RNA–Protein interactions for RNA: ENST00000489324.1

FDPS-214, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-214ENST00000489324 MSCO60682 206 aa11.19□□□□□ -0.62
FDPS-214ENST00000489324 CLK2P49760 499 aaKnown RBP11.19□□□□□ -0.62
FDPS-214ENST00000489324 BECN1Q14457 450 aa11.19□□□□□ -0.62
FDPS-214ENST00000489324 STXBP2Q15833 593 aa11.19□□□□□ -0.62
FDPS-214ENST00000489324 USP17L6PQ6QN14 398 aa11.19□□□□□ -0.62
FDPS-214ENST00000489324 ARMCX2Q7L311 632 aa11.19□□□□□ -0.62
FDPS-214ENST00000489324 REXO1Q8N1G1 1221 aaKnown RBP11.19□□□□□ -0.62
FDPS-214ENST00000489324 FGD4Q96M96 766 aa11.19□□□□□ -0.62
FDPS-214ENST00000489324 TAAR1Q96RJ0 339 aa11.19□□□□□ -0.62
FDPS-214ENST00000489324 PHF20Q9BVI0 1012 aa11.19□□□□□ -0.62
FDPS-214ENST00000489324 VTA1Q9NP79 307 aa11.19□□□□□ -0.62
FDPS-214ENST00000489324 PXMP2Q9NR77 195 aa11.19□□□□□ -0.62
FDPS-214ENST00000489324 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.19□□□□□ -0.62
FDPS-214ENST00000489324 BIN2Q9UBW5 565 aaPredicted RBP11.19□□□□□ -0.62
FDPS-214ENST00000489324 SMC3Q9UQE7 1217 aa11.19□□□□□ -0.62
FDPS-214ENST00000489324 EIF3JO75822 258 aaKnown RBP11.18□□□□□ -0.62
FDPS-214ENST00000489324 INHAP05111 366 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 NR3C2P08235 984 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 ELNP15502 786 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 HOXA13P31271 388 aaPredicted RBP11.18□□□□□ -0.62
FDPS-214ENST00000489324 PDE4DQ08499 809 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 SAFBQ15424 915 aaKnown RBP eCLIP11.18□□□□□ -0.62
FDPS-214ENST00000489324 CCL14Q16627 93 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 KCNV1Q6PIU1 500 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 VSIG10LQ86VR7 867 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 FCHSD1Q86WN1 690 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 BLIDQ8IZY5 108 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 ZNF333Q96JL9 665 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 C8orf76Q96K31 380 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 PDCD2LQ9BRP1 358 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 HMX1Q9NP08 348 aaPredicted RBP11.18□□□□□ -0.62
FDPS-214ENST00000489324 FLRT1Q9NZU1 646 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 COL20A1Q9P218 1284 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 PCDHA6Q9UN73 950 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 PCDHA8Q9Y5H6 950 aa11.18□□□□□ -0.62
FDPS-214ENST00000489324 BAZ2BQ9UIF8 2168 aaKnown RBP11.18□□□□□ -0.62
FDPS-214ENST00000489324 PCNTO95613 3336 aa11.17□□□□□ -0.62
FDPS-214ENST00000489324 PPFIA3O75145 1194 aa11.17□□□□□ -0.62
FDPS-214ENST00000489324 SNAI1O95863 264 aaPredicted RBP11.17□□□□□ -0.62
FDPS-214ENST00000489324 CYBAP13498 195 aa11.17□□□□□ -0.62
FDPS-214ENST00000489324 PRKAR2AP13861 404 aaKnown RBP11.17□□□□□ -0.62
FDPS-214ENST00000489324 PDCP20941 246 aa11.17□□□□□ -0.62
FDPS-214ENST00000489324 CCND2P30279 289 aa11.17□□□□□ -0.62
FDPS-214ENST00000489324 CYP2C19P33261 490 aa11.17□□□□□ -0.62
FDPS-214ENST00000489324 CACNB2Q08289 660 aaPredicted RBP11.17□□□□□ -0.62
FDPS-214ENST00000489324 ACVR2BQ13705 512 aa11.17□□□□□ -0.62
FDPS-214ENST00000489324 PGM5Q15124 567 aa11.17□□□□□ -0.62
FDPS-214ENST00000489324 COL13A1Q5TAT6 717 aaPredicted RBP11.17□□□□□ -0.62
FDPS-214ENST00000489324 PCNX4Q63HM2 1172 aa11.17□□□□□ -0.62
FDPS-214ENST00000489324 KRT40Q6A162 431 aa11.17□□□□□ -0.62
FDPS-214ENST00000489324 KRT25Q7Z3Z0 450 aa11.17□□□□□ -0.62
FDPS-214ENST00000489324 FBXO18Q8NFZ0 1043 aa11.17□□□□□ -0.62
FDPS-214ENST00000489324 ANO3Q9BYT9 981 aa11.17□□□□□ -0.62
FDPS-214ENST00000489324 PLXNB2O15031 1838 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 ASTN1O14525 1302 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 RBM47A0AV96 593 aaKnown RBP11.16□□□□□ -0.62
FDPS-214ENST00000489324 M0R2N6 131 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 NKRFO15226 690 aaKnown RBP eCLIP11.16□□□□□ -0.62
FDPS-214ENST00000489324 MAFGO15525 162 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 SEPT4O43236 478 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 MMP1P03956 469 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 CYP3A4P08684 503 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 ZNF865P0CJ78 1059 aaPredicted RBP11.16□□□□□ -0.62
FDPS-214ENST00000489324 AKR1A1P14550 325 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 EIF2AK2P19525 551 aaKnown RBP11.16□□□□□ -0.62
FDPS-214ENST00000489324 GJB2P29033 226 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 KRT2P35908 639 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 SREBF1P36956 1147 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 UBE2SQ16763 222 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 GNPTABQ3T906 1256 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 IQSEC1Q6DN90 963 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 SH3TC2Q8TF17 1288 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 CDHR1Q96JP9 859 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 AIFM3Q96NN9 605 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 NAP1L4Q99733 375 aaKnown RBP11.16□□□□□ -0.62
FDPS-214ENST00000489324 FAM184BQ9ULE4 1060 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 Q9Y3F1 56 aa11.16□□□□□ -0.62
FDPS-214ENST00000489324 HSP90AA1P07900 732 aaKnown RBP11.15□□□□□ -0.62
FDPS-214ENST00000489324 TGFB3P10600 412 aa11.15□□□□□ -0.62
FDPS-214ENST00000489324 ICAM3P32942 547 aa11.15□□□□□ -0.62
FDPS-214ENST00000489324 USP11P51784 963 aa11.15□□□□□ -0.62
FDPS-214ENST00000489324 TTLL4Q14679 1199 aa11.15□□□□□ -0.62
FDPS-214ENST00000489324 NPY5RQ15761 445 aa11.15□□□□□ -0.62
FDPS-214ENST00000489324 JAKMIP3Q5VZ66 844 aa11.15□□□□□ -0.62
FDPS-214ENST00000489324 NIPA1Q7RTP0 329 aa11.15□□□□□ -0.62
FDPS-214ENST00000489324 NLRX1Q86UT6 975 aa11.15□□□□□ -0.62
FDPS-214ENST00000489324 TNS4Q8IZW8 715 aa11.15□□□□□ -0.62
FDPS-214ENST00000489324 SCFD2Q8WU76 684 aa11.15□□□□□ -0.62
FDPS-214ENST00000489324 SHISA4Q96DD7 197 aa11.15□□□□□ -0.62
FDPS-214ENST00000489324 PURBQ96QR8 312 aaKnown RBP11.15□□□□□ -0.62
FDPS-214ENST00000489324 TMEM106CQ9BVX2 250 aa11.15□□□□□ -0.62
FDPS-214ENST00000489324 KATNBL1Q9H079 304 aa11.15□□□□□ -0.62
FDPS-214ENST00000489324 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.15□□□□□ -0.62
FDPS-214ENST00000489324 FOXP1Q9H334 677 aaPredicted RBP11.15□□□□□ -0.62
FDPS-214ENST00000489324 PAK6Q9NQU5 681 aaPredicted RBP11.15□□□□□ -0.62
FDPS-214ENST00000489324 ZHX1Q9UKY1 873 aaPredicted RBP11.15□□□□□ -0.62
FDPS-214ENST00000489324 KCNJ14Q9UNX9 436 aa11.15□□□□□ -0.62
FDPS-214ENST00000489324 DOCK3Q8IZD9 2030 aa11.14□□□□□ -0.63
FDPS-214ENST00000489324 ZSWIM8A7E2V4 1837 aa11.14□□□□□ -0.63
FDPS-214ENST00000489324 MYH6P13533 1939 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms