RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 CRKP46108 304 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 DLGAP5Q15398 846 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 RSPO4Q2I0M5 234 aaPredicted RBP7.9□□□□□ -1.14
SEC22C-215ENST00000487701 CDC37L1Q7L3B6 337 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 WDR66Q8TBY9 1149 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 TP53INP1Q96A56 240 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 DCPSQ96C86 337 aaKnown RBP7.9□□□□□ -1.14
SEC22C-215ENST00000487701 HHIPQ96QV1 700 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 OSMRQ99650 979 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 CCDC8Q9H0W5 538 aaPredicted RBP7.9□□□□□ -1.14
SEC22C-215ENST00000487701 IL1RAPL2Q9NP60 686 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 GNL3LQ9NVN8 582 aaKnown RBP7.9□□□□□ -1.14
SEC22C-215ENST00000487701 HMG20BQ9P0W2 317 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 DENND2AQ9ULE3 1009 aa7.9□□□□□ -1.14
SEC22C-215ENST00000487701 SIPA1L1O43166 1804 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 CNTNAP1P78357 1384 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 CLRN2A0PK11 232 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 CELF2O95319 508 aaKnown RBP7.89□□□□□ -1.15
SEC22C-215ENST00000487701 NOS3P29474 1203 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 ARHGAP4P98171 946 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 HDLBPQ00341 1268 aaKnown RBP7.89□□□□□ -1.15
SEC22C-215ENST00000487701 HSP90AB4PQ58FF6 505 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 NKAPLQ5M9Q1 402 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 AACSQ86V21 672 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 ERC1Q8IUD2 1116 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 GALNT11Q8NCW6 608 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 ZNF384Q8TF68 577 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 CDCA5Q96FF9 252 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 ZKSCAN3Q9BRR0 538 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 AKTIPQ9H8T0 292 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 ZNF408Q9H9D4 720 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 SUGT1Q9Y2Z0 365 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 SUPT16HQ9Y5B9 1047 aaKnown RBP7.89□□□□□ -1.15
SEC22C-215ENST00000487701 ATAD5Q96QE3 1844 aa7.89□□□□□ -1.15
SEC22C-215ENST00000487701 BAZ2AQ9UIF9 1905 aaKnown RBP7.88□□□□□ -1.15
SEC22C-215ENST00000487701 NAV1Q8NEY1 1877 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 MAST3O60307 1309 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 H3BRJ5 948 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 FSCN2O14926 492 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 SMARCA5O60264 1052 aaPredicted RBP7.88□□□□□ -1.15
SEC22C-215ENST00000487701 ALX3O95076 343 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 POLR3DP05423 398 aaPredicted RBP7.88□□□□□ -1.15
SEC22C-215ENST00000487701 CD68P34810 354 aaPredicted RBP7.88□□□□□ -1.15
SEC22C-215ENST00000487701 RBM5P52756 815 aaKnown RBP eCLIP7.88□□□□□ -1.15
SEC22C-215ENST00000487701 TTC39AQ5SRH9 613 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 GORABQ5T7V8 394 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 PRAMEF18Q5VWM3 479 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 APOBEC3HQ6NTF7 200 aaKnown RBP7.88□□□□□ -1.15
SEC22C-215ENST00000487701 APOBEC3FQ8IUX4 373 aaKnown RBP7.88□□□□□ -1.15
SEC22C-215ENST00000487701 SPATA5Q8NB90 893 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 ASAP3Q8TDY4 903 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 TEKT1Q969V4 418 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 KIF1BPQ96EK5 621 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 ZDHHC15Q96MV8 337 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 ADAM19Q9H013 955 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 TDRD3Q9H7E2 651 aaKnown RBP7.88□□□□□ -1.15
SEC22C-215ENST00000487701 ZNF70Q9UC06 446 aaPredicted RBP7.88□□□□□ -1.15
SEC22C-215ENST00000487701 DAGLAQ9Y4D2 1042 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 MYH8P13535 1937 aa7.88□□□□□ -1.15
SEC22C-215ENST00000487701 RFX7Q2KHR2 1363 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 DDX60LQ5H9U9 1706 aaKnown RBP7.87□□□□□ -1.15
SEC22C-215ENST00000487701 RASSF10A6NK89 507 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 RAB11FIP3O75154 756 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 LDHBP07195 334 aaKnown RBP7.87□□□□□ -1.15
SEC22C-215ENST00000487701 UQCRFS1P1P0C7P4 283 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 ECM1Q16610 540 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 HHIPL2Q6UWX4 724 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 SAPCD2Q86UD0 394 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 AGGF1Q8N302 714 aaeCLIP7.87□□□□□ -1.15
SEC22C-215ENST00000487701 TMEM102Q8N9M5 508 aaPredicted RBP7.87□□□□□ -1.15
SEC22C-215ENST00000487701 EXOC6Q8TAG9 804 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 SLC7A3Q8WY07 619 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 ZNF512BQ96KM6 892 aaPredicted RBP7.87□□□□□ -1.15
SEC22C-215ENST00000487701 MRIQ9BWK5 157 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 DEFB129Q9H1M3 183 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 DCTPP1Q9H773 170 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 VEZTQ9HBM0 779 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 ZFYVE28Q9HCC9 887 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 LATS2Q9NRM7 1088 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 BIN2Q9UBW5 565 aaPredicted RBP7.87□□□□□ -1.15
SEC22C-215ENST00000487701 ABCF2Q9UG63 623 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 ABT1Q9ULW3 272 aaKnown RBP7.87□□□□□ -1.15
SEC22C-215ENST00000487701 PTPRFP10586 1907 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 PHIPQ8WWQ0 1821 aa7.87□□□□□ -1.15
SEC22C-215ENST00000487701 GAKO14976 1311 aa7.86□□□□□ -1.15
SEC22C-215ENST00000487701 F8W735 103 aaPredicted RBP7.86□□□□□ -1.15
SEC22C-215ENST00000487701 DYRK3O43781 588 aa7.86□□□□□ -1.15
SEC22C-215ENST00000487701 MYO1BO43795 1136 aa7.86□□□□□ -1.15
SEC22C-215ENST00000487701 CACNB3P54284 484 aa7.86□□□□□ -1.15
SEC22C-215ENST00000487701 MECOMQ03112 1051 aa7.86□□□□□ -1.15
SEC22C-215ENST00000487701 FOXD4L6Q3SYB3 417 aaPredicted RBP7.86□□□□□ -1.15
SEC22C-215ENST00000487701 CCDC158Q5M9N0 1113 aa7.86□□□□□ -1.15
SEC22C-215ENST00000487701 ZMYM1Q5SVZ6 1142 aa7.86□□□□□ -1.15
SEC22C-215ENST00000487701 FOXD4L3Q6VB84 417 aaPredicted RBP7.86□□□□□ -1.15
SEC22C-215ENST00000487701 ACAD11Q709F0 780 aa7.86□□□□□ -1.15
SEC22C-215ENST00000487701 MOB2Q70IA6 237 aa7.86□□□□□ -1.15
SEC22C-215ENST00000487701 CLASRPQ8N2M8 674 aaKnown RBP7.86□□□□□ -1.15
SEC22C-215ENST00000487701 ZGPATQ8N5A5 531 aaKnown RBP7.86□□□□□ -1.15
SEC22C-215ENST00000487701 KLHL23Q8NBE8 558 aa7.86□□□□□ -1.15
SEC22C-215ENST00000487701 MEGF10Q96KG7 1140 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms