RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 GCOM1H8Y6P7 765 aaPredicted RBP27.76■■■□□ 2.03
PTPN18-213ENST00000489215 POLR2MP0CAP2 368 aa27.76■■■□□ 2.03
PTPN18-213ENST00000489215 SYN1P17600 705 aa27.76■■■□□ 2.03
PTPN18-213ENST00000489215 TTLL4Q14679 1199 aa27.76■■■□□ 2.03
PTPN18-213ENST00000489215 PPP2R5BQ15173 497 aa27.76■■■□□ 2.03
PTPN18-213ENST00000489215 FSCN1Q16658 493 aaKnown RBP27.76■■■□□ 2.03
PTPN18-213ENST00000489215 SLC35G1Q2M3R5 365 aa27.76■■■□□ 2.03
PTPN18-213ENST00000489215 ADCK5Q3MIX3 580 aa27.76■■■□□ 2.03
PTPN18-213ENST00000489215 VTI1AQ96AJ9 217 aa27.76■■■□□ 2.03
PTPN18-213ENST00000489215 TOX2Q96NM4 488 aa27.76■■■□□ 2.03
PTPN18-213ENST00000489215 GDF15Q99988 308 aa27.76■■■□□ 2.03
PTPN18-213ENST00000489215 LBHD1Q9BQE6 289 aaPredicted RBP27.76■■■□□ 2.03
PTPN18-213ENST00000489215 PRO3102Q9H379 93 aa27.76■■■□□ 2.03
PTPN18-213ENST00000489215 EIF5BO60841 1220 aaKnown RBP27.75■■■□□ 2.03
PTPN18-213ENST00000489215 RCAN1P53805 252 aa27.75■■■□□ 2.03
PTPN18-213ENST00000489215 TRIM60Q495X7 471 aa27.75■■■□□ 2.03
PTPN18-213ENST00000489215 BLOC1S2Q6QNY1 142 aa27.75■■■□□ 2.03
PTPN18-213ENST00000489215 RBM27Q9P2N5 1060 aaKnown RBP27.75■■■□□ 2.03
PTPN18-213ENST00000489215 MYADML2A6NDP7 307 aa27.74■■■□□ 2.03
PTPN18-213ENST00000489215 OPLAHO14841 1288 aa27.74■■■□□ 2.03
PTPN18-213ENST00000489215 EIF3JO75822 258 aaKnown RBP27.74■■■□□ 2.03
PTPN18-213ENST00000489215 CPT1AP50416 773 aa27.74■■■□□ 2.03
PTPN18-213ENST00000489215 APOA5Q6Q788 366 aa27.74■■■□□ 2.03
PTPN18-213ENST00000489215 MICU3Q86XE3 530 aa27.74■■■□□ 2.03
PTPN18-213ENST00000489215 PXMP2Q9NR77 195 aa27.74■■■□□ 2.03
PTPN18-213ENST00000489215 COL20A1Q9P218 1284 aa27.74■■■□□ 2.03
PTPN18-213ENST00000489215 DDX49Q9Y6V7 483 aaKnown RBP27.74■■■□□ 2.03
PTPN18-213ENST00000489215 A0A0U1RQG5 324 aaPredicted RBP27.73■■■□□ 2.03
PTPN18-213ENST00000489215 DCDC2CA8MYV0 355 aa27.73■■■□□ 2.03
PTPN18-213ENST00000489215 CTAGE5O15320 804 aa27.73■■■□□ 2.03
PTPN18-213ENST00000489215 ZBTB43O43298 467 aa27.73■■■□□ 2.03
PTPN18-213ENST00000489215 ANKRD33Q7Z3H0 272 aa27.73■■■□□ 2.03
PTPN18-213ENST00000489215 SRBD1Q8N5C6 995 aaKnown RBP27.73■■■□□ 2.03
PTPN18-213ENST00000489215 SNX14Q9Y5W7 946 aa27.73■■■□□ 2.03
PTPN18-213ENST00000489215 NR3C2P08235 984 aa27.72■■■□□ 2.03
PTPN18-213ENST00000489215 TXNP10599 105 aaKnown RBP27.72■■■□□ 2.03
PTPN18-213ENST00000489215 TLE2Q04725 743 aa27.72■■■□□ 2.03
PTPN18-213ENST00000489215 COL9A3Q14050 684 aaPredicted RBP27.72■■■□□ 2.03
PTPN18-213ENST00000489215 TMTC3Q6ZXV5 915 aa27.72■■■□□ 2.03
PTPN18-213ENST00000489215 FBXL16Q8N461 479 aa27.72■■■□□ 2.03
PTPN18-213ENST00000489215 CUL5Q93034 780 aa27.72■■■□□ 2.03
PTPN18-213ENST00000489215 JAKMIP1Q96N16 626 aaKnown RBP27.72■■■□□ 2.03
PTPN18-213ENST00000489215 POLR3EQ9NVU0 708 aa27.72■■■□□ 2.03
PTPN18-213ENST00000489215 CCDC196A0A1B0GTZ2 297 aa27.71■■■□□ 2.03
PTPN18-213ENST00000489215 KPNA6O60684 536 aa27.71■■■□□ 2.03
PTPN18-213ENST00000489215 PLEKHA8P1O95397 391 aa27.71■■■□□ 2.03
PTPN18-213ENST00000489215 EIF2AK2P19525 551 aaKnown RBP27.71■■■□□ 2.03
PTPN18-213ENST00000489215 RXRAP19793 462 aa27.71■■■□□ 2.03
PTPN18-213ENST00000489215 MAGEA10P43363 369 aaPredicted RBP27.71■■■□□ 2.03
PTPN18-213ENST00000489215 BEX3Q00994 111 aa27.71■■■□□ 2.03
PTPN18-213ENST00000489215 KCNV1Q6PIU1 500 aa27.71■■■□□ 2.03
PTPN18-213ENST00000489215 PIBF1Q8WXW3 757 aa27.71■■■□□ 2.03
PTPN18-213ENST00000489215 ARVCFO00192 962 aa27.7■■■□□ 2.02
PTPN18-213ENST00000489215 CLTBP09497 229 aa27.7■■■□□ 2.02
PTPN18-213ENST00000489215 RTN1Q16799 776 aa27.7■■■□□ 2.02
PTPN18-213ENST00000489215 OR6J1Q8NGC5 347 aa27.7■■■□□ 2.02
PTPN18-213ENST00000489215 PDCD2LQ9BRP1 358 aa27.7■■■□□ 2.02
PTPN18-213ENST00000489215 KIAA1217Q5T5P2 1943 aa27.69■■■□□ 2.02
PTPN18-213ENST00000489215 CDK7P50613 346 aa27.69■■■□□ 2.02
PTPN18-213ENST00000489215 TEX2Q8IWB9 1127 aa27.69■■■□□ 2.02
PTPN18-213ENST00000489215 TCEANC2Q96MN5 208 aa27.69■■■□□ 2.02
PTPN18-213ENST00000489215 UBE2OQ9C0C9 1292 aaKnown RBP27.69■■■□□ 2.02
PTPN18-213ENST00000489215 PRDM5Q9NQX1 630 aaPredicted RBP27.69■■■□□ 2.02
PTPN18-213ENST00000489215 KLF18A0A0U1RQI7 1052 aa27.68■■■□□ 2.02
PTPN18-213ENST00000489215 PIK3CDO00329 1044 aa27.68■■■□□ 2.02
PTPN18-213ENST00000489215 TLR3O15455 904 aaKnown RBP27.68■■■□□ 2.02
PTPN18-213ENST00000489215 PQBP1O60828 265 aaKnown RBP27.68■■■□□ 2.02
PTPN18-213ENST00000489215 STAM2O75886 525 aa27.68■■■□□ 2.02
PTPN18-213ENST00000489215 HOXA13P31271 388 aaPredicted RBP27.68■■■□□ 2.02
PTPN18-213ENST00000489215 IRX5P78411 483 aaPredicted RBP27.68■■■□□ 2.02
PTPN18-213ENST00000489215 CXCL17Q6UXB2 119 aa27.68■■■□□ 2.02
PTPN18-213ENST00000489215 SEPT14Q6ZU15 432 aa27.68■■■□□ 2.02
PTPN18-213ENST00000489215 VSIG10LQ86VR7 867 aa27.68■■■□□ 2.02
PTPN18-213ENST00000489215 SMARCC2Q8TAQ2 1214 aa27.68■■■□□ 2.02
PTPN18-213ENST00000489215 USP26Q9BXU7 913 aa27.68■■■□□ 2.02
PTPN18-213ENST00000489215 PDLIM7Q9NR12 457 aa27.68■■■□□ 2.02
PTPN18-213ENST00000489215 CCND2P30279 289 aa27.67■■■□□ 2.02
PTPN18-213ENST00000489215 PGM5Q15124 567 aa27.67■■■□□ 2.02
PTPN18-213ENST00000489215 CCDC62Q6P9F0 684 aa27.67■■■□□ 2.02
PTPN18-213ENST00000489215 Q6ZUG5 572 aa27.67■■■□□ 2.02
PTPN18-213ENST00000489215 FCHSD1Q86WN1 690 aa27.67■■■□□ 2.02
PTPN18-213ENST00000489215 BRPF3Q9ULD4 1205 aa27.67■■■□□ 2.02
PTPN18-213ENST00000489215 A6NJR5 290 aa27.66■■■□□ 2.02
PTPN18-213ENST00000489215 GOLGA8AA7E2F4 631 aa27.66■■■□□ 2.02
PTPN18-213ENST00000489215 GOLGA8BA8MQT2 603 aa27.66■■■□□ 2.02
PTPN18-213ENST00000489215 GH1P01241 217 aa27.66■■■□□ 2.02
PTPN18-213ENST00000489215 TGFB3P10600 412 aa27.66■■■□□ 2.02
PTPN18-213ENST00000489215 RPS6KB1P23443 525 aa27.66■■■□□ 2.02
PTPN18-213ENST00000489215 RAB11FIP4Q86YS3 637 aa27.66■■■□□ 2.02
PTPN18-213ENST00000489215 CMTR1Q8N1G2 835 aaKnown RBP27.66■■■□□ 2.02
PTPN18-213ENST00000489215 CCDC82Q8N4S0 544 aa27.66■■■□□ 2.02
PTPN18-213ENST00000489215 PSTPIP2Q9H939 334 aa27.66■■■□□ 2.02
PTPN18-213ENST00000489215 TMEM39AQ9NV64 488 aa27.66■■■□□ 2.02
PTPN18-213ENST00000489215 DNAH12Q6ZR08 3092 aa27.65■■■□□ 2.02
PTPN18-213ENST00000489215 hCG_1984214I3L0E3 225 aa27.65■■■□□ 2.02
PTPN18-213ENST00000489215 KIAA0355O15063 1070 aa27.65■■■□□ 2.02
PTPN18-213ENST00000489215 MYCLP12524 364 aaPredicted RBP27.65■■■□□ 2.02
PTPN18-213ENST00000489215 CASTP20810 708 aaKnown RBP27.65■■■□□ 2.02
PTPN18-213ENST00000489215 MDM2Q00987 491 aaPredicted RBP27.65■■■□□ 2.02
PTPN18-213ENST00000489215 ITGA7Q13683 1181 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms