RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 MTG1Q9BT17 334 aaPredicted RBP14.26□□□□□ -0.13
VPS16-208ENST00000487461 COL25A1Q9BXS0 654 aaPredicted RBP14.26□□□□□ -0.13
VPS16-208ENST00000487461 JMJD4Q9H9V9 463 aa14.26□□□□□ -0.13
VPS16-208ENST00000487461 GPHNQ9NQX3 736 aaPredicted RBP14.26□□□□□ -0.13
VPS16-208ENST00000487461 COL20A1Q9P218 1284 aa14.26□□□□□ -0.13
VPS16-208ENST00000487461 ABCB11O95342 1321 aa14.25□□□□□ -0.13
VPS16-208ENST00000487461 A6NJR5 290 aa14.25□□□□□ -0.13
VPS16-208ENST00000487461 B4DLN1 442 aa14.25□□□□□ -0.13
VPS16-208ENST00000487461 CYP2C9P11712 490 aa14.25□□□□□ -0.13
VPS16-208ENST00000487461 GSPT1P15170 499 aaKnown RBP14.25□□□□□ -0.13
VPS16-208ENST00000487461 MRPL12P52815 198 aaKnown RBP14.25□□□□□ -0.13
VPS16-208ENST00000487461 NBPF20Q3BBV1 942 aa14.25□□□□□ -0.13
VPS16-208ENST00000487461 TTC22Q5TAA0 569 aa14.25□□□□□ -0.13
VPS16-208ENST00000487461 CCDC62Q6P9F0 684 aa14.25□□□□□ -0.13
VPS16-208ENST00000487461 CYB5R4Q7L1T6 521 aa14.25□□□□□ -0.13
VPS16-208ENST00000487461 OTOP2Q7RTS6 562 aa14.25□□□□□ -0.13
VPS16-208ENST00000487461 STAG2Q8N3U4 1231 aa14.25□□□□□ -0.13
VPS16-208ENST00000487461 SCLYQ96I15 445 aa14.25□□□□□ -0.13
VPS16-208ENST00000487461 MAF1Q9H063 256 aa14.25□□□□□ -0.13
VPS16-208ENST00000487461 CNNM2Q9H8M5 875 aa14.25□□□□□ -0.13
VPS16-208ENST00000487461 KPNA6O60684 536 aa14.24□□□□□ -0.13
VPS16-208ENST00000487461 SUPT20HL2P0C7V6 817 aa14.24□□□□□ -0.13
VPS16-208ENST00000487461 TTLL4Q14679 1199 aa14.24□□□□□ -0.13
VPS16-208ENST00000487461 SEC23AQ15436 765 aa14.24□□□□□ -0.13
VPS16-208ENST00000487461 BRDTQ58F21 947 aaPredicted RBP14.24□□□□□ -0.13
VPS16-208ENST00000487461 IFIT1BQ5T764 474 aaKnown RBP14.24□□□□□ -0.13
VPS16-208ENST00000487461 SEPT14Q6ZU15 432 aa14.24□□□□□ -0.13
VPS16-208ENST00000487461 FBXO11Q86XK2 927 aa14.24□□□□□ -0.13
VPS16-208ENST00000487461 MCF2L2Q86YR7 1114 aa14.24□□□□□ -0.13
VPS16-208ENST00000487461 RPUSD2Q8IZ73 545 aaKnown RBP14.24□□□□□ -0.13
VPS16-208ENST00000487461 NSUN6Q8TEA1 469 aaKnown RBP14.24□□□□□ -0.13
VPS16-208ENST00000487461 UBAC1Q9BSL1 405 aa14.24□□□□□ -0.13
VPS16-208ENST00000487461 MRPL11Q9Y3B7 192 aaKnown RBP14.24□□□□□ -0.13
VPS16-208ENST00000487461 CDH23Q9H251 3354 aa14.23□□□□□ -0.13
VPS16-208ENST00000487461 DHX16O60231 1041 aaKnown RBP14.23□□□□□ -0.13
VPS16-208ENST00000487461 PTH1RQ03431 593 aa14.23□□□□□ -0.13
VPS16-208ENST00000487461 LY6KQ17RY6 165 aa14.23□□□□□ -0.13
VPS16-208ENST00000487461 IWS1Q96ST2 819 aa14.23□□□□□ -0.13
VPS16-208ENST00000487461 RMDN3Q96TC7 470 aa14.23□□□□□ -0.13
VPS16-208ENST00000487461 RAD50Q92878 1312 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 UNC80Q8N2C7 3258 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 KLRF2D3W0D1 207 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 OPLAHO14841 1288 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 CHMLP26374 656 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 RAB30Q15771 203 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 STXBP2Q15833 593 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 FAM47CQ5HY64 1035 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 NFRKBQ6P4R8 1299 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 USP38Q8NB14 1042 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 AFG1LQ8WV93 481 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 MTMR8Q96EF0 704 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 MTIF3Q9H2K0 278 aaKnown RBP14.22□□□□□ -0.13
VPS16-208ENST00000487461 NKX2-4Q9H2Z4 354 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 MAD2L2Q9UI95 211 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 MSRAQ9UJ68 235 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 YBX2Q9Y2T7 364 aaKnown RBP14.22□□□□□ -0.13
VPS16-208ENST00000487461 MYO9BQ13459 2157 aa14.22□□□□□ -0.13
VPS16-208ENST00000487461 LAMA4Q16363 1823 aa14.21□□□□□ -0.13
VPS16-208ENST00000487461 PALM3A6NDB9 673 aaPredicted RBP14.21□□□□□ -0.13
VPS16-208ENST00000487461 PPP1R11O60927 126 aaPredicted RBP14.21□□□□□ -0.13
VPS16-208ENST00000487461 CFBP00751 764 aa14.21□□□□□ -0.13
VPS16-208ENST00000487461 GH1P01241 217 aa14.21□□□□□ -0.13
VPS16-208ENST00000487461 CYP21A2P08686 494 aa14.21□□□□□ -0.13
VPS16-208ENST00000487461 EIF2AK2P19525 551 aaKnown RBP14.21□□□□□ -0.13
VPS16-208ENST00000487461 RABGGTBP53611 331 aa14.21□□□□□ -0.13
VPS16-208ENST00000487461 PTPN11Q06124 597 aaPredicted RBP14.21□□□□□ -0.13
VPS16-208ENST00000487461 ARHGAP1Q07960 439 aa14.21□□□□□ -0.13
VPS16-208ENST00000487461 SLC35G1Q2M3R5 365 aa14.21□□□□□ -0.13
VPS16-208ENST00000487461 ARHGEF16Q5VV41 709 aa14.21□□□□□ -0.13
VPS16-208ENST00000487461 DEFB128Q7Z7B8 93 aa14.21□□□□□ -0.13
VPS16-208ENST00000487461 AMNQ9BXJ7 453 aa14.21□□□□□ -0.13
VPS16-208ENST00000487461 PRDM12Q9H4Q4 367 aa14.21□□□□□ -0.13
VPS16-208ENST00000487461 SENP2Q9HC62 589 aa14.21□□□□□ -0.13
VPS16-208ENST00000487461 DDX41Q9UJV9 622 aaKnown RBP14.21□□□□□ -0.13
VPS16-208ENST00000487461 TAF6LQ9Y6J9 622 aa14.21□□□□□ -0.13
VPS16-208ENST00000487461 SLC4A7Q9Y6M7 1214 aa14.21□□□□□ -0.13
VPS16-208ENST00000487461 SCN10AQ9Y5Y9 1956 aa14.2□□□□□ -0.14
VPS16-208ENST00000487461 EIF3JO75822 258 aaKnown RBP14.2□□□□□ -0.14
VPS16-208ENST00000487461 NR3C2P08235 984 aa14.2□□□□□ -0.14
VPS16-208ENST00000487461 MMP3P08254 477 aa14.2□□□□□ -0.14
VPS16-208ENST00000487461 MYOGP15173 224 aa14.2□□□□□ -0.14
VPS16-208ENST00000487461 HSD17B4P51659 736 aa14.2□□□□□ -0.14
VPS16-208ENST00000487461 CHMP4BP1P59074 171 aa14.2□□□□□ -0.14
VPS16-208ENST00000487461 IRX6P78412 446 aaPredicted RBP14.2□□□□□ -0.14
VPS16-208ENST00000487461 ADGRE1Q14246 886 aa14.2□□□□□ -0.14
VPS16-208ENST00000487461 CHST3Q7LGC8 479 aa14.2□□□□□ -0.14
VPS16-208ENST00000487461 RUFY2Q8WXA3 655 aa14.2□□□□□ -0.14
VPS16-208ENST00000487461 KAT2BQ92831 832 aa14.2□□□□□ -0.14
VPS16-208ENST00000487461 PXMP2Q9NR77 195 aa14.2□□□□□ -0.14
VPS16-208ENST00000487461 U3KPZ7 1027 aaPredicted RBP14.2□□□□□ -0.14
VPS16-208ENST00000487461 ZBBXA8MT70 800 aa14.19□□□□□ -0.14
VPS16-208ENST00000487461 IFIT3O14879 490 aaKnown RBP14.19□□□□□ -0.14
VPS16-208ENST00000487461 ZBTB5O15062 677 aa14.19□□□□□ -0.14
VPS16-208ENST00000487461 PFKMP08237 780 aa14.19□□□□□ -0.14
VPS16-208ENST00000487461 IQCF3P0C7M6 154 aa14.19□□□□□ -0.14
VPS16-208ENST00000487461 GHRHRQ02643 423 aa14.19□□□□□ -0.14
VPS16-208ENST00000487461 TRDNQ13061 729 aa14.19□□□□□ -0.14
VPS16-208ENST00000487461 GRM4Q14833 912 aa14.19□□□□□ -0.14
VPS16-208ENST00000487461 PTGISQ16647 500 aa14.19□□□□□ -0.14
VPS16-208ENST00000487461 RETREG2Q8NC44 543 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms