RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 TNFRSF8P28908 595 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 MAP2K1Q02750 393 aaPredicted RBP21.66■■□□□ 1.06
HMG20B-213ENST00000488973 CCDC178Q5BJE1 867 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 ALS2CLQ60I27 953 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 ANKRD18AQ8IVF6 992 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 HDAC7Q8WUI4 952 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 HYOU1Q9Y4L1 999 aa21.66■■□□□ 1.06
HMG20B-213ENST00000488973 CCDC189A1A4V9 331 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 A6NNZ2 444 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 EBAG9O00559 213 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 GRM4Q14833 912 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 TUBB8Q3ZCM7 444 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 SMCR8Q8TEV9 937 aaPredicted RBP21.65■■□□□ 1.06
HMG20B-213ENST00000488973 ANKS1AQ92625 1134 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 EEF2KMTQ96G04 330 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 ALS2CR12Q96Q35 445 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 ARHGAP20Q9P2F6 1191 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 EIF3HO15372 352 aaKnown RBP eCLIP21.65■■□□□ 1.06
HMG20B-213ENST00000488973 PLEKP08567 350 aaPredicted RBP21.65■■□□□ 1.06
HMG20B-213ENST00000488973 KIF11P52732 1056 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 AMPD3Q01432 767 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 MECOMQ03112 1051 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 VPS72Q15906 364 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 EZH2Q15910 746 aaKnown RBP21.65■■□□□ 1.06
HMG20B-213ENST00000488973 CNNM4Q6P4Q7 775 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 PNMA1Q8ND90 353 aa21.65■■□□□ 1.06
HMG20B-213ENST00000488973 CYP2D6P10635 497 aa21.64■■□□□ 1.05
HMG20B-213ENST00000488973 ASIC1P78348 528 aa21.64■■□□□ 1.05
HMG20B-213ENST00000488973 C2CD5Q86YS7 1000 aa21.64■■□□□ 1.05
HMG20B-213ENST00000488973 STAG2Q8N3U4 1231 aa21.64■■□□□ 1.05
HMG20B-213ENST00000488973 CAVIN3Q969G5 261 aa21.64■■□□□ 1.05
HMG20B-213ENST00000488973 RRP36Q96EU6 259 aaKnown RBP21.64■■□□□ 1.05
HMG20B-213ENST00000488973 MLXIPQ9HAP2 919 aa21.64■■□□□ 1.05
HMG20B-213ENST00000488973 BSDC1Q9NW68 430 aaPredicted RBP21.64■■□□□ 1.05
HMG20B-213ENST00000488973 STIM2Q9P246 746 aa21.64■■□□□ 1.05
HMG20B-213ENST00000488973 WTIPA6NIX2 430 aaPredicted RBP21.64■■□□□ 1.05
HMG20B-213ENST00000488973 CCT5P48643 541 aa21.64■■□□□ 1.05
HMG20B-213ENST00000488973 BARHL2Q9NY43 387 aa21.64■■□□□ 1.05
HMG20B-213ENST00000488973 SIK3Q9Y2K2 1263 aa21.64■■□□□ 1.05
HMG20B-213ENST00000488973 PJA2O43164 708 aa21.63■■□□□ 1.05
HMG20B-213ENST00000488973 MOCS3O95396 460 aa21.63■■□□□ 1.05
HMG20B-213ENST00000488973 VWA3BQ502W6 1294 aa21.63■■□□□ 1.05
HMG20B-213ENST00000488973 CENPPQ6IPU0 288 aa21.63■■□□□ 1.05
HMG20B-213ENST00000488973 CCDC155Q8N6L0 562 aa21.63■■□□□ 1.05
HMG20B-213ENST00000488973 MAD2L2Q9UI95 211 aa21.63■■□□□ 1.05
HMG20B-213ENST00000488973 GRIN2DO15399 1336 aa21.63■■□□□ 1.05
HMG20B-213ENST00000488973 ABCB11O95342 1321 aa21.63■■□□□ 1.05
HMG20B-213ENST00000488973 SHTN1A0MZ66 631 aa21.63■■□□□ 1.05
HMG20B-213ENST00000488973 OR52Z1P0C646 297 aa21.63■■□□□ 1.05
HMG20B-213ENST00000488973 FCER1AP12319 257 aa21.63■■□□□ 1.05
HMG20B-213ENST00000488973 SKOR1P84550 965 aa21.63■■□□□ 1.05
HMG20B-213ENST00000488973 TXNRD1Q16881 649 aa21.63■■□□□ 1.05
HMG20B-213ENST00000488973 CCDC181Q5TID7 509 aa21.63■■□□□ 1.05
HMG20B-213ENST00000488973 MYH14Q7Z406 1995 aaKnown RBP21.62■■□□□ 1.05
HMG20B-213ENST00000488973 STXBP3O00186 592 aa21.62■■□□□ 1.05
HMG20B-213ENST00000488973 EIF4A3P38919 411 aaKnown RBP21.62■■□□□ 1.05
HMG20B-213ENST00000488973 PAFAH1B1P43034 410 aa21.62■■□□□ 1.05
HMG20B-213ENST00000488973 CRKLP46109 303 aaKnown RBP21.62■■□□□ 1.05
HMG20B-213ENST00000488973 NNTQ13423 1086 aa21.62■■□□□ 1.05
HMG20B-213ENST00000488973 GLE1Q53GS7 698 aaKnown RBP21.62■■□□□ 1.05
HMG20B-213ENST00000488973 HAUS3Q68CZ6 603 aa21.62■■□□□ 1.05
HMG20B-213ENST00000488973 FBXO33Q7Z6M2 555 aa21.62■■□□□ 1.05
HMG20B-213ENST00000488973 CCDC84Q86UT8 332 aaPredicted RBP21.62■■□□□ 1.05
HMG20B-213ENST00000488973 BCAS4Q8TDM0 211 aa21.62■■□□□ 1.05
HMG20B-213ENST00000488973 SEMA6BQ9H3T3 888 aa21.62■■□□□ 1.05
HMG20B-213ENST00000488973 IL17RBQ9NRM6 502 aa21.62■■□□□ 1.05
HMG20B-213ENST00000488973 GNGT1P63211 74 aa21.61■■□□□ 1.05
HMG20B-213ENST00000488973 TFAP4Q01664 338 aa21.61■■□□□ 1.05
HMG20B-213ENST00000488973 NFRKBQ6P4R8 1299 aa21.61■■□□□ 1.05
HMG20B-213ENST00000488973 KIAA0895Q8NCT3 520 aa21.61■■□□□ 1.05
HMG20B-213ENST00000488973 NDST4Q9H3R1 872 aa21.61■■□□□ 1.05
HMG20B-213ENST00000488973 MINPP1Q9UNW1 487 aa21.61■■□□□ 1.05
HMG20B-213ENST00000488973 AKR1B10O60218 316 aa21.61■■□□□ 1.05
HMG20B-213ENST00000488973 HSF2BPO75031 334 aa21.61■■□□□ 1.05
HMG20B-213ENST00000488973 RUFY1Q96T51 708 aa21.61■■□□□ 1.05
HMG20B-213ENST00000488973 FAM169AQ9Y6X4 670 aa21.61■■□□□ 1.05
HMG20B-213ENST00000488973 MAP2K2P36507 400 aa21.6■■□□□ 1.05
HMG20B-213ENST00000488973 SLC7A5Q01650 507 aa21.6■■□□□ 1.05
HMG20B-213ENST00000488973 MAN2A1Q16706 1144 aa21.6■■□□□ 1.05
HMG20B-213ENST00000488973 SKIDA1Q1XH10 827 aa21.6■■□□□ 1.05
HMG20B-213ENST00000488973 HEATR3Q7Z4Q2 680 aa21.6■■□□□ 1.05
HMG20B-213ENST00000488973 MICALL1Q8N3F8 863 aa21.6■■□□□ 1.05
HMG20B-213ENST00000488973 ACSBG1Q96GR2 724 aa21.6■■□□□ 1.05
HMG20B-213ENST00000488973 NGLY1Q96IV0 654 aa21.6■■□□□ 1.05
HMG20B-213ENST00000488973 HINFPQ9BQA5 517 aa21.6■■□□□ 1.05
HMG20B-213ENST00000488973 NKRFO15226 690 aaKnown RBP eCLIP21.6■■□□□ 1.05
HMG20B-213ENST00000488973 CLSTN1O94985 981 aa21.6■■□□□ 1.05
HMG20B-213ENST00000488973 SF3B3Q15393 1217 aaKnown RBP21.6■■□□□ 1.05
HMG20B-213ENST00000488973 MMS22LQ6ZRQ5 1243 aa21.6■■□□□ 1.05
HMG20B-213ENST00000488973 RNF217Q8TC41 542 aa21.6■■□□□ 1.05
HMG20B-213ENST00000488973 RNF14Q9UBS8 474 aa21.6■■□□□ 1.05
HMG20B-213ENST00000488973 TSKSQ9UJT2 592 aa21.6■■□□□ 1.05
HMG20B-213ENST00000488973 LOC102724428A0A0B4J2F2 783 aa21.59■■□□□ 1.05
HMG20B-213ENST00000488973 PPP1R12AO14974 1030 aaPredicted RBP21.59■■□□□ 1.05
HMG20B-213ENST00000488973 CYTH3O43739 400 aa21.59■■□□□ 1.05
HMG20B-213ENST00000488973 FGFR1OPO95684 399 aaKnown RBP21.59■■□□□ 1.05
HMG20B-213ENST00000488973 MATR3P43243 847 aaKnown RBP eCLIP21.59■■□□□ 1.05
HMG20B-213ENST00000488973 MAGEA1P43355 309 aa21.59■■□□□ 1.05
HMG20B-213ENST00000488973 SIK1P57059 783 aa21.59■■□□□ 1.05
HMG20B-213ENST00000488973 SLC35G1Q2M3R5 365 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms