RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 FCHSD1Q86WN1 690 aa15.26■□□□□ 0.03
COL4A6-207ENST00000487645 MORC4Q8TE76 937 aa15.26■□□□□ 0.03
COL4A6-207ENST00000487645 C8orf76Q96K31 380 aa15.26■□□□□ 0.03
COL4A6-207ENST00000487645 PURBQ96QR8 312 aaKnown RBP15.26■□□□□ 0.03
COL4A6-207ENST00000487645 TINF2Q9BSI4 451 aa15.26■□□□□ 0.03
COL4A6-207ENST00000487645 PXMP2Q9NR77 195 aa15.26■□□□□ 0.03
COL4A6-207ENST00000487645 FLRT1Q9NZU1 646 aa15.26■□□□□ 0.03
COL4A6-207ENST00000487645 PCDHA4Q9UN74 947 aa15.26■□□□□ 0.03
COL4A6-207ENST00000487645 ASTN1O14525 1302 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 SPDYE3A6NKU9 549 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 M0R2N6 131 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 AP3B2Q13367 1082 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 NPY5RQ15761 445 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 UBE2SQ16763 222 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 ARHGEF16Q5VV41 709 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 MFSD14CQ5VZR4 134 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 BLIDQ8IZY5 108 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 REXO1Q8N1G1 1221 aaKnown RBP15.25■□□□□ 0.03
COL4A6-207ENST00000487645 FBXO18Q8NFZ0 1043 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 TRIB2Q92519 343 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 EHMT1Q9H9B1 1298 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 NRBP1Q9UHY1 535 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 PCDHA6Q9UN73 950 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 KCNJ14Q9UNX9 436 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 PCDHA8Q9Y5H6 950 aa15.25■□□□□ 0.03
COL4A6-207ENST00000487645 CENPFP49454 3210 aa15.24■□□□□ 0.03
COL4A6-207ENST00000487645 FRMPD4Q14CM0 1322 aa15.24■□□□□ 0.03
COL4A6-207ENST00000487645 MMP1P03956 469 aa15.24■□□□□ 0.03
COL4A6-207ENST00000487645 HMGCRP04035 888 aa15.24■□□□□ 0.03
COL4A6-207ENST00000487645 HSP90AA1P07900 732 aaKnown RBP15.24■□□□□ 0.03
COL4A6-207ENST00000487645 ELNP15502 786 aa15.24■□□□□ 0.03
COL4A6-207ENST00000487645 PDCP20941 246 aa15.24■□□□□ 0.03
COL4A6-207ENST00000487645 EDNRBP24530 442 aa15.24■□□□□ 0.03
COL4A6-207ENST00000487645 SLC9C1Q4G0N8 1177 aa15.24■□□□□ 0.03
COL4A6-207ENST00000487645 KRT40Q6A162 431 aa15.24■□□□□ 0.03
COL4A6-207ENST00000487645 XRRA1Q6P2D8 792 aa15.24■□□□□ 0.03
COL4A6-207ENST00000487645 BRMS1Q9HCU9 246 aa15.24■□□□□ 0.03
COL4A6-207ENST00000487645 GJB4Q9NTQ9 266 aa15.24■□□□□ 0.03
COL4A6-207ENST00000487645 BIN2Q9UBW5 565 aaPredicted RBP15.24■□□□□ 0.03
COL4A6-207ENST00000487645 RPTORQ8N122 1335 aa15.23■□□□□ 0.03
COL4A6-207ENST00000487645 SNAI1O95863 264 aaPredicted RBP15.23■□□□□ 0.03
COL4A6-207ENST00000487645 NR3C2P08235 984 aa15.23■□□□□ 0.03
COL4A6-207ENST00000487645 PGM5Q15124 567 aa15.23■□□□□ 0.03
COL4A6-207ENST00000487645 SAFBQ15424 915 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL4A6-207ENST00000487645 STXBP2Q15833 593 aa15.23■□□□□ 0.03
COL4A6-207ENST00000487645 LARP1BQ659C4 914 aaKnown RBP15.23■□□□□ 0.03
COL4A6-207ENST00000487645 ARMCX2Q7L311 632 aa15.23■□□□□ 0.03
COL4A6-207ENST00000487645 VSIG10LQ86VR7 867 aa15.23■□□□□ 0.03
COL4A6-207ENST00000487645 PDCD2LQ9BRP1 358 aa15.23■□□□□ 0.03
COL4A6-207ENST00000487645 ABHD16BQ9H3Z7 469 aa15.23■□□□□ 0.03
COL4A6-207ENST00000487645 TMEM260Q9NX78 707 aa15.23■□□□□ 0.03
COL4A6-207ENST00000487645 ADAMTS3O15072 1205 aa15.22■□□□□ 0.03
COL4A6-207ENST00000487645 EIF3JO75822 258 aaKnown RBP15.22■□□□□ 0.03
COL4A6-207ENST00000487645 STAM2O75886 525 aa15.22■□□□□ 0.03
COL4A6-207ENST00000487645 PDIA4P13667 645 aaKnown RBP15.22■□□□□ 0.03
COL4A6-207ENST00000487645 EIF2AK2P19525 551 aaKnown RBP15.22■□□□□ 0.03
COL4A6-207ENST00000487645 CYP2C19P33261 490 aa15.22■□□□□ 0.03
COL4A6-207ENST00000487645 KRT2P35908 639 aa15.22■□□□□ 0.03
COL4A6-207ENST00000487645 UBXN2AP68543 259 aa15.22■□□□□ 0.03
COL4A6-207ENST00000487645 CACNB2Q08289 660 aaPredicted RBP15.22■□□□□ 0.03
COL4A6-207ENST00000487645 PDE4DQ08499 809 aa15.22■□□□□ 0.03
COL4A6-207ENST00000487645 MAP3K21Q5TCX8 1036 aa15.22■□□□□ 0.03
COL4A6-207ENST00000487645 JAKMIP3Q5VZ66 844 aa15.22■□□□□ 0.03
COL4A6-207ENST00000487645 PCNX4Q63HM2 1172 aa15.22■□□□□ 0.03
COL4A6-207ENST00000487645 ANO3Q9BYT9 981 aa15.22■□□□□ 0.03
COL4A6-207ENST00000487645 MCOLN1Q9GZU1 580 aa15.22■□□□□ 0.03
COL4A6-207ENST00000487645 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.22■□□□□ 0.03
COL4A6-207ENST00000487645 CNPY2Q9Y2B0 182 aa15.22■□□□□ 0.03
COL4A6-207ENST00000487645 LRRC37A2A6NM11 1700 aa15.21■□□□□ 0.03
COL4A6-207ENST00000487645 INHAP05111 366 aa15.21■□□□□ 0.03
COL4A6-207ENST00000487645 CCND2P30279 289 aa15.21■□□□□ 0.03
COL4A6-207ENST00000487645 SREBF1P36956 1147 aa15.21■□□□□ 0.03
COL4A6-207ENST00000487645 GUCY1B3Q02153 619 aa15.21■□□□□ 0.03
COL4A6-207ENST00000487645 ACVR2BQ13705 512 aa15.21■□□□□ 0.03
COL4A6-207ENST00000487645 KRT25Q7Z3Z0 450 aa15.21■□□□□ 0.03
COL4A6-207ENST00000487645 SH3TC2Q8TF17 1288 aa15.21■□□□□ 0.03
COL4A6-207ENST00000487645 ARMC5Q96C12 935 aa15.21■□□□□ 0.03
COL4A6-207ENST00000487645 FOXP1Q9H334 677 aaPredicted RBP15.21■□□□□ 0.03
COL4A6-207ENST00000487645 VTA1Q9NP79 307 aa15.21■□□□□ 0.03
COL4A6-207ENST00000487645 BTBD18B2RXH4 712 aa15.2■□□□□ 0.02
COL4A6-207ENST00000487645 H3BQV1 296 aa15.2■□□□□ 0.02
COL4A6-207ENST00000487645 CYP3A4P08684 503 aa15.2■□□□□ 0.02
COL4A6-207ENST00000487645 MYCLP12524 364 aaPredicted RBP15.2■□□□□ 0.02
COL4A6-207ENST00000487645 ANP32AP39687 249 aaKnown RBP15.2■□□□□ 0.02
COL4A6-207ENST00000487645 USP11P51784 963 aa15.2■□□□□ 0.02
COL4A6-207ENST00000487645 FOSBP53539 338 aa15.2■□□□□ 0.02
COL4A6-207ENST00000487645 IFFO2Q5TF58 517 aa15.2■□□□□ 0.02
COL4A6-207ENST00000487645 DIS3L2Q8IYB7 885 aaKnown RBP15.2■□□□□ 0.02
COL4A6-207ENST00000487645 RASGRP4Q8TDF6 673 aa15.2■□□□□ 0.02
COL4A6-207ENST00000487645 OXER1Q8TDS5 423 aa15.2■□□□□ 0.02
COL4A6-207ENST00000487645 CRYGNQ8WXF5 182 aa15.2■□□□□ 0.02
COL4A6-207ENST00000487645 TNFRSF25Q93038 417 aa15.2■□□□□ 0.02
COL4A6-207ENST00000487645 KATNBL1Q9H079 304 aa15.2■□□□□ 0.02
COL4A6-207ENST00000487645 FOXD4L1Q9NU39 408 aa15.2■□□□□ 0.02
COL4A6-207ENST00000487645 CCDC194A0A1B0GVG4 234 aa15.19■□□□□ 0.02
COL4A6-207ENST00000487645 RBM47A0AV96 593 aaKnown RBP15.19■□□□□ 0.02
COL4A6-207ENST00000487645 ZNF865P0CJ78 1059 aaPredicted RBP15.19■□□□□ 0.02
COL4A6-207ENST00000487645 CYBAP13498 195 aa15.19■□□□□ 0.02
COL4A6-207ENST00000487645 PRKAR2AP13861 404 aaKnown RBP15.19■□□□□ 0.02
COL4A6-207ENST00000487645 MRPS9P82933 396 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms