP2A2P16615 1042 aaKnown RBP18.29■□□□□ 0.52
NUP58-213ENST00000490231 ADGRE1Q14246 886 aa18.29■□□□□ 0.52
NUP58-213ENST00000490231 STXBP2Q15833 593 aa18.29■□□□□ 0.52
NUP58-213ENST00000490231 FBXO11Q86XK2 927 aa18.29■□□□□ 0.52
NUP58-213ENST00000490231 UBAC1Q9BSL1 405 aa18.29■□□□□ 0.52
NUP58-213ENST00000490231 JMJD4Q9H9V9 463 aa18.29■□□□□ 0.52
NUP58-213ENST00000490231 COL20A1Q9P218 1284 aa18.29■□□□□ 0.52
NUP58-213ENST00000490231 DHX16O60231 1041 aaKnown RBP18.28■□□□□ 0.52
NUP58-213ENST00000490231 GH1P01241 217 aa18.28■□□□□ 0.52
NUP58-213ENST00000490231 IQCF3P0C7M6 154 aa18.28■□□□□ 0.52
NUP58-213ENST00000490231 ACTN1P12814 892 aa18.28■□□□□ 0.52
NUP58-213ENST00000490231 RABGGTBP53611 331 aa18.28■□□□□ 0.52
NUP58-213ENST00000490231 DEFB128Q7Z7B8 93 aa18.28■□□□□ 0.52
NUP58-213ENST00000490231 RETREG2Q8NC44 543 aa18.28■□□□□ 0.52
NUP58-213ENST00000490231 RMDN3Q96TC7 470 aa18.28■□□□□ 0.52
NUP58-213ENST00000490231 PRUNE2Q8WUY3 3088 aa18.28■□□□□ 0.52
NUP58-213ENST00000490231 CHD9Q3L8U1 2897 aa18.28■□□□□ 0.52
NUP58-213ENST00000490231 MMP3P08254 477 aa18.27■□□□□ 0.52
NUP58-213ENST00000490231 ARHGAP1Q07960 439 aa18.27■□□□□ 0.52
NUP58-213ENST00000490231 BFSP2Q13515 415 aa18.27■□□□□ 0.52
NUP58-213ENST00000490231 LY6KQ17RY6 165 aa18.27■□□□□ 0.52
NUP58-213ENST00000490231 IFIT1BQ5T764 474 aaKnown RBP18.27■□□□□ 0.52
NUP58-213ENST00000490231 PPP2R2DQ66LE6 453 aa18.27■□□□□ 0.52
NUP58-213ENST00000490231 SEPT14Q6ZU15 432 aa18.27■□□□□ 0.52
NUP58-213ENST00000490231 SESTD1Q86VW0 696 aa18.27■□□□□ 0.52
NUP58-213ENST00000490231 AFG1LQ8WV93 481 aa18.27■□□□□ 0.52
NUP58-213ENST00000490231 ATXN2LQ8WWM7 1075 aaKnown RBP18.27■□□□□ 0.52
NUP58-213ENST00000490231 NOD1Q9Y239 953 aa18.27■□□□□ 0.52
NUP58-213ENST00000490231 SCN10AQ9Y5Y9 1956 aa18.27■□□□□ 0.52
NUP58-213ENST00000490231 CASTP20810 708 aaKnown RBP18.26■□□□□ 0.51
NUP58-213ENST00000490231 IGFBP4P22692 258 aa18.26■□□□□ 0.51
NUP58-213ENST00000490231 GHRHRQ02643 423 aa18.26■□□□□ 0.51
NUP58-213ENST00000490231 ARHGEF16Q5VV41 709 aa18.26■□□□□ 0.51
NUP58-213ENST00000490231 PHOSPHO2Q8TCD6 241 aa18.26■□□□□ 0.51
NUP58-213ENST00000490231 PPP1R13LQ8WUF5 828 aa18.26■□□□□ 0.51
NUP58-213ENST00000490231 PPM1EQ8WY54 764 aa18.26■□□□□ 0.51
NUP58-213ENST00000490231 EMID1Q96A84 441 aaPredicted RBP18.26■□□□□ 0.51
NUP58-213ENST00000490231 YTHDC1Q96MU7 727 aaKnown RBP18.26■□□□□ 0.51
NUP58-213ENST00000490231 SLC9A7Q96T83 725 aa18.26■□□□□ 0.51
NUP58-213ENST00000490231 AMNQ9BXJ7 453 aa18.26■□□□□ 0.51
NUP58-213ENST00000490231 IL25Q9H293 177 aa18.26■□□□□ 0.51
NUP58-213ENST00000490231 VAT1LQ9HCJ6 419 aa18.26■□□□□ 0.51
NUP58-213ENST00000490231 PRDM6Q9NQX0 595 aa18.26■□□□□ 0.51
NUP58-213ENST00000490231 MAP3K20Q9NYL2 800 aaKnown RBP18.26■□□□□ 0.51
NUP58-213ENST00000490231 EIF3JO75822 258 aaKnown RBP18.25■□□□□ 0.51
NUP58-213ENST00000490231 MYOGP15173 224 aa18.25■□□□□ 0.51
NUP58-213ENST00000490231 HSD17B4P51659 736 aa18.25■□□□□ 0.51
NUP58-213ENST00000490231 SEC23AQ15436 765 aa18.25■□□□□ 0.51
NUP58-213ENST00000490231 PTGISQ16647 500 aa18.25■□□□□ 0.51
NUP58-213ENST00000490231 TMEM67Q5HYA8 995 aa18.25■□□□□ 0.51
NUP58-213ENST00000490231 STAG2Q8N3U4 1231 aa18.25■□□□□ 0.51
NUP58-213ENST00000490231 CCDC155Q8N6L0 562 aa18.25■□□□□ 0.51
NUP58-213ENST00000490231 CAGE1Q8TC20 777 aa18.25■□□□□ 0.51
NUP58-213ENST00000490231 KAT2BQ92831 832 aa18.25■□□□□ 0.51
NUP58-213ENST00000490231 MTMR8Q96EF0 704 aa18.25■□□□□ 0.51
NUP58-213ENST00000490231 PXMP2Q9NR77 195 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms