RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 GPCPD1Q9NPB8 672 aa15.15■□□□□ 0.02
NR1H3-223ENST00000486991 PNMA2Q9UL42 364 aa15.15■□□□□ 0.02
NR1H3-223ENST00000486991 SYNGAP1Q96PV0 1343 aa15.15■□□□□ 0.02
NR1H3-223ENST00000486991 GOLGA8AA7E2F4 631 aa15.14■□□□□ 0.01
NR1H3-223ENST00000486991 LARGE1O95461 756 aa15.14■□□□□ 0.01
NR1H3-223ENST00000486991 ICAM1P05362 532 aa15.14■□□□□ 0.01
NR1H3-223ENST00000486991 C6orf222P0C671 652 aaPredicted RBP15.14■□□□□ 0.01
NR1H3-223ENST00000486991 CALM1P0DP23 149 aa15.14■□□□□ 0.01
NR1H3-223ENST00000486991 CALM2P0DP24 149 aa15.14■□□□□ 0.01
NR1H3-223ENST00000486991 CALM3P0DP25 149 aa15.14■□□□□ 0.01
NR1H3-223ENST00000486991 PDIA3P30101 505 aaKnown RBP15.14■□□□□ 0.01
NR1H3-223ENST00000486991 ANP32AP39687 249 aaKnown RBP15.14■□□□□ 0.01
NR1H3-223ENST00000486991 METAP2P50579 478 aaKnown RBP eCLIP15.14■□□□□ 0.01
NR1H3-223ENST00000486991 EVCP57679 992 aa15.14■□□□□ 0.01
NR1H3-223ENST00000486991 CCT2P78371 535 aaKnown RBP15.14■□□□□ 0.01
NR1H3-223ENST00000486991 GRIN2CQ14957 1233 aa15.14■□□□□ 0.01
NR1H3-223ENST00000486991 CCDC144BQ3MJ40 725 aa15.14■□□□□ 0.01
NR1H3-223ENST00000486991 C16orf59Q7L2K0 433 aa15.14■□□□□ 0.01
NR1H3-223ENST00000486991 ANKRD33Q7Z3H0 272 aa15.14■□□□□ 0.01
NR1H3-223ENST00000486991 ANKRD35Q8N283 1001 aa15.14■□□□□ 0.01
NR1H3-223ENST00000486991 SNX21Q969T3 373 aa15.14■□□□□ 0.01
NR1H3-223ENST00000486991 VTI1AQ96AJ9 217 aa15.14■□□□□ 0.01
NR1H3-223ENST00000486991 ZNF274Q96GC6 653 aaPredicted RBP15.14■□□□□ 0.01
NR1H3-223ENST00000486991 ZSCAN31Q96LW9 406 aaPredicted RBP15.14■□□□□ 0.01
NR1H3-223ENST00000486991 SLKQ9H2G2 1235 aaPredicted RBP15.14■□□□□ 0.01
NR1H3-223ENST00000486991 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.13■□□□□ 0.01
NR1H3-223ENST00000486991 SOWAHBA6NEL2 793 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 GRXCR1A8MXD5 290 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 DCDC2CA8MYV0 355 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 DUSP11O75319 330 aaKnown RBP15.13■□□□□ 0.01
NR1H3-223ENST00000486991 ASGR1P07306 291 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 GOLGA8HP0CJ92 632 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 ALAS1P13196 640 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 FOSL2P15408 326 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 BEX3Q00994 111 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 TROAPQ12815 778 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 ME3Q16798 604 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 SLC35G1Q2M3R5 365 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 ARMCX2Q7L311 632 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 CTCFLQ8NI51 663 aaPredicted RBP15.13■□□□□ 0.01
NR1H3-223ENST00000486991 TRERF1Q96PN7 1200 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.13■□□□□ 0.01
NR1H3-223ENST00000486991 TBX21Q9UL17 535 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 CCPG1Q9ULG6 757 aa15.13■□□□□ 0.01
NR1H3-223ENST00000486991 K7ELQ4 463 aaPredicted RBP15.12■□□□□ 0.01
NR1H3-223ENST00000486991 NFIBO00712 420 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 CTAGE5O15320 804 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 TIMP1P01033 207 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 ACRP10323 421 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 CDK7P50613 346 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 GRM4Q14833 912 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 RTN1Q16799 776 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 GNASQ5JWF2 1037 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 TMEM63BQ5T3F8 832 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 GPATCH4Q5T3I0 446 aaKnown RBP15.12■□□□□ 0.01
NR1H3-223ENST00000486991 NECAB1Q8N987 351 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 USP38Q8NB14 1042 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 CLEC4DQ8WXI8 215 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 TMX3Q96JJ7 454 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 TOX2Q96NM4 488 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 PPP1R12CQ9BZL4 782 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 NCOA5Q9HCD5 579 aaKnown RBP15.12■□□□□ 0.01
NR1H3-223ENST00000486991 SH2B1Q9NRF2 756 aaPredicted RBP15.12■□□□□ 0.01
NR1H3-223ENST00000486991 CYP39A1Q9NYL5 469 aa15.12■□□□□ 0.01
NR1H3-223ENST00000486991 KIAA1217Q5T5P2 1943 aa15.11■□□□□ 0.01
NR1H3-223ENST00000486991 MOXD2PA6NHM9 499 aa15.11■□□□□ 0.01
NR1H3-223ENST00000486991 PFKFB2O60825 505 aa15.11■□□□□ 0.01
NR1H3-223ENST00000486991 PARP1P09874 1014 aaKnown RBP15.11■□□□□ 0.01
NR1H3-223ENST00000486991 CSF2RAP15509 400 aa15.11■□□□□ 0.01
NR1H3-223ENST00000486991 DNAJB2P25686 324 aa15.11■□□□□ 0.01
NR1H3-223ENST00000486991 KIF5BP33176 963 aa15.11■□□□□ 0.01
NR1H3-223ENST00000486991 PBX2P40425 430 aa15.11■□□□□ 0.01
NR1H3-223ENST00000486991 RCAN1P53805 252 aa15.11■□□□□ 0.01
NR1H3-223ENST00000486991 GJA9P57773 515 aa15.11■□□□□ 0.01
NR1H3-223ENST00000486991 BECN1Q14457 450 aa15.11■□□□□ 0.01
NR1H3-223ENST00000486991 CCDC83Q8IWF9 413 aa15.11■□□□□ 0.01
NR1H3-223ENST00000486991 FANCBQ8NB91 859 aa15.11■□□□□ 0.01
NR1H3-223ENST00000486991 GLT1D1Q96MS3 346 aa15.11■□□□□ 0.01
NR1H3-223ENST00000486991 PURBQ96QR8 312 aaKnown RBP15.11■□□□□ 0.01
NR1H3-223ENST00000486991 MAP3K14Q99558 947 aa15.11■□□□□ 0.01
NR1H3-223ENST00000486991 UPF3AQ9H1J1 476 aaKnown RBP15.11■□□□□ 0.01
NR1H3-223ENST00000486991 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.1■□□□□ 0.01
NR1H3-223ENST00000486991 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.1■□□□□ 0.01
NR1H3-223ENST00000486991 CST5P28325 142 aaPredicted RBP15.1■□□□□ 0.01
NR1H3-223ENST00000486991 CDC27P30260 824 aa15.1■□□□□ 0.01
NR1H3-223ENST00000486991 SCRN1Q12765 414 aa15.1■□□□□ 0.01
NR1H3-223ENST00000486991 ASPRV1Q53RT3 343 aa15.1■□□□□ 0.01
NR1H3-223ENST00000486991 TMEM240Q5SV17 173 aa15.1■□□□□ 0.01
NR1H3-223ENST00000486991 MFSD5Q6N075 450 aa15.1■□□□□ 0.01
NR1H3-223ENST00000486991 STAG2Q8N3U4 1231 aa15.1■□□□□ 0.01
NR1H3-223ENST00000486991 GTF3C6Q969F1 213 aa15.1■□□□□ 0.01
NR1H3-223ENST00000486991 UBA5Q9GZZ9 404 aa15.1■□□□□ 0.01
NR1H3-223ENST00000486991 ABHD16BQ9H3Z7 469 aa15.1■□□□□ 0.01
NR1H3-223ENST00000486991 PRDM6Q9NQX0 595 aa15.1■□□□□ 0.01
NR1H3-223ENST00000486991 PDGFCQ9NRA1 345 aa15.1■□□□□ 0.01
NR1H3-223ENST00000486991 RBM28Q9NW13 759 aaKnown RBP15.1■□□□□ 0.01
NR1H3-223ENST00000486991 MAD2L2Q9UI95 211 aa15.1■□□□□ 0.01
NR1H3-223ENST00000486991 CCDC196A0A1B0GTZ2 297 aa15.09■□□□□ 0.01
NR1H3-223ENST00000486991 KLRF2D3W0D1 207 aa15.09■□□□□ 0.01
NR1H3-223ENST00000486991 ARVCFO00192 962 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms