RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 PHOSPHO2Q8TCD6 241 aa23.56■■□□□ 1.36
PHF1-208ENST00000486845 TRANK1O15050 2925 aa23.56■■□□□ 1.36
PHF1-208ENST00000486845 TXNP10599 105 aaKnown RBP23.55■■□□□ 1.36
PHF1-208ENST00000486845 POU3F3P20264 500 aaPredicted RBP23.55■■□□□ 1.36
PHF1-208ENST00000486845 BFSP2Q13515 415 aa23.55■■□□□ 1.36
PHF1-208ENST00000486845 MCMDC2Q4G0Z9 681 aa23.55■■□□□ 1.36
PHF1-208ENST00000486845 TICAM2Q86XR7 235 aa23.55■■□□□ 1.36
PHF1-208ENST00000486845 TTC14Q96N46 770 aa23.55■■□□□ 1.36
PHF1-208ENST00000486845 NOD1Q9Y239 953 aa23.55■■□□□ 1.36
PHF1-208ENST00000486845 IQCF3P0C7M6 154 aa23.54■■□□□ 1.36
PHF1-208ENST00000486845 SNHG28P0DPA3 235 aa23.54■■□□□ 1.36
PHF1-208ENST00000486845 PCP11498 1178 aaKnown RBP23.54■■□□□ 1.36
PHF1-208ENST00000486845 SKIV2LQ15477 1246 aaKnown RBP23.54■■□□□ 1.36
PHF1-208ENST00000486845 ANKRD45Q5TZF3 282 aa23.54■■□□□ 1.36
PHF1-208ENST00000486845 COPS5Q92905 334 aa23.54■■□□□ 1.36
PHF1-208ENST00000486845 FAM227BQ96M60 508 aa23.54■■□□□ 1.36
PHF1-208ENST00000486845 FTOQ9C0B1 505 aaKnown RBP eCLIP23.54■■□□□ 1.36
PHF1-208ENST00000486845 PRRC2BQ5JSZ5 2229 aaKnown RBP23.53■■□□□ 1.36
PHF1-208ENST00000486845 A0A0D9SFI3 127 aa23.53■■□□□ 1.36
PHF1-208ENST00000486845 KIF28PB7ZC32 967 aa23.53■■□□□ 1.36
PHF1-208ENST00000486845 HSPD1P10809 573 aaKnown RBP23.53■■□□□ 1.36
PHF1-208ENST00000486845 BMP1P13497 986 aa23.53■■□□□ 1.36
PHF1-208ENST00000486845 CCDC155Q8N6L0 562 aa23.53■■□□□ 1.36
PHF1-208ENST00000486845 RGS22Q8NE09 1264 aa23.53■■□□□ 1.36
PHF1-208ENST00000486845 MTCH2Q9Y6C9 303 aa23.53■■□□□ 1.36
PHF1-208ENST00000486845 BAIAP3O94812 1187 aa23.52■■□□□ 1.36
PHF1-208ENST00000486845 PDE1AP54750 535 aa23.52■■□□□ 1.36
PHF1-208ENST00000486845 TFF2Q03403 129 aa23.52■■□□□ 1.36
PHF1-208ENST00000486845 GPATCH4Q5T3I0 446 aaKnown RBP23.52■■□□□ 1.36
PHF1-208ENST00000486845 MFSD6Q6ZSS7 791 aa23.52■■□□□ 1.36
PHF1-208ENST00000486845 HERC6Q8IVU3 1022 aa23.52■■□□□ 1.36
PHF1-208ENST00000486845 PPP1R13LQ8WUF5 828 aa23.52■■□□□ 1.36
PHF1-208ENST00000486845 MAF1Q9H063 256 aa23.52■■□□□ 1.36
PHF1-208ENST00000486845 CERS4Q9HA82 394 aa23.52■■□□□ 1.36
PHF1-208ENST00000486845 TCF20Q9UGU0 1960 aaKnown RBP23.51■■□□□ 1.35
PHF1-208ENST00000486845 RFXAPO00287 272 aa23.51■■□□□ 1.35
PHF1-208ENST00000486845 HAND2P61296 217 aa23.51■■□□□ 1.35
PHF1-208ENST00000486845 USH1GQ495M9 461 aa23.51■■□□□ 1.35
PHF1-208ENST00000486845 REV3LO60673 3130 aa23.51■■□□□ 1.35
PHF1-208ENST00000486845 TAP1Q03518 808 aa23.5■■□□□ 1.35
PHF1-208ENST00000486845 CAGE1Q8TC20 777 aa23.5■■□□□ 1.35
PHF1-208ENST00000486845 ARNTL2Q8WYA1 636 aa23.5■■□□□ 1.35
PHF1-208ENST00000486845 NECAB3Q96P71 396 aaPredicted RBP23.5■■□□□ 1.35
PHF1-208ENST00000486845 RNF41Q9H4P4 317 aaPredicted RBP23.5■■□□□ 1.35
PHF1-208ENST00000486845 COG5Q9UP83 839 aa23.5■■□□□ 1.35
PHF1-208ENST00000486845 EPOPA6NHQ4 379 aa23.49■■□□□ 1.35
PHF1-208ENST00000486845 ARIH2O95376 493 aa23.49■■□□□ 1.35
PHF1-208ENST00000486845 KCNJ6P48051 423 aa23.49■■□□□ 1.35
PHF1-208ENST00000486845 CHMP4BP1P59074 171 aa23.49■■□□□ 1.35
PHF1-208ENST00000486845 NMIQ13287 307 aaPredicted RBP23.49■■□□□ 1.35
PHF1-208ENST00000486845 PTGISQ16647 500 aa23.49■■□□□ 1.35
PHF1-208ENST00000486845 CCDC62Q6P9F0 684 aa23.49■■□□□ 1.35
PHF1-208ENST00000486845 ZNF589Q86UQ0 364 aaPredicted RBP23.49■■□□□ 1.35
PHF1-208ENST00000486845 AFAP1L1Q8TED9 768 aa23.49■■□□□ 1.35
PHF1-208ENST00000486845 ESR2Q92731 530 aa23.49■■□□□ 1.35
PHF1-208ENST00000486845 CCDC171Q6TFL3 1326 aa23.49■■□□□ 1.35
PHF1-208ENST00000486845 GH1P01241 217 aa23.48■■□□□ 1.35
PHF1-208ENST00000486845 KCNQ1P51787 676 aa23.48■■□□□ 1.35
PHF1-208ENST00000486845 SESTD1Q86VW0 696 aa23.48■■□□□ 1.35
PHF1-208ENST00000486845 TBC1D10CQ8IV04 446 aa23.48■■□□□ 1.35
PHF1-208ENST00000486845 AFG1LQ8WV93 481 aa23.48■■□□□ 1.35
PHF1-208ENST00000486845 C1QTNF1Q9BXJ1 281 aa23.48■■□□□ 1.35
PHF1-208ENST00000486845 RAPGEFL1Q9UHV5 662 aa23.48■■□□□ 1.35
PHF1-208ENST00000486845 TET1Q8NFU7 2136 aa23.48■■□□□ 1.35
PHF1-208ENST00000486845 TLL1O43897 1013 aa23.47■■□□□ 1.35
PHF1-208ENST00000486845 MMP3P08254 477 aa23.47■■□□□ 1.35
PHF1-208ENST00000486845 GOLGA8HP0CJ92 632 aa23.47■■□□□ 1.35
PHF1-208ENST00000486845 NT5C2P49902 561 aa23.47■■□□□ 1.35
PHF1-208ENST00000486845 MFAP1P55081 439 aaKnown RBP23.47■■□□□ 1.35
PHF1-208ENST00000486845 DGKHQ86XP1 1220 aa23.47■■□□□ 1.35
PHF1-208ENST00000486845 UBA5Q9GZZ9 404 aa23.47■■□□□ 1.35
PHF1-208ENST00000486845 ABCB11O95342 1321 aa23.47■■□□□ 1.35
PHF1-208ENST00000486845 ARHGEF15O94989 841 aa23.46■■□□□ 1.35
PHF1-208ENST00000486845 PARNO95453 639 aaKnown RBP23.46■■□□□ 1.35
PHF1-208ENST00000486845 ARHGAP1Q07960 439 aa23.46■■□□□ 1.35
PHF1-208ENST00000486845 TRIP12Q14669 1992 aaPredicted RBP23.46■■□□□ 1.35
PHF1-208ENST00000486845 CDC37Q16543 378 aaPredicted RBP23.46■■□□□ 1.35
PHF1-208ENST00000486845 CCDC178Q5BJE1 867 aa23.46■■□□□ 1.35
PHF1-208ENST00000486845 SEPT14Q6ZU15 432 aa23.46■■□□□ 1.35
PHF1-208ENST00000486845 NSUN6Q8TEA1 469 aaKnown RBP23.46■■□□□ 1.35
PHF1-208ENST00000486845 XIRP2A4UGR9 3374 aa23.46■■□□□ 1.35
PHF1-208ENST00000486845 NEDD4P46934 1319 aa23.45■■□□□ 1.34
PHF1-208ENST00000486845 SELPP16109 830 aa23.45■■□□□ 1.34
PHF1-208ENST00000486845 CASTP20810 708 aaKnown RBP23.45■■□□□ 1.34
PHF1-208ENST00000486845 STXBP2Q15833 593 aa23.45■■□□□ 1.34
PHF1-208ENST00000486845 LY6KQ17RY6 165 aa23.45■■□□□ 1.34
PHF1-208ENST00000486845 KRT40Q6A162 431 aa23.45■■□□□ 1.34
PHF1-208ENST00000486845 GDF6Q6KF10 455 aaPredicted RBP23.45■■□□□ 1.34
PHF1-208ENST00000486845 MCF2L2Q86YR7 1114 aa23.45■■□□□ 1.34
PHF1-208ENST00000486845 SYTL5Q8TDW5 730 aaPredicted RBP23.45■■□□□ 1.34
PHF1-208ENST00000486845 IWS1Q96ST2 819 aa23.45■■□□□ 1.34
PHF1-208ENST00000486845 ZKSCAN3Q9BRR0 538 aa23.45■■□□□ 1.34
PHF1-208ENST00000486845 CPVLQ9H3G5 476 aa23.45■■□□□ 1.34
PHF1-208ENST00000486845 PTPRSQ13332 1948 aa23.44■■□□□ 1.34
PHF1-208ENST00000486845 KIAA1217Q5T5P2 1943 aa23.44■■□□□ 1.34
PHF1-208ENST00000486845 TRIM6-TRIM34B2RNG4 842 aa23.44■■□□□ 1.34
PHF1-208ENST00000486845 WDR5P61964 334 aaKnown RBP23.44■■□□□ 1.34
PHF1-208ENST00000486845 RBL2Q08999 1139 aa23.44■■□□□ 1.34
PHF1-208ENST00000486845 GRB10Q13322 594 aa23.44■■□□□ 1.34
PHF1-208ENST00000486845 LRRC8DQ7L1W4 858 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms