RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 TAAR1Q96RJ0 339 aa12.92□□□□□ -0.34
ARHGEF39-204ENST00000488918 UBE2OQ9C0C9 1292 aaKnown RBP12.92□□□□□ -0.34
ARHGEF39-204ENST00000488918 PDGFCQ9NRA1 345 aa12.92□□□□□ -0.34
ARHGEF39-204ENST00000488918 POLR3EQ9NVU0 708 aa12.92□□□□□ -0.34
ARHGEF39-204ENST00000488918 SNX14Q9Y5W7 946 aa12.92□□□□□ -0.34
ARHGEF39-204ENST00000488918 MRVI1Q9Y6F6 885 aa12.92□□□□□ -0.34
ARHGEF39-204ENST00000488918 CENPFP49454 3210 aa12.92□□□□□ -0.34
ARHGEF39-204ENST00000488918 ZNFX1Q9P2E3 1918 aaKnown RBP12.92□□□□□ -0.34
ARHGEF39-204ENST00000488918 ELP1O95163 1332 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 PLXNA1Q9UIW2 1896 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 EIF3JO75822 258 aaKnown RBP12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 NR3C2P08235 984 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 MYL3P08590 195 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 CST5P28325 142 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 HSD17B4P51659 736 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 CHMP4BP1P59074 171 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 BEX3Q00994 111 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 ADCK5Q3MIX3 580 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 GNPTABQ3T906 1256 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 TRIM60Q495X7 471 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 KCNV1Q6PIU1 500 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 Q6ZUG5 572 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 CMTR1Q8N1G2 835 aaKnown RBP12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 MORC4Q8TE76 937 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 MTMR8Q96EF0 704 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 SEZ6LQ9BYH1 1024 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 UPF3AQ9H1J1 476 aaKnown RBP12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 PSTPIP2Q9H939 334 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 PXMP2Q9NR77 195 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 TMEM39AQ9NV64 488 aa12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 COLQQ9Y215 455 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF39-204ENST00000488918 SPDYE3A6NKU9 549 aa12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 CPLX1O14810 134 aa12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 KPNA6O60684 536 aa12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 PLEKHA8P1O95397 391 aa12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 RPS6KB1P23443 525 aa12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 RCAN1P53805 252 aa12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 NAPAP54920 295 aa12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 EXOSC10Q01780 885 aaKnown RBP12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 HABP4Q5JVS0 413 aaKnown RBP12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 TAPT1Q6NXT6 567 aa12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 CPLX2Q6PUV4 134 aaKnown RBP12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 TMTC3Q6ZXV5 915 aa12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 SRBD1Q8N5C6 995 aaKnown RBP12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 KLHDC9Q8NEP7 349 aa12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 CCDC12Q8WUD4 166 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 TBC1D5Q92609 795 aa12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 BRF1Q92994 677 aa12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 DDX49Q9Y6V7 483 aaKnown RBP12.9□□□□□ -0.34
ARHGEF39-204ENST00000488918 hCG_1984214I3L0E3 225 aa12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 CYTH3O43739 400 aa12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 GH1P01241 217 aa12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 CLTBP09497 229 aa12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 RAG1P15918 1043 aa12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 EDNRBP24530 442 aa12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 MDM2Q00987 491 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 TLE2Q04725 743 aa12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 APOBRQ0VD83 1088 aa12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 C1orf53Q5VUE5 145 aa12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 CXCL17Q6UXB2 119 aa12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 RUFY3Q7L099 469 aa12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 ZNF713Q8N859 430 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 KATNBL1Q9H079 304 aa12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 GLT8D2Q9H1C3 349 aa12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 GNEQ9Y223 722 aaKnown RBP12.89□□□□□ -0.35
ARHGEF39-204ENST00000488918 ASTN1O14525 1302 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 A0A1W2PPC1 479 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 MYADML2A6NDP7 307 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 ARVCFO00192 962 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 PPP1R11O60927 126 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 STAM2O75886 525 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 CPA1P15085 419 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 MAGEA10P43363 369 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 PGM5Q15124 567 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 FAM47CQ5HY64 1035 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 NLRX1Q86UT6 975 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 DHX37Q8IY37 1157 aaKnown RBP12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 TRIM22Q8IYM9 498 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 PDCD2LQ9BRP1 358 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 USP26Q9BXU7 913 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 MLXIPQ9HAP2 919 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 PDRG1Q9NUG6 133 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 NOD1Q9Y239 953 aa12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 V9GY48 417 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF39-204ENST00000488918 PDE4DIPQ5VU43 2346 aa12.87□□□□□ -0.35
ARHGEF39-204ENST00000488918 hCG_1642624A0A1W2PR95 340 aa12.87□□□□□ -0.35
ARHGEF39-204ENST00000488918 RBM47A0AV96 593 aaKnown RBP12.87□□□□□ -0.35
ARHGEF39-204ENST00000488918 NOP56O00567 594 aaKnown RBP12.87□□□□□ -0.35
ARHGEF39-204ENST00000488918 ADCY6O43306 1168 aa12.87□□□□□ -0.35
ARHGEF39-204ENST00000488918 ADCY7P51828 1080 aa12.87□□□□□ -0.35
ARHGEF39-204ENST00000488918 ITGA7Q13683 1181 aa12.87□□□□□ -0.35
ARHGEF39-204ENST00000488918 LAMC2Q13753 1193 aa12.87□□□□□ -0.35
ARHGEF39-204ENST00000488918 LY6KQ17RY6 165 aa12.87□□□□□ -0.35
ARHGEF39-204ENST00000488918 XRRA1Q6P2D8 792 aa12.87□□□□□ -0.35
ARHGEF39-204ENST00000488918 KCNB2Q92953 911 aa12.87□□□□□ -0.35
ARHGEF39-204ENST00000488918 TOX2Q96NM4 488 aa12.87□□□□□ -0.35
ARHGEF39-204ENST00000488918 MTG1Q9BT17 334 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF39-204ENST00000488918 COL20A1Q9P218 1284 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms