RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 KCNH4Q9UQ05 1017 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 PTPRFP10586 1907 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 A0A0G2JMZ2 1700 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 RBBP6Q7Z6E9 1792 aaKnown RBP9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 A0A0G2JLL6 359 aaPredicted RBP9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 SPDYE3A6NKU9 549 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 GCOM1H8Y6P7 765 aaPredicted RBP9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 VWA5AO00534 786 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 ACTN4O43707 911 aaKnown RBP9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 SLC37A4O43826 429 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 CYP3A4P08684 503 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 POLR2MP0CAP2 368 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 CIITAP33076 1130 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 HSD17B4P51659 736 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 ARHGAP4P98171 946 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 TYRO3Q06418 890 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 PPIL2Q13356 520 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 COG2Q14746 738 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 LONRF3Q496Y0 759 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 MOB2Q70IA6 237 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 PRRT2Q7Z6L0 340 aaPredicted RBP9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 POTEDQ86YR6 584 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 CKAP2LQ8IYA6 745 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 CNKSR2Q8WXI2 1034 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 ATG4CQ96DT6 458 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 EPSTI1Q96J88 318 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 CLMNQ96JQ2 1002 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 AK8Q96MA6 479 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 AGBL1Q96MI9 1066 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 SDF4Q9BRK5 362 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 PYM1Q9BRP8 204 aaKnown RBP9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 CCSER1Q9C0I3 900 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 ELP3Q9H9T3 547 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 MAP3K20Q9NYL2 800 aaKnown RBP9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 TLL2Q9Y6L7 1015 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 MYH7BA7E2Y1 1941 aa9.74□□□□□ -0.85
NUDCD3-209ENST00000487118 A0A087X0B3 334 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 ATP2A1O14983 1001 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 POLR2DO15514 142 aaKnown RBP9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 HOXA7P31268 230 aaPredicted RBP9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 HOXA13P31271 388 aaPredicted RBP9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 FXR2P51116 673 aaKnown RBP eCLIP9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 MDM2Q00987 491 aaPredicted RBP9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 TTLL12Q14166 644 aaPredicted RBP9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 E2F4Q16254 413 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 CALCRLQ16602 461 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 Q4G0T1 1027 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 KANK3Q6NY19 840 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 SASS6Q6UVJ0 657 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 SH3RF1Q7Z6J0 888 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 MCF2L2Q86YR7 1114 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 IGSF22Q8N9C0 903 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 PROCA1Q8NCQ7 364 aaPredicted RBP9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 CNNM3Q8NE01 707 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 TBC1D5Q92609 795 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 MAF1Q9H063 256 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 EHMT1Q9H9B1 1298 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 ZNF408Q9H9D4 720 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 RAVER2Q9HCJ3 691 aaKnown RBP9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 KCNMB3Q9NPA1 279 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 KIAA1468Q9P260 1216 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 DDX25Q9UHL0 483 aaKnown RBP9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 SERTAD1Q9UHV2 236 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 TUBE1Q9UJT0 475 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 COLQQ9Y215 455 aaPredicted RBP9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 RPTORQ8N122 1335 aa9.73□□□□□ -0.85
NUDCD3-209ENST00000487118 SPDYE16A6NNV3 312 aaPredicted RBP9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 NFIBO00712 420 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 IRF6O14896 467 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 TBX3O15119 743 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 CELF2O95319 508 aaKnown RBP9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 CFBP00751 764 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 SLFN14P0C7P3 912 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 XRCC6P12956 609 aaKnown RBP eCLIP9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 ALAS1P13196 640 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 TXLNAP40222 546 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 MNX1P50219 401 aaPredicted RBP9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 FKBP1BP68106 108 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 MOGSQ13724 837 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 STX1AQ16623 288 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 TKFCQ3LXA3 575 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 SAMD1Q6SPF0 538 aaPredicted RBP9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 CPXCR1Q8N123 301 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 HAS1Q92839 578 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 LENG9Q96B70 501 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 OTUD5Q96G74 571 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 WNK4Q96J92 1243 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 HOXC10Q9NYD6 342 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 HOOK1Q9UJC3 728 aaKnown RBP9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 ZNF214Q9UL59 606 aaPredicted RBP9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 RABGAP1Q9Y3P9 1069 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 CTDP1Q9Y5B0 961 aaPredicted RBP9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 FRMPD4Q14CM0 1322 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 SMCHD1A6NHR9 2005 aa9.72□□□□□ -0.85
NUDCD3-209ENST00000487118 COL11A1P12107 1806 aaPredicted RBP9.71□□□□□ -0.85
NUDCD3-209ENST00000487118 SLC26A4O43511 780 aa9.71□□□□□ -0.86
NUDCD3-209ENST00000487118 CAVIN2O95810 425 aa9.71□□□□□ -0.86
NUDCD3-209ENST00000487118 GJA5P36382 358 aa9.71□□□□□ -0.86
NUDCD3-209ENST00000487118 PDIA5Q14554 519 aa9.71□□□□□ -0.86
NUDCD3-209ENST00000487118 TMEM132BQ14DG7 1078 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms