RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 TSPY8P0CW00 308 aa10.3□□□□□ -0.76
COL12A1-208ENST00000486533 FCER1AP12319 257 aa10.3□□□□□ -0.76
COL12A1-208ENST00000486533 GSDMDP57764 484 aa10.3□□□□□ -0.76
COL12A1-208ENST00000486533 FAM160A1Q05DH4 1040 aa10.3□□□□□ -0.76
COL12A1-208ENST00000486533 KLRC3Q07444 240 aa10.3□□□□□ -0.76
COL12A1-208ENST00000486533 PPARAQ07869 468 aa10.3□□□□□ -0.76
COL12A1-208ENST00000486533 TPRNQ4KMQ1 711 aa10.3□□□□□ -0.76
COL12A1-208ENST00000486533 CPLX2Q6PUV4 134 aaKnown RBP10.3□□□□□ -0.76
COL12A1-208ENST00000486533 PLA2G4DQ86XP0 818 aa10.3□□□□□ -0.76
COL12A1-208ENST00000486533 PLPP6Q8IY26 295 aa10.3□□□□□ -0.76
COL12A1-208ENST00000486533 C7orf61Q8IZ16 206 aa10.3□□□□□ -0.76
COL12A1-208ENST00000486533 NSUN7Q8NE18 718 aaKnown RBP10.3□□□□□ -0.76
COL12A1-208ENST00000486533 KCNG4Q8TDN1 519 aa10.3□□□□□ -0.76
COL12A1-208ENST00000486533 CEP95Q96GE4 821 aa10.3□□□□□ -0.76
COL12A1-208ENST00000486533 SLC5A4Q9NY91 659 aa10.3□□□□□ -0.76
COL12A1-208ENST00000486533 NYAP2Q9P242 653 aa10.3□□□□□ -0.76
COL12A1-208ENST00000486533 A0A1W2PQ27 194 aa10.29□□□□□ -0.76
COL12A1-208ENST00000486533 A0A1W2PQ64 194 aa10.29□□□□□ -0.76
COL12A1-208ENST00000486533 A0A1W2PQD8 194 aa10.29□□□□□ -0.76
COL12A1-208ENST00000486533 COBLO75128 1261 aa10.29□□□□□ -0.76
COL12A1-208ENST00000486533 NDUFB10O96000 172 aa10.29□□□□□ -0.76
COL12A1-208ENST00000486533 STAT3P40763 770 aa10.29□□□□□ -0.76
COL12A1-208ENST00000486533 DSG2Q14126 1118 aa10.29□□□□□ -0.76
COL12A1-208ENST00000486533 FAM47AQ5JRC9 791 aa10.29□□□□□ -0.76
COL12A1-208ENST00000486533 RALYLQ86SE5 291 aaKnown RBP10.29□□□□□ -0.76
COL12A1-208ENST00000486533 ABRAQ8N0Z2 381 aa10.29□□□□□ -0.76
COL12A1-208ENST00000486533 PDCL2Q8N4E4 241 aa10.29□□□□□ -0.76
COL12A1-208ENST00000486533 MMP19Q99542 508 aa10.29□□□□□ -0.76
COL12A1-208ENST00000486533 SLF1Q9BQI6 1058 aa10.29□□□□□ -0.76
COL12A1-208ENST00000486533 CCDC94Q9BW85 323 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-208ENST00000486533 DDX20Q9UHI6 824 aaKnown RBP10.29□□□□□ -0.76
COL12A1-208ENST00000486533 ADAMTS5Q9UNA0 930 aa10.29□□□□□ -0.76
COL12A1-208ENST00000486533 ZNFX1Q9P2E3 1918 aaKnown RBP10.28□□□□□ -0.76
COL12A1-208ENST00000486533 PFASO15067 1338 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 IGKV6D-41A0A0C4DH26 115 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 SMTNL1A8MU46 457 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 CCP110O43303 1012 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 MSCO60682 206 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 YEATS4O95619 227 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 TTLL1O95922 423 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 FXR1P51114 621 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL12A1-208ENST00000486533 EVCP57679 992 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 RBM10P98175 930 aaKnown RBP10.28□□□□□ -0.76
COL12A1-208ENST00000486533 TFAP4Q01664 338 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 EXOSC10Q01780 885 aaKnown RBP10.28□□□□□ -0.76
COL12A1-208ENST00000486533 SCRN1Q12765 414 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 KCTD2Q14681 263 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 CAMK4Q16566 473 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 OLFML2BQ68BL8 750 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 RIOX2Q8IUF8 465 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 CKAP2LQ8IYA6 745 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 LRRC47Q8N1G4 583 aaKnown RBP10.28□□□□□ -0.76
COL12A1-208ENST00000486533 SPC24Q8NBT2 197 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 MRPS27Q92552 414 aaKnown RBP10.28□□□□□ -0.76
COL12A1-208ENST00000486533 MTMR4Q9NYA4 1195 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 TFIP11Q9UBB9 837 aaKnown RBP10.28□□□□□ -0.76
COL12A1-208ENST00000486533 CTDP1Q9Y5B0 961 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-208ENST00000486533 PLIN4Q96Q06 1357 aa10.28□□□□□ -0.76
COL12A1-208ENST00000486533 E7EWF7 191 aa10.27□□□□□ -0.76
COL12A1-208ENST00000486533 JAK2O60674 1132 aa10.27□□□□□ -0.76
COL12A1-208ENST00000486533 PGK2P07205 417 aa10.27□□□□□ -0.76
COL12A1-208ENST00000486533 CYBAP13498 195 aa10.27□□□□□ -0.76
COL12A1-208ENST00000486533 CTDSPL2Q05D32 466 aa10.27□□□□□ -0.76
COL12A1-208ENST00000486533 TRDNQ13061 729 aa10.27□□□□□ -0.76
COL12A1-208ENST00000486533 SF3A1Q15459 793 aaKnown RBP10.27□□□□□ -0.76
COL12A1-208ENST00000486533 ANO1Q5XXA6 986 aa10.27□□□□□ -0.76
COL12A1-208ENST00000486533 SNRNP48Q6IEG0 339 aaKnown RBP10.27□□□□□ -0.76
COL12A1-208ENST00000486533 LUZP1Q86V48 1076 aa10.27□□□□□ -0.76
COL12A1-208ENST00000486533 SMAP1Q8IYB5 467 aaPredicted RBP10.27□□□□□ -0.76
COL12A1-208ENST00000486533 PRPF38AQ8NAV1 312 aaKnown RBP10.27□□□□□ -0.76
COL12A1-208ENST00000486533 TRPV1Q8NER1 839 aa10.27□□□□□ -0.76
COL12A1-208ENST00000486533 NEDD1Q8NHV4 660 aa10.27□□□□□ -0.76
COL12A1-208ENST00000486533 KIFC2Q96AC6 838 aa10.27□□□□□ -0.76
COL12A1-208ENST00000486533 TCEANC2Q96MN5 208 aa10.27□□□□□ -0.76
COL12A1-208ENST00000486533 TEX13BQ9BXU2 312 aa10.27□□□□□ -0.76
COL12A1-208ENST00000486533 IMPACTQ9P2X3 320 aa10.27□□□□□ -0.76
COL12A1-208ENST00000486533 ZNF214Q9UL59 606 aaPredicted RBP10.27□□□□□ -0.76
COL12A1-208ENST00000486533 ZMYND8Q9ULU4 1186 aaPredicted RBP10.27□□□□□ -0.76
COL12A1-208ENST00000486533 PLXNA1Q9UIW2 1896 aa10.27□□□□□ -0.77
COL12A1-208ENST00000486533 TSPY2A6NKD2 308 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 CPLX1O14810 134 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 FOXP2O15409 715 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 RANBP6O60518 1105 aaKnown RBP10.26□□□□□ -0.77
COL12A1-208ENST00000486533 ZBED4O75132 1171 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 NR1I2O75469 434 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 HSPD1P10809 573 aaKnown RBP10.26□□□□□ -0.77
COL12A1-208ENST00000486533 COL6A1P12109 1028 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 PTGS1P23219 599 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 COPB2P35606 906 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 ME1P48163 572 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 STK38Q15208 465 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 SYNE3Q6ZMZ3 975 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 CPXCR1Q8N123 301 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 REPS2Q8NFH8 660 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 NCOA7Q8NI08 942 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 MKL1Q969V6 931 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 MAML3Q96JK9 1138 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 C8orf76Q96K31 380 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 BPIFA3Q9BQP9 254 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 TOMM22Q9NS69 142 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms