RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 RCSD1Q6JBY9 416 aa9.72□□□□□ -0.85
USP39-216ENST00000490193 KIAA1211Q6ZU35 1233 aa9.72□□□□□ -0.85
USP39-216ENST00000490193 MICALL1Q8N3F8 863 aa9.72□□□□□ -0.85
USP39-216ENST00000490193 NACAP1Q9BZK3 213 aa9.72□□□□□ -0.85
USP39-216ENST00000490193 TRMT13Q9NUP7 481 aaKnown RBP9.72□□□□□ -0.85
USP39-216ENST00000490193 ADD3Q9UEY8 706 aaKnown RBP9.72□□□□□ -0.85
USP39-216ENST00000490193 PRR12Q9ULL5 1215 aa9.72□□□□□ -0.85
USP39-216ENST00000490193 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.72□□□□□ -0.85
USP39-216ENST00000490193 DDX49Q9Y6V7 483 aaKnown RBP9.72□□□□□ -0.85
USP39-216ENST00000490193 EPOPA6NHQ4 379 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 TLL1O43897 1013 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 SMARCA5O60264 1052 aaPredicted RBP9.71□□□□□ -0.86
USP39-216ENST00000490193 APPP05067 770 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 SLC3A2P08195 630 aaKnown RBP9.71□□□□□ -0.86
USP39-216ENST00000490193 CYP2C9P11712 490 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 MCCP23508 829 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 ALDH5A1P51649 535 aaPredicted RBP9.71□□□□□ -0.86
USP39-216ENST00000490193 TAP1Q03518 808 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 PTPN11Q06124 597 aaPredicted RBP9.71□□□□□ -0.86
USP39-216ENST00000490193 PPARAQ07869 468 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 LRRFIP1Q32MZ4 808 aaKnown RBP9.71□□□□□ -0.86
USP39-216ENST00000490193 NFRKBQ6P4R8 1299 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 BTNL9Q6UXG8 535 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 KCTD1Q719H9 257 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 EEPD1Q7L9B9 569 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 GPATCH3Q96I76 525 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 MTG1Q9BT17 334 aaPredicted RBP9.71□□□□□ -0.86
USP39-216ENST00000490193 LRFN3Q9BTN0 628 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 WDR11Q9BZH6 1224 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 RANBP17Q9H2T7 1088 aaKnown RBP9.71□□□□□ -0.86
USP39-216ENST00000490193 CCPG1Q9ULG6 757 aa9.71□□□□□ -0.86
USP39-216ENST00000490193 TRIP12Q14669 1992 aaPredicted RBP9.71□□□□□ -0.86
USP39-216ENST00000490193 BRWD1Q9NSI6 2320 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 A6NJR5 290 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 RFXAPO00287 272 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 NKRFO15226 690 aaKnown RBP eCLIP9.7□□□□□ -0.86
USP39-216ENST00000490193 KPNA6O60684 536 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 BAIAP3O94812 1187 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 ARHGEF15O94989 841 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 IQCF3P0C7M6 154 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 SKIV2LQ15477 1246 aaKnown RBP9.7□□□□□ -0.86
USP39-216ENST00000490193 NBPF20Q3BBV1 942 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 NSMFQ6X4W1 530 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 DEFB128Q7Z7B8 93 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 HERC6Q8IVU3 1022 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 SPOCK2Q92563 424 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 PURBQ96QR8 312 aaKnown RBP9.7□□□□□ -0.86
USP39-216ENST00000490193 NAPBQ9H115 298 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 IL17RBQ9NRM6 502 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 LMCD1Q9NZU5 365 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 ISY1Q9ULR0 285 aaKnown RBP9.7□□□□□ -0.86
USP39-216ENST00000490193 STX8Q9UNK0 236 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 RAD50Q92878 1312 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 SIP14410 1827 aa9.7□□□□□ -0.86
USP39-216ENST00000490193 KIF28PB7ZC32 967 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 NFIBO00712 420 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 FOXP2O15409 715 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 LPXNO60711 386 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 GPR37L1O60883 481 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 EDNRBP24530 442 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 SNAP25P60880 206 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 BFSP2Q13515 415 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 BAATQ14032 418 aaPredicted RBP9.69□□□□□ -0.86
USP39-216ENST00000490193 BRDTQ58F21 947 aaPredicted RBP9.69□□□□□ -0.86
USP39-216ENST00000490193 ZMYM1Q5SVZ6 1142 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 TTC41PQ6P2S7 1318 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 RASGRP2Q7LDG7 609 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 OR6J1Q8NGC5 347 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 DCAF4Q8WV16 495 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 HLA-CQ95604 372 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 EPHX3Q9H6B9 360 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 DCTPP1Q9H773 170 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 GPHNQ9NQX3 736 aaPredicted RBP9.69□□□□□ -0.86
USP39-216ENST00000490193 ANAPC4Q9UJX5 808 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 PNMA2Q9UL42 364 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 HCN4Q9Y3Q4 1203 aa9.69□□□□□ -0.86
USP39-216ENST00000490193 KIAA1217Q5T5P2 1943 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 TSPY2A6NKD2 308 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 NMT2O60551 498 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 MYL3P08590 195 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 FGRP09769 529 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 RBL2Q08999 1139 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 GRB10Q13322 594 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 PPP2R5BQ15173 497 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 FAM47CQ5HY64 1035 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 TMEM31Q5JXX7 168 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 TSHZ3Q63HK5 1081 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 KRT40Q6A162 431 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 RETREG2Q8NC44 543 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 DNERQ8NFT8 737 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 AFAP1L1Q8TED9 768 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 SCFD2Q8WU76 684 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 CLEC4DQ8WXI8 215 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 ARNTL2Q8WYA1 636 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 SEC62Q99442 399 aaKnown RBP9.68□□□□□ -0.86
USP39-216ENST00000490193 CERS4Q9HA82 394 aa9.68□□□□□ -0.86
USP39-216ENST00000490193 PIEZO1Q92508 2521 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 WDR19Q8NEZ3 1342 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 ORC4O43929 436 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 PARNO95453 639 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms