RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 FGRP09769 529 aa12.19□□□□□ -0.46
CHKB-211ENST00000489453 TXNP10599 105 aaKnown RBP12.19□□□□□ -0.46
CHKB-211ENST00000489453 PCP11498 1178 aaKnown RBP12.19□□□□□ -0.46
CHKB-211ENST00000489453 MFAP1P55081 439 aaKnown RBP12.19□□□□□ -0.46
CHKB-211ENST00000489453 RPS6P62753 249 aaKnown RBP12.19□□□□□ -0.46
CHKB-211ENST00000489453 ZNF543Q08ER8 600 aa12.19□□□□□ -0.46
CHKB-211ENST00000489453 BFSP2Q13515 415 aa12.19□□□□□ -0.46
CHKB-211ENST00000489453 AAK1Q2M2I8 961 aa12.19□□□□□ -0.46
CHKB-211ENST00000489453 NBPF20Q3BBV1 942 aa12.19□□□□□ -0.46
CHKB-211ENST00000489453 NFRKBQ6P4R8 1299 aa12.19□□□□□ -0.46
CHKB-211ENST00000489453 MFSD6Q6ZSS7 791 aa12.19□□□□□ -0.46
CHKB-211ENST00000489453 DNERQ8NFT8 737 aa12.19□□□□□ -0.46
CHKB-211ENST00000489453 CLEC4DQ8WXI8 215 aa12.19□□□□□ -0.46
CHKB-211ENST00000489453 FAM227BQ96M60 508 aa12.19□□□□□ -0.46
CHKB-211ENST00000489453 SLC9A7Q96T83 725 aa12.19□□□□□ -0.46
CHKB-211ENST00000489453 PTPRSQ13332 1948 aa12.19□□□□□ -0.46
CHKB-211ENST00000489453 COL4A4P53420 1690 aaPredicted RBP12.19□□□□□ -0.46
CHKB-211ENST00000489453 CHD7Q9P2D1 2997 aa12.18□□□□□ -0.46
CHKB-211ENST00000489453 CCDC171Q6TFL3 1326 aa12.18□□□□□ -0.46
CHKB-211ENST00000489453 SALL3Q9BXA9 1300 aa12.18□□□□□ -0.46
CHKB-211ENST00000489453 KIF28PB7ZC32 967 aa12.18□□□□□ -0.46
CHKB-211ENST00000489453 HSPD1P10809 573 aaKnown RBP12.18□□□□□ -0.46
CHKB-211ENST00000489453 COL9A1P20849 921 aa12.18□□□□□ -0.46
CHKB-211ENST00000489453 KCNJ6P48051 423 aa12.18□□□□□ -0.46
CHKB-211ENST00000489453 PDE1AP54750 535 aa12.18□□□□□ -0.46
CHKB-211ENST00000489453 PTPN11Q06124 597 aaPredicted RBP12.18□□□□□ -0.46
CHKB-211ENST00000489453 NMIQ13287 307 aaPredicted RBP12.18□□□□□ -0.46
CHKB-211ENST00000489453 GPATCH4Q5T3I0 446 aaKnown RBP12.18□□□□□ -0.46
CHKB-211ENST00000489453 ESR2Q92731 530 aa12.18□□□□□ -0.46
CHKB-211ENST00000489453 RILPL2Q969X0 211 aa12.18□□□□□ -0.46
CHKB-211ENST00000489453 TTC14Q96N46 770 aa12.18□□□□□ -0.46
CHKB-211ENST00000489453 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
CHKB-211ENST00000489453 DHX16O60231 1041 aaKnown RBP12.17□□□□□ -0.46
CHKB-211ENST00000489453 CA3P07451 260 aa12.17□□□□□ -0.46
CHKB-211ENST00000489453 TICAM2Q86XR7 235 aa12.17□□□□□ -0.46
CHKB-211ENST00000489453 PPP1R13LQ8WUF5 828 aa12.17□□□□□ -0.46
CHKB-211ENST00000489453 COPS5Q92905 334 aa12.17□□□□□ -0.46
CHKB-211ENST00000489453 CERS4Q9HA82 394 aa12.17□□□□□ -0.46
CHKB-211ENST00000489453 ABCB11O95342 1321 aa12.16□□□□□ -0.46
CHKB-211ENST00000489453 A6NJR5 290 aa12.16□□□□□ -0.46
CHKB-211ENST00000489453 IQCF3P0C7M6 154 aa12.16□□□□□ -0.46
CHKB-211ENST00000489453 GOLGA8HP0CJ92 632 aa12.16□□□□□ -0.46
CHKB-211ENST00000489453 EDNRBP24530 442 aa12.16□□□□□ -0.46
CHKB-211ENST00000489453 RRP1P56182 461 aaKnown RBP12.16□□□□□ -0.46
CHKB-211ENST00000489453 CDC37Q16543 378 aaPredicted RBP12.16□□□□□ -0.46
CHKB-211ENST00000489453 PTGISQ16647 500 aa12.16□□□□□ -0.46
CHKB-211ENST00000489453 CCDC178Q5BJE1 867 aa12.16□□□□□ -0.46
CHKB-211ENST00000489453 SEPT14Q6ZU15 432 aa12.16□□□□□ -0.46
CHKB-211ENST00000489453 ZNF589Q86UQ0 364 aaPredicted RBP12.16□□□□□ -0.46
CHKB-211ENST00000489453 IQCA1Q86XH1 822 aa12.16□□□□□ -0.46
CHKB-211ENST00000489453 PHOSPHO2Q8TCD6 241 aa12.16□□□□□ -0.46
CHKB-211ENST00000489453 ARNTL2Q8WYA1 636 aa12.16□□□□□ -0.46
CHKB-211ENST00000489453 ZKSCAN3Q9BRR0 538 aa12.16□□□□□ -0.46
CHKB-211ENST00000489453 KAT14Q9H8E8 782 aa12.16□□□□□ -0.46
CHKB-211ENST00000489453 MUC3AQ02505 3323 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 ZNF213O14771 459 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 TLL1O43897 1013 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 BAIAP3O94812 1187 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 GH1P01241 217 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 SNHG28P0DPA3 235 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 CHST3Q7LGC8 479 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 MCF2L2Q86YR7 1114 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 TBC1D10CQ8IV04 446 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 HERC6Q8IVU3 1022 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 RGS22Q8NE09 1264 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 CAGE1Q8TC20 777 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 NSUN6Q8TEA1 469 aaKnown RBP12.15□□□□□ -0.46
CHKB-211ENST00000489453 AFAP1L1Q8TED9 768 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 CRBNQ96SW2 442 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 UBA5Q9GZZ9 404 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 SIP14410 1827 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 TRANK1O15050 2925 aa12.15□□□□□ -0.46
CHKB-211ENST00000489453 REV3LO60673 3130 aa12.15□□□□□ -0.47
CHKB-211ENST00000489453 NEDD4P46934 1319 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 RFXAPO00287 272 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 MMP3P08254 477 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 CASTP20810 708 aaKnown RBP12.14□□□□□ -0.47
CHKB-211ENST00000489453 NT5C2P49902 561 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 HDAC1Q13547 482 aaPredicted RBP12.14□□□□□ -0.47
CHKB-211ENST00000489453 STXBP2Q15833 593 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 ARHGEF16Q5VV41 709 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 DGKHQ86XP1 1220 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 C7orf31Q8N865 590 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 PNMA1Q8ND90 353 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 AFG1LQ8WV93 481 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 VWCEQ96DN2 955 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 RMDN3Q96TC7 470 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 ZBED2Q9BTP6 218 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 LNPKQ9C0E8 428 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 CPVLQ9H3G5 476 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 DIAPH3Q9NSV4 1193 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 MRPL11Q9Y3B7 192 aaKnown RBP12.14□□□□□ -0.47
CHKB-211ENST00000489453 KAT6AQ92794 2004 aa12.14□□□□□ -0.47
CHKB-211ENST00000489453 MICAL3Q7RTP6 2002 aa12.13□□□□□ -0.47
CHKB-211ENST00000489453 KDM4AO75164 1064 aa12.13□□□□□ -0.47
CHKB-211ENST00000489453 ARIH2O95376 493 aa12.13□□□□□ -0.47
CHKB-211ENST00000489453 PARNO95453 639 aaKnown RBP12.13□□□□□ -0.47
CHKB-211ENST00000489453 SELPP16109 830 aa12.13□□□□□ -0.47
CHKB-211ENST00000489453 TFF2Q03403 129 aa12.13□□□□□ -0.47
CHKB-211ENST00000489453 TAP1Q03518 808 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms