RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 GGA1Q9UJY5 639 aa14.16□□□□□ -0.14
CLIC4-202ENST00000488683 FOCADQ5VW36 1801 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 SERPINB2P05120 415 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 MATR3P43243 847 aaKnown RBP eCLIP14.15□□□□□ -0.14
CLIC4-202ENST00000488683 NT5C2P49902 561 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 CRY2Q49AN0 593 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 BEND6Q5SZJ8 279 aaPredicted RBP14.15□□□□□ -0.14
CLIC4-202ENST00000488683 FNBP4Q8N3X1 1017 aaPredicted RBP14.15□□□□□ -0.14
CLIC4-202ENST00000488683 TBC1D16Q8TBP0 767 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 RIN2Q8WYP3 895 aaPredicted RBP14.15□□□□□ -0.14
CLIC4-202ENST00000488683 TTYH3Q9C0H2 523 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 C6orf50Q9HD87 102 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 LRWD1Q9UFC0 647 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 DAGLAQ9Y4D2 1042 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 PDE2AO00408 941 aaPredicted RBP14.15□□□□□ -0.14
CLIC4-202ENST00000488683 MYL1P05976 194 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 AMPD2Q01433 879 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 CALCRLQ16602 461 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 CERS5Q8N5B7 392 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 MMRN2Q9H8L6 949 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 VPS18Q9P253 973 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 CAPN11Q9UMQ6 739 aa14.15□□□□□ -0.14
CLIC4-202ENST00000488683 A0A1W2PQC6 194 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 CTAGE15A4D2H0 777 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 USP17L15C9J2P7 530 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 USP17L13C9JLJ4 530 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 USP17L11C9JVI0 530 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 USP17L18D6R9N7 530 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 USP17L22D6RA61 530 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 USP17L17D6RBQ6 530 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 USP17L19D6RCP7 530 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 USP17L20D6RJB6 530 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 CTAGE8P0CG41 777 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 C2orf54Q08AI8 447 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 USP17L24Q0WX57 530 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 NFIAQ12857 509 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 STIM1Q13586 685 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 EZH2Q15910 746 aaKnown RBP14.14□□□□□ -0.15
CLIC4-202ENST00000488683 PTPROQ16827 1216 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 USP17L6PQ6QN14 398 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 CTAGE6Q86UF2 777 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 CTAGE4Q8IX94 777 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 NELFCDQ8IXH7 590 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 CRACR2AQ9BSW2 395 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.14□□□□□ -0.15
CLIC4-202ENST00000488683 ADAMTSL1Q8N6G6 1762 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 LRRIQ3A6PVS8 624 aaPredicted RBP14.14□□□□□ -0.15
CLIC4-202ENST00000488683 USP17L10C9JJH3 530 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 NCK2O43639 380 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 SRGNP10124 158 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 GYS1P13807 737 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 CCNE1P24864 410 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 GNA11P29992 359 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 STAT3P40763 770 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 C2CD5Q86YS7 1000 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 JAKMIP2Q96AA8 810 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 AK8Q96MA6 479 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 C7orf25Q9BPX7 421 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 ZNF287Q9HBT7 754 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 GAKO14976 1311 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 UBR3Q6ZT12 1888 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 MYBL2P10244 700 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 NOVP48745 357 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 HNRNPH2P55795 449 aaKnown RBP14.14□□□□□ -0.15
CLIC4-202ENST00000488683 DDR1Q08345 913 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 CEP112Q8N8E3 955 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 CERKQ8TCT0 537 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 SNX29Q8TEQ0 813 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 DHTKD1Q96HY7 919 aaPredicted RBP14.14□□□□□ -0.15
CLIC4-202ENST00000488683 RIOX1Q9H6W3 641 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 NLRC4Q9NPP4 1024 aa14.14□□□□□ -0.15
CLIC4-202ENST00000488683 ATP2B4P23634 1241 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 CYP2C19P33261 490 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 ARID5AQ03989 594 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 ADGRF4Q8IZF3 695 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 ZHX3Q9H4I2 956 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 JADE2Q9NQC1 790 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 CAPN6Q9Y6Q1 641 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 CCDC151A5D8V7 595 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 E9PMD0 336 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 MOCS3O95396 460 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 LMAN1P49257 510 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 DNM2P50570 870 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 FAM193AP78312 1265 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 PPARDQ03181 441 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 CCDC96Q2M329 555 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 MTMR9Q96QG7 549 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 TANGO6Q9C0B7 1094 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 CUEDC2Q9H467 287 aa14.13□□□□□ -0.15
CLIC4-202ENST00000488683 UBAP1LF5GYI3 381 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 TOM1O60784 492 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 TSR1Q2NL82 804 aaKnown RBP14.12□□□□□ -0.15
CLIC4-202ENST00000488683 DDX12PQ92771 950 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 CCDC102AQ96A19 550 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 FAM163AQ96GL9 167 aaPredicted RBP14.12□□□□□ -0.15
CLIC4-202ENST00000488683 CDK5RAP3Q96JB5 506 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 MTMR4Q9NYA4 1195 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 SALL4Q9UJQ4 1053 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 FAN1Q9Y2M0 1017 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 ATP8B1O43520 1251 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms