RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 SPRED2Q7Z698 418 aa12.69□□□□□ -0.38
YIPF3-207ENST00000488966 RETREG2Q8NC44 543 aa12.69□□□□□ -0.38
YIPF3-207ENST00000488966 FTOQ9C0B1 505 aaKnown RBP eCLIP12.69□□□□□ -0.38
YIPF3-207ENST00000488966 TCP11L1Q9NUJ3 509 aa12.69□□□□□ -0.38
YIPF3-207ENST00000488966 RAD50Q92878 1312 aa12.68□□□□□ -0.38
YIPF3-207ENST00000488966 GBF1Q92538 1859 aa12.68□□□□□ -0.38
YIPF3-207ENST00000488966 TXNP10599 105 aaKnown RBP12.68□□□□□ -0.38
YIPF3-207ENST00000488966 PLA2G5P39877 138 aa12.68□□□□□ -0.38
YIPF3-207ENST00000488966 CHMP4BP1P59074 171 aa12.68□□□□□ -0.38
YIPF3-207ENST00000488966 PTPN11Q06124 597 aaPredicted RBP12.68□□□□□ -0.38
YIPF3-207ENST00000488966 ZNF543Q08ER8 600 aa12.68□□□□□ -0.38
YIPF3-207ENST00000488966 BFSP2Q13515 415 aa12.68□□□□□ -0.38
YIPF3-207ENST00000488966 DNERQ8NFT8 737 aa12.68□□□□□ -0.38
YIPF3-207ENST00000488966 CTAGE1Q96RT6 745 aa12.68□□□□□ -0.38
YIPF3-207ENST00000488966 WDR19Q8NEZ3 1342 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 KIF28PB7ZC32 967 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 LPXNO60711 386 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 SNHG28P0DPA3 235 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 GRB10Q13322 594 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 GPNMBQ14956 572 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 PTGISQ16647 500 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 CCDC62Q6P9F0 684 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 TMCO2Q7Z6W1 182 aaPredicted RBP12.67□□□□□ -0.38
YIPF3-207ENST00000488966 AFG1LQ8WV93 481 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 EVI5LQ96CN4 794 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 FAM227BQ96M60 508 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 MPHOSPH6Q99547 160 aaKnown RBP12.67□□□□□ -0.38
YIPF3-207ENST00000488966 C1QTNF1Q9BXJ1 281 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 EPHX3Q9H6B9 360 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 HELLSQ9NRZ9 838 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 PNMA2Q9UL42 364 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 COG5Q9UP83 839 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 NOD1Q9Y239 953 aa12.67□□□□□ -0.38
YIPF3-207ENST00000488966 A0A0D9SFI3 127 aa12.66□□□□□ -0.38
YIPF3-207ENST00000488966 LCHNA4D1U4 455 aa12.66□□□□□ -0.38
YIPF3-207ENST00000488966 RBAK-RBAKDNI3L0D1 243 aa12.66□□□□□ -0.38
YIPF3-207ENST00000488966 TLL1O43897 1013 aa12.66□□□□□ -0.38
YIPF3-207ENST00000488966 BAIAP3O94812 1187 aa12.66□□□□□ -0.38
YIPF3-207ENST00000488966 HAND2P61296 217 aa12.66□□□□□ -0.38
YIPF3-207ENST00000488966 USH1GQ495M9 461 aa12.66□□□□□ -0.38
YIPF3-207ENST00000488966 GDF6Q6KF10 455 aaPredicted RBP12.66□□□□□ -0.38
YIPF3-207ENST00000488966 TBC1D5Q92609 795 aa12.66□□□□□ -0.38
YIPF3-207ENST00000488966 FAM122AQ96E09 287 aa12.66□□□□□ -0.38
YIPF3-207ENST00000488966 TTC14Q96N46 770 aa12.66□□□□□ -0.38
YIPF3-207ENST00000488966 CPVLQ9H3G5 476 aa12.66□□□□□ -0.38
YIPF3-207ENST00000488966 MMP3P08254 477 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 GOLGA8HP0CJ92 632 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 HSPD1P10809 573 aaKnown RBP12.65□□□□□ -0.38
YIPF3-207ENST00000488966 WDR5P61964 334 aaKnown RBP12.65□□□□□ -0.38
YIPF3-207ENST00000488966 ARHGAP1Q07960 439 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 LY6KQ17RY6 165 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 MCMDC2Q4G0Z9 681 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 ANKRD45Q5TZF3 282 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 SEPT14Q6ZU15 432 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 ZNF589Q86UQ0 364 aaPredicted RBP12.65□□□□□ -0.38
YIPF3-207ENST00000488966 SESTD1Q86VW0 696 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 TBC1D10CQ8IV04 446 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 RGS22Q8NE09 1264 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 CAGE1Q8TC20 777 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 AFAP1L1Q8TED9 768 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 DHX38Q92620 1227 aaKnown RBP12.65□□□□□ -0.38
YIPF3-207ENST00000488966 KAT2BQ92831 832 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 HLA-CQ95604 372 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 COL20A1Q9P218 1284 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 XIRP2A4UGR9 3374 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 PRRC2BQ5JSZ5 2229 aaKnown RBP12.65□□□□□ -0.38
YIPF3-207ENST00000488966 SCN10AQ9Y5Y9 1956 aa12.65□□□□□ -0.38
YIPF3-207ENST00000488966 SCN5AQ14524 2016 aa12.64□□□□□ -0.39
YIPF3-207ENST00000488966 TCF20Q9UGU0 1960 aaKnown RBP12.64□□□□□ -0.39
YIPF3-207ENST00000488966 B4DLN1 442 aa12.64□□□□□ -0.39
YIPF3-207ENST00000488966 SELPP16109 830 aa12.64□□□□□ -0.39
YIPF3-207ENST00000488966 KCNJ6P48051 423 aa12.64□□□□□ -0.39
YIPF3-207ENST00000488966 MRPL12P52815 198 aaKnown RBP12.64□□□□□ -0.39
YIPF3-207ENST00000488966 PDE1AP54750 535 aa12.64□□□□□ -0.39
YIPF3-207ENST00000488966 DEFB103AP81534 67 aa12.64□□□□□ -0.39
YIPF3-207ENST00000488966 TCTN1Q2MV58 587 aa12.64□□□□□ -0.39
YIPF3-207ENST00000488966 MFSD6Q6ZSS7 791 aa12.64□□□□□ -0.39
YIPF3-207ENST00000488966 LRRC8DQ7L1W4 858 aa12.64□□□□□ -0.39
YIPF3-207ENST00000488966 SYTL5Q8TDW5 730 aaPredicted RBP12.64□□□□□ -0.39
YIPF3-207ENST00000488966 TAAR1Q96RJ0 339 aa12.64□□□□□ -0.39
YIPF3-207ENST00000488966 ZKSCAN3Q9BRR0 538 aa12.64□□□□□ -0.39
YIPF3-207ENST00000488966 LRFN3Q9BTN0 628 aa12.64□□□□□ -0.39
YIPF3-207ENST00000488966 UBA5Q9GZZ9 404 aa12.64□□□□□ -0.39
YIPF3-207ENST00000488966 NBNO60934 754 aa12.63□□□□□ -0.39
YIPF3-207ENST00000488966 GH1P01241 217 aa12.63□□□□□ -0.39
YIPF3-207ENST00000488966 NMIQ13287 307 aaPredicted RBP12.63□□□□□ -0.39
YIPF3-207ENST00000488966 GPATCH4Q5T3I0 446 aaKnown RBP12.63□□□□□ -0.39
YIPF3-207ENST00000488966 CHST3Q7LGC8 479 aa12.63□□□□□ -0.39
YIPF3-207ENST00000488966 CCDC155Q8N6L0 562 aa12.63□□□□□ -0.39
YIPF3-207ENST00000488966 GDPD5Q8WTR4 605 aa12.63□□□□□ -0.39
YIPF3-207ENST00000488966 KHSRPQ92945 711 aaKnown RBP eCLIP12.63□□□□□ -0.39
YIPF3-207ENST00000488966 ZBED2Q9BTP6 218 aa12.63□□□□□ -0.39
YIPF3-207ENST00000488966 ZMYM6O95789 1325 aa12.62□□□□□ -0.39
YIPF3-207ENST00000488966 NEDD4P46934 1319 aa12.62□□□□□ -0.39
YIPF3-207ENST00000488966 CXCL10P02778 98 aa12.62□□□□□ -0.39
YIPF3-207ENST00000488966 PCP11498 1178 aaKnown RBP12.62□□□□□ -0.39
YIPF3-207ENST00000488966 CKBP12277 381 aa12.62□□□□□ -0.39
YIPF3-207ENST00000488966 CASTP20810 708 aaKnown RBP12.62□□□□□ -0.39
YIPF3-207ENST00000488966 RBL2Q08999 1139 aa12.62□□□□□ -0.39
YIPF3-207ENST00000488966 CDC37Q16543 378 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms