RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 GARTP22102 1010 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 PTPREP23469 700 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 ZAP70P43403 619 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 NEK3P51956 506 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 GEMIN4P57678 1058 aaKnown RBP5.28□□□□□ -1.56
RTN1-207ENST00000490111 MAP3K10Q02779 954 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 PUS10Q3MIT2 529 aaKnown RBP5.28□□□□□ -1.56
RTN1-207ENST00000490111 HSP90AB3PQ58FF7 597 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 PERM1Q5SV97 790 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 ANO1Q5XXA6 986 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 IL31Q6EBC2 164 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 TTLL5Q6EMB2 1281 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 BRICD5Q6PL45 260 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 CCDC81Q6ZN84 652 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 SPATC1Q76KD6 591 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 COPS6Q7L5N1 327 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 ERO1BQ86YB8 467 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 CREBRFQ8IUR6 639 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 CPXCR1Q8N123 301 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 ANKRD42Q8N9B4 389 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 ATL2Q8NHH9 583 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.28□□□□□ -1.56
RTN1-207ENST00000490111 RIN3Q8TB24 985 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 XAGE3Q8WTP9 111 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 KHSRPQ92945 711 aaKnown RBP eCLIP5.28□□□□□ -1.56
RTN1-207ENST00000490111 ERP27Q96DN0 273 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 HOOK2Q96ED9 719 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 TRMT2BQ96GJ1 504 aaKnown RBP5.28□□□□□ -1.56
RTN1-207ENST00000490111 RHOVQ96L33 236 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 FBXL18Q96ME1 805 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 EVA1BQ9NVM1 165 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 POLG2Q9UHN1 485 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 PFDN2Q9UHV9 154 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 TSPYL4Q9UJ04 414 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 PRUNE2Q8WUY3 3088 aa5.28□□□□□ -1.56
RTN1-207ENST00000490111 ECM29Q5VYK3 1845 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 XDHP47989 1333 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 LAMA2P24043 3122 aaKnown RBP5.27□□□□□ -1.57
RTN1-207ENST00000490111 MINDY4BA8MYZ0 360 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 GREM1O60565 184 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 HIP1RO75146 1068 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 EYA4O95677 639 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 HMGCRP04035 888 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 SERPINB3P29508 390 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 GBP2P32456 591 aaPredicted RBP5.27□□□□□ -1.57
RTN1-207ENST00000490111 SARSP49591 514 aaKnown RBP5.27□□□□□ -1.57
RTN1-207ENST00000490111 DGKGP49619 791 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 KCNQ1P51787 676 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 PPIL2Q13356 520 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 MTMR1Q13613 665 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 SEPT6Q14141 434 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 LONRF1Q17RB8 773 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 TMEM67Q5HYA8 995 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 C1QTNF12Q5T7M4 302 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 WWC2Q6AWC2 1192 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 CC2D1AQ6P1N0 951 aaPredicted RBP5.27□□□□□ -1.57
RTN1-207ENST00000490111 FBXL19Q6PCT2 694 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 SH3RF1Q7Z6J0 888 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 RELL1Q8IUW5 271 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 TTC30BQ8N4P2 665 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 ENAHQ8N8S7 591 aaPredicted RBP5.27□□□□□ -1.57
RTN1-207ENST00000490111 ZSWIM2Q8NEG5 633 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 CHMP4CQ96CF2 233 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 FAM89AQ96GI7 184 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 PRMT6Q96LA8 375 aaPredicted RBP5.27□□□□□ -1.57
RTN1-207ENST00000490111 STRBPQ96SI9 672 aaKnown RBP5.27□□□□□ -1.57
RTN1-207ENST00000490111 SMAD5Q99717 465 aaKnown RBP5.27□□□□□ -1.57
RTN1-207ENST00000490111 TRIM56Q9BRZ2 755 aaKnown RBP5.27□□□□□ -1.57
RTN1-207ENST00000490111 SARGQ9BW04 601 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 COA1Q9GZY4 146 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 OBP2AQ9NY56 170 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 CLIC5Q9NZA1 410 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 USP25Q9UHP3 1055 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 ZMYM5Q9UJ78 669 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 PPT2Q9UMR5 302 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 NOL7Q9UMY1 257 aaKnown RBP5.27□□□□□ -1.57
RTN1-207ENST00000490111 MAPRE3Q9UPY8 281 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 SALL2Q9Y467 1007 aaPredicted RBP5.27□□□□□ -1.57
RTN1-207ENST00000490111 PCDHAC2Q9Y5I4 1007 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 SNCAIPQ9Y6H5 919 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 MUC6Q6W4X9 2439 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 LTBP2Q14767 1821 aa5.27□□□□□ -1.57
RTN1-207ENST00000490111 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.26□□□□□ -1.57
RTN1-207ENST00000490111 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.26□□□□□ -1.57
RTN1-207ENST00000490111 A6NHS1 94 aa5.26□□□□□ -1.57
RTN1-207ENST00000490111 PRSS47A8MTI9 375 aa5.26□□□□□ -1.57
RTN1-207ENST00000490111 ATMINO43313 823 aaPredicted RBP5.26□□□□□ -1.57
RTN1-207ENST00000490111 GALR2O43603 387 aaPredicted RBP5.26□□□□□ -1.57
RTN1-207ENST00000490111 HTATSF1O43719 755 aaKnown RBP5.26□□□□□ -1.57
RTN1-207ENST00000490111 PIP5K1CO60331 668 aa5.26□□□□□ -1.57
RTN1-207ENST00000490111 TNFRSF21O75509 655 aa5.26□□□□□ -1.57
RTN1-207ENST00000490111 RFPL1O75677 317 aa5.26□□□□□ -1.57
RTN1-207ENST00000490111 RFPL3O75679 317 aa5.26□□□□□ -1.57
RTN1-207ENST00000490111 KRT37O76014 449 aa5.26□□□□□ -1.57
RTN1-207ENST00000490111 GJB6O95452 261 aa5.26□□□□□ -1.57
RTN1-207ENST00000490111 CYP2C8P10632 490 aa5.26□□□□□ -1.57
RTN1-207ENST00000490111 HALP42357 657 aa5.26□□□□□ -1.57
RTN1-207ENST00000490111 GIPRP48546 466 aa5.26□□□□□ -1.57
RTN1-207ENST00000490111 GDF10P55107 478 aa5.26□□□□□ -1.57
RTN1-207ENST00000490111 RIPK4P57078 832 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms