RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 THUMPD2Q9BTF0 503 aaKnown RBP8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 FOXQ1Q9C009 403 aa8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 SEMA6CQ9H3T2 930 aa8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 CCDC85CA6NKD9 419 aa8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 APAF1O14727 1248 aa8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 KCNQ3O43525 872 aa8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 HTATSF1O43719 755 aaKnown RBP8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 YBX3P16989 372 aaKnown RBP eCLIP8.03□□□□□ -1.122e-6■□□□□ 11.2
RTFDC1-209ENST00000487211 GBP1P32455 592 aa8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 CHRNA4P43681 627 aa8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 MAP7Q14244 749 aa8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 DDR2Q16832 855 aa8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 RTF1Q92541 710 aaKnown RBP8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 EZH1Q92800 747 aaPredicted RBP8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 MKL1Q969V6 931 aa8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 CCDC74BQ96LY2 380 aa8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 SRPK1Q96SB4 655 aaKnown RBP8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 KCNF1Q9H3M0 494 aa8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 MAPK8IP3Q9UPT6 1336 aa8.03□□□□□ -1.12
RTFDC1-209ENST00000487211 CEMIPQ8WUJ3 1361 aa8.02□□□□□ -1.13
RTFDC1-209ENST00000487211 CCER2I3L3R5 266 aa8.02□□□□□ -1.13
RTFDC1-209ENST00000487211 DDAH1O94760 285 aa8.02□□□□□ -1.13
RTFDC1-209ENST00000487211 NOP9Q86U38 636 aaKnown RBP8.02□□□□□ -1.13
RTFDC1-209ENST00000487211 CD163Q86VB7 1156 aa8.02□□□□□ -1.13
RTFDC1-209ENST00000487211 FAM20CQ8IXL6 584 aa8.02□□□□□ -1.13
RTFDC1-209ENST00000487211 MFSD2AQ8NA29 543 aa8.02□□□□□ -1.13
RTFDC1-209ENST00000487211 BAHD1Q8TBE0 780 aaPredicted RBP8.02□□□□□ -1.13
RTFDC1-209ENST00000487211 CYB5D2Q8WUJ1 264 aa8.02□□□□□ -1.13
RTFDC1-209ENST00000487211 SMARCC1Q92922 1105 aaPredicted RBP8.02□□□□□ -1.13
RTFDC1-209ENST00000487211 MRFAP1L1Q96HT8 127 aa8.02□□□□□ -1.13
RTFDC1-209ENST00000487211 MIS18AQ9NYP9 233 aa8.02□□□□□ -1.13
RTFDC1-209ENST00000487211 LTBP3Q9NS15 1303 aa8.02□□□□□ -1.13
RTFDC1-209ENST00000487211 FAM95CA0A1B0GW59 222 aa8.01□□□□□ -1.13
RTFDC1-209ENST00000487211 C1QTNF9BB2RNN3 333 aa8.01□□□□□ -1.13
RTFDC1-209ENST00000487211 RGS13O14921 159 aa8.01□□□□□ -1.13
RTFDC1-209ENST00000487211 DHX15O43143 795 aaKnown RBP8.01□□□□□ -1.13
RTFDC1-209ENST00000487211 TEFQ10587 303 aa8.01□□□□□ -1.13
RTFDC1-209ENST00000487211 ITPK1Q13572 414 aa8.01□□□□□ -1.13
RTFDC1-209ENST00000487211 TAF7Q15545 349 aaPredicted RBP8.01□□□□□ -1.13
RTFDC1-209ENST00000487211 NFKBIBQ15653 356 aa8.01□□□□□ -1.13
RTFDC1-209ENST00000487211 MICAL1Q8TDZ2 1067 aa8.01□□□□□ -1.13
RTFDC1-209ENST00000487211 DEPDC7Q96QD5 511 aa8.01□□□□□ -1.13
RTFDC1-209ENST00000487211 CCNL1Q9UK58 526 aaPredicted RBP8.01□□□□□ -1.13
RTFDC1-209ENST00000487211 MAPK8IP1Q9UQF2 711 aa8.01□□□□□ -1.13
RTFDC1-209ENST00000487211 TOGARAM1Q9Y4F4 1720 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 PALLDQ8WX93 1383 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 NHSQ6T4R5 1651 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 BTBD11A6QL63 1104 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 B2RBV5 119 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 DYNC1LI2O43237 492 aaPredicted RBP8□□□□□ -1.13
RTFDC1-209ENST00000487211 CHMP4BP1P59074 171 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 GIMAP6Q6P9H5 292 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 ZNF790Q6PG37 636 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 VHLLQ6RSH7 139 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 C6orf15Q6UXA7 325 aaPredicted RBP8□□□□□ -1.13
RTFDC1-209ENST00000487211 BEND4Q6ZU67 534 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 SMIM5Q71RC9 77 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 FAM178BQ8IXR5 827 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 SLC6A18Q96N87 628 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 MIPEPQ99797 713 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 PHAXQ9H814 394 aaKnown RBP8□□□□□ -1.13
RTFDC1-209ENST00000487211 SNTG2Q9NY99 539 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 STK17AQ9UEE5 414 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 PCDHB10Q9UN67 800 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 DOT1LQ8TEK3 1739 aa8□□□□□ -1.13
RTFDC1-209ENST00000487211 BTAF1O14981 1849 aa7.99□□□□□ -1.13
RTFDC1-209ENST00000487211 UBOX5O94941 541 aa7.99□□□□□ -1.13
RTFDC1-209ENST00000487211 GJB6O95452 261 aa7.99□□□□□ -1.13
RTFDC1-209ENST00000487211 CCNFP41002 786 aa7.99□□□□□ -1.13
RTFDC1-209ENST00000487211 CDK5R2Q13319 367 aa7.99□□□□□ -1.13
RTFDC1-209ENST00000487211 SLC15A2Q16348 729 aa7.99□□□□□ -1.13
RTFDC1-209ENST00000487211 ZNF827Q17R98 1081 aa7.99□□□□□ -1.13
RTFDC1-209ENST00000487211 PAOXQ6QHF9 649 aa7.99□□□□□ -1.13
RTFDC1-209ENST00000487211 TMEM192Q8IY95 271 aa7.99□□□□□ -1.13
RTFDC1-209ENST00000487211 LINC00116Q8NCU8 138 aa7.99□□□□□ -1.13
RTFDC1-209ENST00000487211 ZNF496Q96IT1 587 aaPredicted RBP7.99□□□□□ -1.13
RTFDC1-209ENST00000487211 ITGB4P16144 1822 aa7.99□□□□□ -1.13
RTFDC1-209ENST00000487211 FAM221BA6H8Z2 402 aa7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 SMARCA5O60264 1052 aaPredicted RBP7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 CLEC3AO75596 197 aa7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 GATA4P43694 442 aa7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 RASA3Q14644 834 aa7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 GNPTABQ3T906 1256 aa7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 LETMD1Q6P1Q0 360 aa7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 SEZ6L2Q6UXD5 910 aa7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 AMIGO3Q86WK7 504 aa7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 DNAJC10Q8IXB1 793 aa7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 DHRS1Q96LJ7 313 aa7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 PSMG3-AS1Q96PY0 264 aa7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 SSBP4Q9BWG4 385 aaPredicted RBP7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 CCDC113Q9H0I3 377 aa7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 PRDM10Q9NQV6 1147 aa7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 MSRB2Q9Y3D2 182 aa7.98□□□□□ -1.13
RTFDC1-209ENST00000487211 SZT2Q5T011 3432 aa7.97□□□□□ -1.13
RTFDC1-209ENST00000487211 PRAMEF22A3QJZ6 481 aa7.97□□□□□ -1.13
RTFDC1-209ENST00000487211 CHL1O00533 1208 aa7.97□□□□□ -1.13
RTFDC1-209ENST00000487211 SLITRK5O94991 958 aa7.97□□□□□ -1.13
RTFDC1-209ENST00000487211 SLC7A5Q01650 507 aa7.97□□□□□ -1.13
RTFDC1-209ENST00000487211 LMOD3Q0VAK6 560 aa7.97□□□□□ -1.13
RTFDC1-209ENST00000487211 NCAPHQ15003 741 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms