RNA–Protein interactions for RNA: ENST00000489661.5

PRDM15-213, Transcript of PR/SET domain 15, humanhuman

TSL 3

Gene PRDM15, Length 856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-213ENST00000489661 HMGB1P09429 215 aaKnown RBP16.72■□□□□ 0.27
PRDM15-213ENST00000489661 POLR2MP0CAP2 368 aa16.72■□□□□ 0.27
PRDM15-213ENST00000489661 EDNRBP24530 442 aa16.72■□□□□ 0.27
PRDM15-213ENST00000489661 FXR1P51114 621 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRDM15-213ENST00000489661 ERICH6BQ5W0A0 696 aa16.72■□□□□ 0.27
PRDM15-213ENST00000489661 CCSAPQ6IQ19 270 aaPredicted RBP16.72■□□□□ 0.27
PRDM15-213ENST00000489661 TDHQ8IZJ6 230 aa16.72■□□□□ 0.27
PRDM15-213ENST00000489661 TOX2Q96NM4 488 aa16.72■□□□□ 0.27
PRDM15-213ENST00000489661 TAAR1Q96RJ0 339 aa16.72■□□□□ 0.27
PRDM15-213ENST00000489661 MYL10Q9BUA6 226 aa16.72■□□□□ 0.27
PRDM15-213ENST00000489661 LRRC2Q9BYS8 371 aa16.72■□□□□ 0.27
PRDM15-213ENST00000489661 PPP4R2Q9NY27 417 aa16.72■□□□□ 0.27
PRDM15-213ENST00000489661 TXNP10599 105 aaKnown RBP16.71■□□□□ 0.27
PRDM15-213ENST00000489661 RAG1P15918 1043 aa16.71■□□□□ 0.27
PRDM15-213ENST00000489661 EIF2AK2P19525 551 aaKnown RBP16.71■□□□□ 0.27
PRDM15-213ENST00000489661 SEPT14Q6ZU15 432 aa16.71■□□□□ 0.27
PRDM15-213ENST00000489661 TBC1D5Q92609 795 aa16.71■□□□□ 0.27
PRDM15-213ENST00000489661 CUL5Q93034 780 aa16.71■□□□□ 0.27
PRDM15-213ENST00000489661 SPZ1Q9BXG8 430 aa16.71■□□□□ 0.27
PRDM15-213ENST00000489661 SEZ6LQ9BYH1 1024 aa16.71■□□□□ 0.27
PRDM15-213ENST00000489661 PDLIM7Q9NR12 457 aa16.71■□□□□ 0.27
PRDM15-213ENST00000489661 POLR3EQ9NVU0 708 aa16.71■□□□□ 0.27
PRDM15-213ENST00000489661 RBM47A0AV96 593 aaKnown RBP16.7■□□□□ 0.26
PRDM15-213ENST00000489661 ARVCFO00192 962 aa16.7■□□□□ 0.26
PRDM15-213ENST00000489661 SMARCA1P28370 1054 aa16.7■□□□□ 0.26
PRDM15-213ENST00000489661 HSD17B4P51659 736 aa16.7■□□□□ 0.26
PRDM15-213ENST00000489661 NKX3-2P78367 333 aa16.7■□□□□ 0.26
PRDM15-213ENST00000489661 IRX5P78411 483 aaPredicted RBP16.7■□□□□ 0.26
PRDM15-213ENST00000489661 CXCL17Q6UXB2 119 aa16.7■□□□□ 0.26
PRDM15-213ENST00000489661 DHX32Q7L7V1 743 aaKnown RBP16.7■□□□□ 0.26
PRDM15-213ENST00000489661 ANKRD33Q7Z3H0 272 aa16.7■□□□□ 0.26
PRDM15-213ENST00000489661 MICU3Q86XE3 530 aa16.7■□□□□ 0.26
PRDM15-213ENST00000489661 PXMP2Q9NR77 195 aa16.7■□□□□ 0.26
PRDM15-213ENST00000489661 NAP1L2Q9ULW6 460 aaPredicted RBP16.7■□□□□ 0.26
PRDM15-213ENST00000489661 LCTP09848 1927 aa16.69■□□□□ 0.26
PRDM15-213ENST00000489661 CYTH3O43739 400 aa16.69■□□□□ 0.26
PRDM15-213ENST00000489661 KPNA6O60684 536 aa16.69■□□□□ 0.26
PRDM15-213ENST00000489661 PPP1R11O60927 126 aaPredicted RBP16.69■□□□□ 0.26
PRDM15-213ENST00000489661 EIF3JO75822 258 aaKnown RBP16.69■□□□□ 0.26
PRDM15-213ENST00000489661 MYL3P08590 195 aa16.69■□□□□ 0.26
PRDM15-213ENST00000489661 MYCLP12524 364 aaPredicted RBP16.69■□□□□ 0.26
PRDM15-213ENST00000489661 HOXA13P31271 388 aaPredicted RBP16.69■□□□□ 0.26
PRDM15-213ENST00000489661 TSGA10IPQ3SY00 556 aa16.69■□□□□ 0.26
PRDM15-213ENST00000489661 LRRC37A2A6NM11 1700 aa16.69■□□□□ 0.26
PRDM15-213ENST00000489661 CTAGE5O15320 804 aa16.68■□□□□ 0.26
PRDM15-213ENST00000489661 NR3C2P08235 984 aa16.68■□□□□ 0.26
PRDM15-213ENST00000489661 RXRAP19793 462 aa16.68■□□□□ 0.26
PRDM15-213ENST00000489661 ITGA7Q13683 1181 aa16.68■□□□□ 0.26
PRDM15-213ENST00000489661 SGMS1Q86VZ5 419 aa16.68■□□□□ 0.26
PRDM15-213ENST00000489661 FCHSD1Q86WN1 690 aa16.68■□□□□ 0.26
PRDM15-213ENST00000489661 FANCBQ8NB91 859 aa16.68■□□□□ 0.26
PRDM15-213ENST00000489661 BADQ92934 168 aa16.68■□□□□ 0.26
PRDM15-213ENST00000489661 RBM28Q9NW13 759 aaKnown RBP16.68■□□□□ 0.26
PRDM15-213ENST00000489661 COL20A1Q9P218 1284 aa16.68■□□□□ 0.26
PRDM15-213ENST00000489661 MRVI1Q9Y6F6 885 aa16.68■□□□□ 0.26
PRDM15-213ENST00000489661 BAZ2BQ9UIF8 2168 aaKnown RBP16.67■□□□□ 0.26
PRDM15-213ENST00000489661 TRIM43BA6NCK2 446 aa16.67■□□□□ 0.26
PRDM15-213ENST00000489661 KIAA0355O15063 1070 aa16.67■□□□□ 0.26
PRDM15-213ENST00000489661 ZBTB43O43298 467 aa16.67■□□□□ 0.26
PRDM15-213ENST00000489661 GH1P01241 217 aa16.67■□□□□ 0.26
PRDM15-213ENST00000489661 CCND2P30279 289 aa16.67■□□□□ 0.26
PRDM15-213ENST00000489661 FAAP100Q0VG06 881 aa16.67■□□□□ 0.26
PRDM15-213ENST00000489661 SH3RF1Q7Z6J0 888 aa16.67■□□□□ 0.26
PRDM15-213ENST00000489661 RAB11FIP4Q86YS3 637 aa16.67■□□□□ 0.26
PRDM15-213ENST00000489661 CCDC82Q8N4S0 544 aa16.67■□□□□ 0.26
PRDM15-213ENST00000489661 SMARCC2Q8TAQ2 1214 aa16.67■□□□□ 0.26
PRDM15-213ENST00000489661 TRIM43Q96BQ3 446 aaPredicted RBP16.67■□□□□ 0.26
PRDM15-213ENST00000489661 MTG1Q9BT17 334 aaPredicted RBP16.67■□□□□ 0.26
PRDM15-213ENST00000489661 PLEKHA8P1O95397 391 aa16.66■□□□□ 0.26
PRDM15-213ENST00000489661 PTGS1P23219 599 aa16.66■□□□□ 0.26
PRDM15-213ENST00000489661 PSMA5P28066 241 aa16.66■□□□□ 0.26
PRDM15-213ENST00000489661 CDK7P50613 346 aa16.66■□□□□ 0.26
PRDM15-213ENST00000489661 GHRHRQ02643 423 aa16.66■□□□□ 0.26
PRDM15-213ENST00000489661 RTN1Q16799 776 aa16.66■□□□□ 0.26
PRDM15-213ENST00000489661 SLC35G1Q2M3R5 365 aa16.66■□□□□ 0.26
PRDM15-213ENST00000489661 TMEM63BQ5T3F8 832 aa16.66■□□□□ 0.26
PRDM15-213ENST00000489661 KCNV1Q6PIU1 500 aa16.66■□□□□ 0.26
PRDM15-213ENST00000489661 BLOC1S2Q6QNY1 142 aa16.66■□□□□ 0.26
PRDM15-213ENST00000489661 RASEFQ8IZ41 740 aa16.66■□□□□ 0.26
PRDM15-213ENST00000489661 SRBD1Q8N5C6 995 aaKnown RBP16.66■□□□□ 0.26
PRDM15-213ENST00000489661 JAKMIP1Q96N16 626 aaKnown RBP16.66■□□□□ 0.26
PRDM15-213ENST00000489661 OPLAHO14841 1288 aa16.65■□□□□ 0.26
PRDM15-213ENST00000489661 CHMP4BP1P59074 171 aa16.65■□□□□ 0.26
PRDM15-213ENST00000489661 EXOSC10Q01780 885 aaKnown RBP16.65■□□□□ 0.26
PRDM15-213ENST00000489661 FPGSQ05932 587 aa16.65■□□□□ 0.26
PRDM15-213ENST00000489661 LY6KQ17RY6 165 aa16.65■□□□□ 0.26
PRDM15-213ENST00000489661 ADCK5Q3MIX3 580 aa16.65■□□□□ 0.26
PRDM15-213ENST00000489661 LRIT3Q3SXY7 679 aa16.65■□□□□ 0.26
PRDM15-213ENST00000489661 APOA5Q6Q788 366 aa16.65■□□□□ 0.26
PRDM15-213ENST00000489661 TMTC3Q6ZXV5 915 aa16.65■□□□□ 0.26
PRDM15-213ENST00000489661 CMTR1Q8N1G2 835 aaKnown RBP16.65■□□□□ 0.26
PRDM15-213ENST00000489661 COPS5Q92905 334 aa16.65■□□□□ 0.26
PRDM15-213ENST00000489661 TCEANC2Q96MN5 208 aa16.65■□□□□ 0.26
PRDM15-213ENST00000489661 PDCD2LQ9BRP1 358 aa16.65■□□□□ 0.26
PRDM15-213ENST00000489661 PCDH10Q9P2E7 1040 aa16.65■□□□□ 0.26
PRDM15-213ENST00000489661 KLF18A0A0U1RQI7 1052 aa16.64■□□□□ 0.25
PRDM15-213ENST00000489661 CCDC196A0A1B0GTZ2 297 aa16.64■□□□□ 0.25
PRDM15-213ENST00000489661 GOLGA8AA7E2F4 631 aa16.64■□□□□ 0.25
PRDM15-213ENST00000489661 GOLGA8BA8MQT2 603 aa16.64■□□□□ 0.25
PRDM15-213ENST00000489661 TIMP1P01033 207 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms