RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 PCDHA8Q9Y5H6 950 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 DNAJC25-GNG10A0A024R161 153 aa16.28■□□□□ 0.2
CLDN11-209ENST00000489485 KIF28PB7ZC32 967 aa16.28■□□□□ 0.2
CLDN11-209ENST00000489485 FOSP01100 380 aaPredicted RBP16.28■□□□□ 0.2
CLDN11-209ENST00000489485 HSPA8P11142 646 aaKnown RBP16.28■□□□□ 0.2
CLDN11-209ENST00000489485 CYP2B6P20813 491 aa16.28■□□□□ 0.2
CLDN11-209ENST00000489485 HOXD10P28358 340 aa16.28■□□□□ 0.2
CLDN11-209ENST00000489485 LBX1P52954 281 aa16.28■□□□□ 0.2
CLDN11-209ENST00000489485 PRKCZQ05513 592 aa16.28■□□□□ 0.2
CLDN11-209ENST00000489485 AP3B2Q13367 1082 aa16.28■□□□□ 0.2
CLDN11-209ENST00000489485 TEX2Q8IWB9 1127 aa16.28■□□□□ 0.2
CLDN11-209ENST00000489485 FAM133AQ8N9E0 248 aa16.28■□□□□ 0.2
CLDN11-209ENST00000489485 ADD3Q9UEY8 706 aaKnown RBP16.28■□□□□ 0.2
CLDN11-209ENST00000489485 GJD2Q9UKL4 321 aa16.28■□□□□ 0.2
CLDN11-209ENST00000489485 GABRQQ9UN88 632 aa16.28■□□□□ 0.2
CLDN11-209ENST00000489485 CCDC194A0A1B0GVG4 234 aa16.27■□□□□ 0.2
CLDN11-209ENST00000489485 M0R2N6 131 aa16.27■□□□□ 0.2
CLDN11-209ENST00000489485 EIF2AK2P19525 551 aaKnown RBP16.27■□□□□ 0.2
CLDN11-209ENST00000489485 RGS2P41220 211 aa16.27■□□□□ 0.2
CLDN11-209ENST00000489485 CTCFP49711 727 aaPredicted RBP16.27■□□□□ 0.2
CLDN11-209ENST00000489485 FLT3LGP49771 235 aa16.27■□□□□ 0.2
CLDN11-209ENST00000489485 UBXN2AP68543 259 aa16.27■□□□□ 0.2
CLDN11-209ENST00000489485 ARHGEF16Q5VV41 709 aa16.27■□□□□ 0.2
CLDN11-209ENST00000489485 ANO3Q9BYT9 981 aa16.27■□□□□ 0.2
CLDN11-209ENST00000489485 FOXP1Q9H334 677 aaPredicted RBP16.27■□□□□ 0.2
CLDN11-209ENST00000489485 ZNF236Q9UL36 1845 aa16.27■□□□□ 0.2
CLDN11-209ENST00000489485 GNRH1P01148 92 aa16.27■□□□□ 0.19
CLDN11-209ENST00000489485 MCTP2Q6DN12 878 aa16.27■□□□□ 0.19
CLDN11-209ENST00000489485 FAM173BQ6P4H8 233 aa16.27■□□□□ 0.19
CLDN11-209ENST00000489485 PIK3AP1Q6ZUJ8 805 aa16.27■□□□□ 0.19
CLDN11-209ENST00000489485 DNERQ8NFT8 737 aa16.27■□□□□ 0.19
CLDN11-209ENST00000489485 NSUN6Q8TEA1 469 aaKnown RBP16.27■□□□□ 0.19
CLDN11-209ENST00000489485 TRIM17Q9Y577 477 aa16.27■□□□□ 0.19
CLDN11-209ENST00000489485 CENPFP49454 3210 aa16.26■□□□□ 0.19
CLDN11-209ENST00000489485 SOWAHBA6NEL2 793 aa16.26■□□□□ 0.19
CLDN11-209ENST00000489485 ZNF792Q3KQV3 632 aa16.26■□□□□ 0.19
CLDN11-209ENST00000489485 KRT25Q7Z3Z0 450 aa16.26■□□□□ 0.19
CLDN11-209ENST00000489485 NPLOC4Q8TAT6 608 aa16.26■□□□□ 0.19
CLDN11-209ENST00000489485 USP6NLQ92738 828 aa16.26■□□□□ 0.19
CLDN11-209ENST00000489485 TNPO1Q92973 898 aaKnown RBP16.26■□□□□ 0.19
CLDN11-209ENST00000489485 EHMT1Q9H9B1 1298 aa16.26■□□□□ 0.19
CLDN11-209ENST00000489485 PXMP2Q9NR77 195 aa16.26■□□□□ 0.19
CLDN11-209ENST00000489485 SRRDQ9UH36 339 aa16.26■□□□□ 0.19
CLDN11-209ENST00000489485 MCM3APO60318 1980 aa16.26■□□□□ 0.19
CLDN11-209ENST00000489485 MYH7BA7E2Y1 1941 aa16.25■□□□□ 0.19
CLDN11-209ENST00000489485 ASTN1O14525 1302 aa16.25■□□□□ 0.19
CLDN11-209ENST00000489485 U2AF2P26368 475 aaKnown RBP eCLIP16.25■□□□□ 0.19
CLDN11-209ENST00000489485 ALDH5A1P51649 535 aaPredicted RBP16.25■□□□□ 0.19
CLDN11-209ENST00000489485 RESTQ13127 1097 aa16.25■□□□□ 0.19
CLDN11-209ENST00000489485 NONOQ15233 471 aaKnown RBP eCLIP16.25■□□□□ 0.19
CLDN11-209ENST00000489485 NOSTRINQ8IVI9 506 aa16.25■□□□□ 0.19
CLDN11-209ENST00000489485 MAML3Q96JK9 1138 aa16.25■□□□□ 0.19
CLDN11-209ENST00000489485 APBA2Q99767 749 aa16.25■□□□□ 0.19
CLDN11-209ENST00000489485 ZSCAN16Q9H4T2 348 aaPredicted RBP16.25■□□□□ 0.19
CLDN11-209ENST00000489485 DDX49Q9Y6V7 483 aaKnown RBP16.25■□□□□ 0.19
CLDN11-209ENST00000489485 EARS2Q5JPH6 523 aaKnown RBP16.25■□□□□ 0.19
CLDN11-209ENST00000489485 OTOP1Q7RTM1 612 aa16.25■□□□□ 0.19
CLDN11-209ENST00000489485 TBCKQ8TEA7 893 aa16.25■□□□□ 0.19
CLDN11-209ENST00000489485 TNFRSF25Q93038 417 aa16.25■□□□□ 0.19
CLDN11-209ENST00000489485 CHAMP1Q96JM3 812 aa16.25■□□□□ 0.19
CLDN11-209ENST00000489485 MPHOSPH6Q99547 160 aaKnown RBP16.25■□□□□ 0.19
CLDN11-209ENST00000489485 DIS3Q9Y2L1 958 aaKnown RBP16.25■□□□□ 0.19
CLDN11-209ENST00000489485 FAM205CA6NFA0 338 aa16.24■□□□□ 0.19
CLDN11-209ENST00000489485 HOXC6P09630 235 aa16.24■□□□□ 0.19
CLDN11-209ENST00000489485 MYCLP12524 364 aaPredicted RBP16.24■□□□□ 0.19
CLDN11-209ENST00000489485 PGM5Q15124 567 aa16.24■□□□□ 0.19
CLDN11-209ENST00000489485 INF2Q27J81 1249 aa16.24■□□□□ 0.19
CLDN11-209ENST00000489485 RAET1EQ8TD07 263 aa16.24■□□□□ 0.19
CLDN11-209ENST00000489485 FGD4Q96M96 766 aa16.24■□□□□ 0.19
CLDN11-209ENST00000489485 PDCD2LQ9BRP1 358 aa16.24■□□□□ 0.19
CLDN11-209ENST00000489485 TCHHQ07283 1943 aa16.24■□□□□ 0.19
CLDN11-209ENST00000489485 B4DLN1 442 aa16.23■□□□□ 0.19
CLDN11-209ENST00000489485 NR3C2P08235 984 aa16.23■□□□□ 0.19
CLDN11-209ENST00000489485 CCL14Q16627 93 aa16.23■□□□□ 0.19
CLDN11-209ENST00000489485 ZFP91Q96JP5 570 aaPredicted RBP16.23■□□□□ 0.19
CLDN11-209ENST00000489485 RPTORQ8N122 1335 aa16.23■□□□□ 0.19
CLDN11-209ENST00000489485 ASB14A6NK59 587 aa16.22■□□□□ 0.19
CLDN11-209ENST00000489485 XRCC5P13010 732 aaKnown RBP16.22■□□□□ 0.19
CLDN11-209ENST00000489485 SREBF1P36956 1147 aa16.22■□□□□ 0.19
CLDN11-209ENST00000489485 ARHGAP4P98171 946 aa16.22■□□□□ 0.19
CLDN11-209ENST00000489485 PDE4DQ08499 809 aa16.22■□□□□ 0.19
CLDN11-209ENST00000489485 BRAPQ7Z569 592 aa16.22■□□□□ 0.19
CLDN11-209ENST00000489485 ZNF467Q7Z7K2 595 aaPredicted RBP16.22■□□□□ 0.19
CLDN11-209ENST00000489485 IL31RAQ8NI17 732 aa16.22■□□□□ 0.19
CLDN11-209ENST00000489485 IWS1Q96ST2 819 aa16.22■□□□□ 0.19
CLDN11-209ENST00000489485 TINF2Q9BSI4 451 aa16.22■□□□□ 0.19
CLDN11-209ENST00000489485 ATP6V1DQ9Y5K8 247 aa16.22■□□□□ 0.19
CLDN11-209ENST00000489485 ATP2B1P20020 1258 aa16.22■□□□□ 0.19
CLDN11-209ENST00000489485 PRMT2P55345 433 aa16.22■□□□□ 0.19
CLDN11-209ENST00000489485 STXBP2Q15833 593 aa16.22■□□□□ 0.19
CLDN11-209ENST00000489485 ARMCX2Q7L311 632 aa16.22■□□□□ 0.19
CLDN11-209ENST00000489485 FLRT1Q9NZU1 646 aa16.22■□□□□ 0.19
CLDN11-209ENST00000489485 FRMPD4Q14CM0 1322 aa16.21■□□□□ 0.19
CLDN11-209ENST00000489485 CCND2P30279 289 aa16.21■□□□□ 0.19
CLDN11-209ENST00000489485 ZNF76P36508 570 aa16.21■□□□□ 0.19
CLDN11-209ENST00000489485 DNM1Q05193 864 aaKnown RBP16.21■□□□□ 0.19
CLDN11-209ENST00000489485 IRF5Q13568 498 aa16.21■□□□□ 0.19
CLDN11-209ENST00000489485 LETM2Q2VYF4 491 aa16.21■□□□□ 0.19
CLDN11-209ENST00000489485 MYSM1Q5VVJ2 828 aa16.21■□□□□ 0.19
CLDN11-209ENST00000489485 PCNX4Q63HM2 1172 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms