RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 RBM27Q9P2N5 1060 aaKnown RBP9.52□□□□□ -0.89
SF1-218ENST00000489544 DIS3Q9Y2L1 958 aaKnown RBP9.52□□□□□ -0.89
SF1-218ENST00000489544 hCG_1984214I3L0E3 225 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 PIK3CDO00329 1044 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 MYCLP12524 364 aaPredicted RBP9.51□□□□□ -0.89
SF1-218ENST00000489544 GJB2P29033 226 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 CUL4AQ13619 759 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 ARHGEF16Q5VV41 709 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 MFSD14CQ5VZR4 134 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 OLFML2BQ68BL8 750 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 PPP1R18Q6NYC8 613 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 MAMDC4Q6UXC1 1216 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 FBXO16Q8IX29 292 aaPredicted RBP9.51□□□□□ -0.89
SF1-218ENST00000489544 ZNF713Q8N859 430 aaPredicted RBP9.51□□□□□ -0.89
SF1-218ENST00000489544 SPRYD3Q8NCJ5 442 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 SNX21Q969T3 373 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 LENG1Q96BZ8 264 aaPredicted RBP9.51□□□□□ -0.89
SF1-218ENST00000489544 ZNF333Q96JL9 665 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 LLPHQ9BRT6 129 aaKnown RBP9.51□□□□□ -0.89
SF1-218ENST00000489544 ZMYND12Q9H0C1 365 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 UNC93B1Q9H1C4 597 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 PXMP2Q9NR77 195 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 PDGFCQ9NRA1 345 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 ZHX1Q9UKY1 873 aaPredicted RBP9.51□□□□□ -0.89
SF1-218ENST00000489544 PCDHA6Q9UN73 950 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 PCDHA8Q9Y5H6 950 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 CENPFP49454 3210 aa9.51□□□□□ -0.89
SF1-218ENST00000489544 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.5□□□□□ -0.89
SF1-218ENST00000489544 ESYT2A0FGR8 921 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 NR3C2P08235 984 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 ZNF865P0CJ78 1059 aaPredicted RBP9.5□□□□□ -0.89
SF1-218ENST00000489544 CYBAP13498 195 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 CCL5P13501 91 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 EDNRBP24530 442 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 CNGA1P29973 690 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 CLK2P49760 499 aaKnown RBP9.5□□□□□ -0.89
SF1-218ENST00000489544 MRPL12P52815 198 aaKnown RBP9.5□□□□□ -0.89
SF1-218ENST00000489544 MAP3K21Q5TCX8 1036 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 KRT40Q6A162 431 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 ZNF467Q7Z7K2 595 aaPredicted RBP9.5□□□□□ -0.89
SF1-218ENST00000489544 HSCBQ8IWL3 235 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 FAM184AQ8NB25 1140 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 IL27Q8NEV9 243 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 NSUN6Q8TEA1 469 aaKnown RBP9.5□□□□□ -0.89
SF1-218ENST00000489544 ARMC5Q96C12 935 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 PDCD2LQ9BRP1 358 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 PHF20Q9BVI0 1012 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 ANO3Q9BYT9 981 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 KATNBL1Q9H079 304 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 C6orf50Q9HD87 102 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 SH3GLB2Q9NR46 395 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 RTEL1Q9NZ71 1219 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 ADD3Q9UEY8 706 aaKnown RBP9.5□□□□□ -0.89
SF1-218ENST00000489544 PLXNA1Q9UIW2 1896 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 RPTORQ8N122 1335 aa9.5□□□□□ -0.89
SF1-218ENST00000489544 FAM205CA6NFA0 338 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 ASB14A6NK59 587 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 SPDYE3A6NKU9 549 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 ADCY6O43306 1168 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 GNA11P29992 359 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 ADCYAP1R1P41586 468 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 IRX5P78411 483 aaPredicted RBP9.49□□□□□ -0.89
SF1-218ENST00000489544 MRPS9P82933 396 aaKnown RBP9.49□□□□□ -0.89
SF1-218ENST00000489544 HMGN5P82970 282 aaKnown RBP9.49□□□□□ -0.89
SF1-218ENST00000489544 PDE4DQ08499 809 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 NR5A1Q13285 461 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 ACVR2BQ13705 512 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 PGM5Q15124 567 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 EARS2Q5JPH6 523 aaKnown RBP9.49□□□□□ -0.89
SF1-218ENST00000489544 GJC2Q5T442 439 aaPredicted RBP9.49□□□□□ -0.89
SF1-218ENST00000489544 SEPT14Q6ZU15 432 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 TRMT44Q8IYL2 757 aaKnown RBP9.49□□□□□ -0.89
SF1-218ENST00000489544 BLIDQ8IZY5 108 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 REXO1Q8N1G1 1221 aaKnown RBP9.49□□□□□ -0.89
SF1-218ENST00000489544 CCDC148Q8NFR7 591 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 DNERQ8NFT8 737 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 MORC4Q8TE76 937 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 CCDC12Q8WUD4 166 aaPredicted RBP9.49□□□□□ -0.89
SF1-218ENST00000489544 WASF1Q92558 559 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 C8orf76Q96K31 380 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 MAP3K20Q9NYL2 800 aaKnown RBP9.49□□□□□ -0.89
SF1-218ENST00000489544 PCDHA4Q9UN74 947 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 SMC3Q9UQE7 1217 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 CNPY2Q9Y2B0 182 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 RBBP6Q7Z6E9 1792 aaKnown RBP9.49□□□□□ -0.89
SF1-218ENST00000489544 SYNGAP1Q96PV0 1343 aa9.49□□□□□ -0.89
SF1-218ENST00000489544 MCM3APO60318 1980 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 POTEFA5A3E0 1075 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 BTBD18B2RXH4 712 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 M0R2N6 131 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 EDIL3O43854 480 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 SORBS3O60504 671 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 RGS20O76081 388 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 MMP1P03956 469 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 MLLT1Q03111 559 aaPredicted RBP9.48□□□□□ -0.89
SF1-218ENST00000489544 TAPT1Q6NXT6 567 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 VSIG10LQ86VR7 867 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 MSL3Q8N5Y2 521 aaKnown RBP9.48□□□□□ -0.89
SF1-218ENST00000489544 SAMD3Q8N6K7 520 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 CYP2W1Q8TAV3 490 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms