RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 SYT3Q9BQG1 590 aa7.25□□□□□ -1.25
CTNNB1-215ENST00000488914 B2RBV5 119 aa7.24□□□□□ -1.25
CTNNB1-215ENST00000488914 ARNTLO00327 626 aa7.24□□□□□ -1.25
CTNNB1-215ENST00000488914 NTRK1P04629 796 aa7.24□□□□□ -1.25
CTNNB1-215ENST00000488914 GTF2IRD2BQ6EKJ0 949 aa7.24□□□□□ -1.25
CTNNB1-215ENST00000488914 GTF2IRD2Q86UP8 949 aa7.24□□□□□ -1.25
CTNNB1-215ENST00000488914 SP8Q8IXZ3 490 aa7.24□□□□□ -1.25
CTNNB1-215ENST00000488914 PLEKHO2Q8TD55 490 aa7.24□□□□□ -1.25
CTNNB1-215ENST00000488914 USP33Q8TEY7 942 aa7.24□□□□□ -1.25
CTNNB1-215ENST00000488914 PPP1R14AQ96A00 147 aa7.24□□□□□ -1.25
CTNNB1-215ENST00000488914 TSPAN17Q96FV3 270 aa7.24□□□□□ -1.25
CTNNB1-215ENST00000488914 MRGPRX3Q96LB0 322 aa7.24□□□□□ -1.25
CTNNB1-215ENST00000488914 FAN1Q9Y2M0 1017 aa7.24□□□□□ -1.25
CTNNB1-215ENST00000488914 PMF1-BGLAPU3KQ54 211 aa7.24□□□□□ -1.25
CTNNB1-215ENST00000488914 CAP1Q01518 475 aa7.23□□□□□ -1.25
CTNNB1-215ENST00000488914 SKOR2Q2VWA4 1001 aaPredicted RBP7.23□□□□□ -1.25
CTNNB1-215ENST00000488914 WWC2Q6AWC2 1192 aa7.23□□□□□ -1.25
CTNNB1-215ENST00000488914 C6orf15Q6UXA7 325 aaPredicted RBP7.23□□□□□ -1.25
CTNNB1-215ENST00000488914 B3GNT8Q7Z7M8 397 aa7.23□□□□□ -1.25
CTNNB1-215ENST00000488914 CABP7Q86V35 215 aa7.23□□□□□ -1.25
CTNNB1-215ENST00000488914 TRIM59Q8IWR1 403 aa7.23□□□□□ -1.25
CTNNB1-215ENST00000488914 NETO2Q8NC67 525 aa7.23□□□□□ -1.25
CTNNB1-215ENST00000488914 FRS2Q8WU20 508 aa7.23□□□□□ -1.25
CTNNB1-215ENST00000488914 SPATA25Q9BR10 227 aa7.23□□□□□ -1.25
CTNNB1-215ENST00000488914 RNF38Q9H0F5 515 aa7.23□□□□□ -1.25
CTNNB1-215ENST00000488914 STRIP2Q9ULQ0 834 aa7.23□□□□□ -1.25
CTNNB1-215ENST00000488914 PRICKLE3O43900 615 aaPredicted RBP7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 NPHS1O60500 1241 aa7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 SYN1P17600 705 aa7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 LIPIQ6XZB0 460 aa7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 SAPCD2Q86UD0 394 aa7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 TEX2Q8IWB9 1127 aa7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 NLGN1Q8N2Q7 840 aa7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 SMARCC2Q8TAQ2 1214 aa7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 CXorf38Q8TB03 319 aa7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 MICAL1Q8TDZ2 1067 aa7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 PEX11GQ96HA9 241 aa7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 MMP19Q99542 508 aa7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 BTG4Q9NY30 223 aa7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 MARCH2Q9P0N8 246 aa7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 TMEFF2Q9UIK5 374 aaPredicted RBP7.22□□□□□ -1.25
CTNNB1-215ENST00000488914 ETFBP38117 255 aa7.21□□□□□ -1.26
CTNNB1-215ENST00000488914 KCNC1P48547 511 aa7.21□□□□□ -1.26
CTNNB1-215ENST00000488914 NCAPHQ15003 741 aa7.21□□□□□ -1.26
CTNNB1-215ENST00000488914 LARP1BQ659C4 914 aaKnown RBP7.21□□□□□ -1.26
CTNNB1-215ENST00000488914 NPLOC4Q8TAT6 608 aa7.21□□□□□ -1.26
CTNNB1-215ENST00000488914 BTN2A2Q8WVV5 523 aa7.21□□□□□ -1.26
CTNNB1-215ENST00000488914 NKX2-4Q9H2Z4 354 aa7.21□□□□□ -1.26
CTNNB1-215ENST00000488914 CYP26B1Q9NR63 512 aa7.21□□□□□ -1.26
CTNNB1-215ENST00000488914 TRBV23OR9-2A0A075B6M9 112 aa7.2□□□□□ -1.26
CTNNB1-215ENST00000488914 NOP56O00567 594 aaKnown RBP7.2□□□□□ -1.26
CTNNB1-215ENST00000488914 IGSF3O75054 1194 aa7.2□□□□□ -1.26
CTNNB1-215ENST00000488914 KRTAP10-2P60368 255 aa7.2□□□□□ -1.26
CTNNB1-215ENST00000488914 SF1Q15637 639 aaKnown RBP7.2□□□□□ -1.26
CTNNB1-215ENST00000488914 MRM1Q6IN84 353 aaKnown RBP7.2□□□□□ -1.26
CTNNB1-215ENST00000488914 POMZP3Q6PJE2 187 aa7.2□□□□□ -1.26
CTNNB1-215ENST00000488914 CCDC103Q8IW40 242 aa7.2□□□□□ -1.26
CTNNB1-215ENST00000488914 FAM178BQ8IXR5 827 aa7.2□□□□□ -1.26
CTNNB1-215ENST00000488914 UBE2Q2Q8WVN8 375 aa7.2□□□□□ -1.26
CTNNB1-215ENST00000488914 DDX11Q96FC9 970 aa7.2□□□□□ -1.26
CTNNB1-215ENST00000488914 PUS7Q96PZ0 661 aaKnown RBP7.2□□□□□ -1.26
CTNNB1-215ENST00000488914 SPATA6Q9NWH7 488 aaPredicted RBP7.2□□□□□ -1.26
CTNNB1-215ENST00000488914 ITGAVP06756 1048 aa7.19□□□□□ -1.26
CTNNB1-215ENST00000488914 C8BP07358 591 aa7.19□□□□□ -1.26
CTNNB1-215ENST00000488914 ERCC5P28715 1186 aaPredicted RBP7.19□□□□□ -1.26
CTNNB1-215ENST00000488914 ZNF143P52747 638 aaPredicted RBP7.19□□□□□ -1.26
CTNNB1-215ENST00000488914 CACNB2Q08289 660 aaPredicted RBP7.19□□□□□ -1.26
CTNNB1-215ENST00000488914 FRMD5Q7Z6J6 570 aa7.19□□□□□ -1.26
CTNNB1-215ENST00000488914 ZNF428Q96B54 188 aa7.19□□□□□ -1.26
CTNNB1-215ENST00000488914 CAPN10Q9HC96 672 aa7.19□□□□□ -1.26
CTNNB1-215ENST00000488914 ACTR10Q9NZ32 417 aa7.19□□□□□ -1.26
CTNNB1-215ENST00000488914 NUDT5Q9UKK9 219 aa7.19□□□□□ -1.26
CTNNB1-215ENST00000488914 SH3D21A4FU49 640 aa7.18□□□□□ -1.26
CTNNB1-215ENST00000488914 SGSM2O43147 1006 aa7.18□□□□□ -1.26
CTNNB1-215ENST00000488914 FPR2P25090 351 aa7.18□□□□□ -1.26
CTNNB1-215ENST00000488914 SLC9A5Q14940 896 aa7.18□□□□□ -1.26
CTNNB1-215ENST00000488914 PRSS53Q2L4Q9 553 aa7.18□□□□□ -1.26
CTNNB1-215ENST00000488914 NT5DC1Q5TFE4 455 aa7.18□□□□□ -1.26
CTNNB1-215ENST00000488914 FAM26EQ8N5C1 309 aa7.18□□□□□ -1.26
CTNNB1-215ENST00000488914 CPA5Q8WXQ8 436 aa7.18□□□□□ -1.26
CTNNB1-215ENST00000488914 TEPSINQ96N21 525 aa7.18□□□□□ -1.26
CTNNB1-215ENST00000488914 FBXL7Q9UJT9 491 aa7.18□□□□□ -1.26
CTNNB1-215ENST00000488914 C22orf46C9J442 243 aa7.17□□□□□ -1.26
CTNNB1-215ENST00000488914 ZBTB7AO95365 584 aa7.17□□□□□ -1.26
CTNNB1-215ENST00000488914 SSBP05455 408 aaKnown RBP eCLIP7.17□□□□□ -1.26
CTNNB1-215ENST00000488914 ECI1P42126 302 aa7.17□□□□□ -1.26
CTNNB1-215ENST00000488914 SMAD4Q13485 552 aaKnown RBP7.17□□□□□ -1.26
CTNNB1-215ENST00000488914 RTP5Q14D33 572 aa7.17□□□□□ -1.26
CTNNB1-215ENST00000488914 SV2CQ496J9 727 aa7.17□□□□□ -1.26
CTNNB1-215ENST00000488914 FERMT3Q86UX7 667 aa7.17□□□□□ -1.26
CTNNB1-215ENST00000488914 ZNF227Q86WZ6 799 aa7.17□□□□□ -1.26
CTNNB1-215ENST00000488914 CRACR2BQ8N4Y2 399 aaPredicted RBP7.17□□□□□ -1.26
CTNNB1-215ENST00000488914 KREMEN2Q8NCW0 462 aa7.17□□□□□ -1.26
CTNNB1-215ENST00000488914 DUSP10Q9Y6W6 482 aa7.17□□□□□ -1.26
CTNNB1-215ENST00000488914 SUSD5O60279 629 aa7.16□□□□□ -1.26
CTNNB1-215ENST00000488914 NAT2P11245 290 aa7.16□□□□□ -1.26
CTNNB1-215ENST00000488914 BCL6P41182 706 aa7.16□□□□□ -1.26
CTNNB1-215ENST00000488914 DENND5AQ6IQ26 1287 aa7.16□□□□□ -1.26
CTNNB1-215ENST00000488914 STK32CQ86UX6 486 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms