RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 RNPC3Q96LT9 517 aaKnown RBP13.08□□□□□ -0.32
RAB11FIP3-210ENST00000487899 MAF1Q9H063 256 aa13.08□□□□□ -0.32
RAB11FIP3-210ENST00000487899 RBM8AQ9Y5S9 174 aaKnown RBP13.08□□□□□ -0.32
RAB11FIP3-210ENST00000487899 KLRF2D3W0D1 207 aa13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 CYTH3O43739 400 aa13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 DHX16O60231 1041 aaKnown RBP13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 HSD17B4P51659 736 aa13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 TROAPQ12815 778 aa13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 MFSD5Q6N075 450 aa13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 CHST3Q7LGC8 479 aa13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 RALYLQ86SE5 291 aaKnown RBP13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 FBXO11Q86XK2 927 aa13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 OR6J1Q8NGC5 347 aa13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 TAAR1Q96RJ0 339 aa13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.07□□□□□ -0.322e-7■■□□□ 13.3
RAB11FIP3-210ENST00000487899 PPP1R12CQ9BZL4 782 aa13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 LSG1Q9H089 658 aaKnown RBP13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 WNT8AQ9H1J5 351 aa13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 STXBP5LQ9Y2K9 1186 aa13.07□□□□□ -0.32
RAB11FIP3-210ENST00000487899 MICAL3Q7RTP6 2002 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 IFIT3O14879 490 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 ZBTB5O15062 677 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 TLR3O15455 904 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 CSF2RAP15509 400 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 CYP2C18P33260 490 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 CPT1AP50416 773 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 SMAD3P84022 425 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 TRDNQ13061 729 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 RASIP1Q5U651 963 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 CCDC62Q6P9F0 684 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 C16orf59Q7L2K0 433 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 NCOA7Q8NI08 942 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 VTI1AQ96AJ9 217 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 VWCEQ96DN2 955 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 MPHOSPH6Q99547 160 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 NOC4LQ9BVI4 516 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 AMNQ9BXJ7 453 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 TRPV6Q9H1D0 765 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 TTYH1Q9H313 450 aaPredicted RBP13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 GPHNQ9NQX3 736 aaPredicted RBP13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 PXMP2Q9NR77 195 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 XIRP2A4UGR9 3374 aa13.06□□□□□ -0.32
RAB11FIP3-210ENST00000487899 A6NJR5 290 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 NKRFO15226 690 aaKnown RBP eCLIP13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 ZEB2O60315 1214 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 EIF2AK2P19525 551 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 ARHGAP1Q07960 439 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 WTAPQ15007 396 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 TMEM240Q5SV17 173 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 ZNF697Q5TEC3 545 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 HOMER1Q86YM7 354 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 MCF2L2Q86YR7 1114 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 IL31RAQ8NI17 732 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 FAM161BQ96MY7 647 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 RMDN3Q96TC7 470 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 ESYT1Q9BSJ8 1104 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 ALDH8A1Q9H2A2 487 aaPredicted RBP13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 HIPK3Q9H422 1215 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 RIOX1Q9H6W3 641 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 LY9Q9HBG7 655 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 VAT1LQ9HCJ6 419 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 POLR3EQ9NVU0 708 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 MRPL11Q9Y3B7 192 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 FRMPD4Q14CM0 1322 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 MUC3AQ02505 3323 aa13.05□□□□□ -0.32
RAB11FIP3-210ENST00000487899 WDR81Q562E7 1941 aa13.04□□□□□ -0.32
RAB11FIP3-210ENST00000487899 CFBP00751 764 aa13.04□□□□□ -0.32
RAB11FIP3-210ENST00000487899 TXNP10599 105 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP3-210ENST00000487899 PPIGQ13427 754 aaKnown RBP eCLIP13.04□□□□□ -0.327e-8■□□□□ 10.8
RAB11FIP3-210ENST00000487899 TTLL4Q14679 1199 aa13.04□□□□□ -0.32
RAB11FIP3-210ENST00000487899 TMEM67Q5HYA8 995 aa13.04□□□□□ -0.32
RAB11FIP3-210ENST00000487899 IGDCC4Q8TDY8 1250 aa13.04□□□□□ -0.32
RAB11FIP3-210ENST00000487899 NSUN6Q8TEA1 469 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP3-210ENST00000487899 PPP1R13LQ8WUF5 828 aa13.04□□□□□ -0.32
RAB11FIP3-210ENST00000487899 PIGSQ96S52 555 aa13.04□□□□□ -0.32
RAB11FIP3-210ENST00000487899 MYL10Q9BUA6 226 aa13.04□□□□□ -0.32
RAB11FIP3-210ENST00000487899 SEZ6LQ9BYH1 1024 aa13.04□□□□□ -0.32
RAB11FIP3-210ENST00000487899 TRMT13Q9NUP7 481 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP3-210ENST00000487899 RGS20O76081 388 aa13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 MMP3P08254 477 aa13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 MYL3P08590 195 aa13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 ACRP10323 421 aa13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 HOXA13P31271 388 aaPredicted RBP13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 SART3Q15020 963 aaKnown RBP13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 LY6KQ17RY6 165 aa13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 BMP2KLQ5H9B9 411 aa13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 PSRC1Q6PGN9 363 aaPredicted RBP13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 CENPQQ7L2Z9 268 aaPredicted RBP13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 ZNF654Q8IZM8 581 aa13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 IWS1Q96ST2 819 aa13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 PDCD2LQ9BRP1 358 aa13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 MTG1Q9BT17 334 aaPredicted RBP13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 PCDHA1Q9Y5I3 950 aa13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 MYO9BQ13459 2157 aa13.03□□□□□ -0.32
RAB11FIP3-210ENST00000487899 TMEM265A0A087WTH1 108 aa13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 ERICH2A1L162 156 aa13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 B4DLN1 442 aa13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 SH2B2O14492 632 aaPredicted RBP13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 SLC27A2O14975 620 aa13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 PRC1O43663 620 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms