RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 PFDN2Q9UHV9 154 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 FBXL7Q9UJT9 491 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 PLA2G2DQ9UNK4 145 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 SMG5Q9UPR3 1016 aaKnown RBP8.23□□□□□ -1.09
LTN1-206ENST00000486427 IQCA1LA6NCM1 817 aa8.22□□□□□ -1.09
LTN1-206ENST00000486427 F8W031 263 aaPredicted RBP8.22□□□□□ -1.09
LTN1-206ENST00000486427 PRODHO43272 600 aa8.22□□□□□ -1.09
LTN1-206ENST00000486427 CDR1P51861 262 aa8.22□□□□□ -1.09
LTN1-206ENST00000486427 MAP4K2Q12851 820 aa8.22□□□□□ -1.09
LTN1-206ENST00000486427 IQCEQ6IPM2 695 aa8.22□□□□□ -1.09
LTN1-206ENST00000486427 TEX2Q8IWB9 1127 aa8.22□□□□□ -1.09
LTN1-206ENST00000486427 RCBTB1Q8NDN9 531 aa8.22□□□□□ -1.09
LTN1-206ENST00000486427 PMFBP1Q8TBY8 1022 aa8.22□□□□□ -1.09
LTN1-206ENST00000486427 PLEKHO2Q8TD55 490 aa8.22□□□□□ -1.09
LTN1-206ENST00000486427 OSBP2Q969R2 916 aa8.22□□□□□ -1.09
LTN1-206ENST00000486427 ZNF669Q96BR6 464 aaPredicted RBP8.22□□□□□ -1.09
LTN1-206ENST00000486427 SPATA9Q9BWV2 254 aa8.22□□□□□ -1.09
LTN1-206ENST00000486427 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.22□□□□□ -1.094e-7■■■■□ 23
LTN1-206ENST00000486427 TCAF2A6NFQ2 919 aa8.21□□□□□ -1.1
LTN1-206ENST00000486427 DIAPH1O60610 1272 aaKnown RBP8.21□□□□□ -1.1
LTN1-206ENST00000486427 TMEM62Q0P6H9 643 aa8.21□□□□□ -1.1
LTN1-206ENST00000486427 KCNAB2Q13303 367 aa8.21□□□□□ -1.1
LTN1-206ENST00000486427 MTERF2Q49AM1 385 aa8.21□□□□□ -1.1
LTN1-206ENST00000486427 OLFML2BQ68BL8 750 aa8.21□□□□□ -1.1
LTN1-206ENST00000486427 ZC3H14Q6PJT7 736 aaKnown RBP8.21□□□□□ -1.1
LTN1-206ENST00000486427 NLRP10Q86W26 655 aa8.21□□□□□ -1.1
LTN1-206ENST00000486427 LRRC47Q8N1G4 583 aaKnown RBP8.21□□□□□ -1.1
LTN1-206ENST00000486427 KCTD13Q8WZ19 329 aa8.21□□□□□ -1.1
LTN1-206ENST00000486427 SNTG2Q9NY99 539 aa8.21□□□□□ -1.1
LTN1-206ENST00000486427 TIMM13Q9Y5L4 95 aaPredicted RBP8.21□□□□□ -1.1
LTN1-206ENST00000486427 DBX1A6NMT0 343 aa8.2□□□□□ -1.1
LTN1-206ENST00000486427 NPIPB6E9PJ23 425 aa8.2□□□□□ -1.1
LTN1-206ENST00000486427 ADCY3O60266 1144 aa8.2□□□□□ -1.1
LTN1-206ENST00000486427 NTRK1P04629 796 aa8.2□□□□□ -1.1
LTN1-206ENST00000486427 FGFR1P11362 822 aa8.2□□□□□ -1.1
LTN1-206ENST00000486427 PABPC1P11940 636 aaKnown RBP8.2□□□□□ -1.1
LTN1-206ENST00000486427 FPR2P25090 351 aa8.2□□□□□ -1.1
LTN1-206ENST00000486427 LTBRP36941 435 aa8.2□□□□□ -1.1
LTN1-206ENST00000486427 NCKAP1LP55160 1127 aa8.2□□□□□ -1.1
LTN1-206ENST00000486427 PRR5P85299 388 aa8.2□□□□□ -1.1
LTN1-206ENST00000486427 WWC2Q6AWC2 1192 aa8.2□□□□□ -1.1
LTN1-206ENST00000486427 LDHDQ86WU2 507 aa8.2□□□□□ -1.1
LTN1-206ENST00000486427 USP33Q8TEY7 942 aa8.2□□□□□ -1.1
LTN1-206ENST00000486427 DEPDC7Q96QD5 511 aa8.2□□□□□ -1.1
LTN1-206ENST00000486427 NPFFR2Q9Y5X5 522 aa8.2□□□□□ -1.1
LTN1-206ENST00000486427 TRAV20A0A0B4J274 112 aa8.19□□□□□ -1.1
LTN1-206ENST00000486427 BCL6P41182 706 aa8.19□□□□□ -1.1
LTN1-206ENST00000486427 RPL11P62913 178 aaKnown RBP8.19□□□□□ -1.1
LTN1-206ENST00000486427 JAG1P78504 1218 aa8.19□□□□□ -1.1
LTN1-206ENST00000486427 ZNF200P98182 395 aaPredicted RBP8.19□□□□□ -1.1
LTN1-206ENST00000486427 SSRP1Q08945 709 aaKnown RBP8.19□□□□□ -1.1
LTN1-206ENST00000486427 NTRK3Q16288 839 aa8.19□□□□□ -1.1
LTN1-206ENST00000486427 KCNA10Q16322 511 aa8.19□□□□□ -1.1
LTN1-206ENST00000486427 CABP7Q86V35 215 aa8.19□□□□□ -1.1
LTN1-206ENST00000486427 ANKLE2Q86XL3 938 aa8.19□□□□□ -1.1
LTN1-206ENST00000486427 IGDCC3Q8IVU1 814 aa8.19□□□□□ -1.1
LTN1-206ENST00000486427 NETO2Q8NC67 525 aa8.19□□□□□ -1.1
LTN1-206ENST00000486427 MZB1Q8WU39 189 aa8.19□□□□□ -1.1
LTN1-206ENST00000486427 BCAS3Q9H6U6 928 aa8.19□□□□□ -1.1
LTN1-206ENST00000486427 SIT1Q9Y3P8 196 aa8.19□□□□□ -1.1
LTN1-206ENST00000486427 PCDHA5Q9Y5H7 936 aa8.19□□□□□ -1.1
LTN1-206ENST00000486427 ARID1BQ8NFD5 2236 aaPredicted RBP8.19□□□□□ -1.1
LTN1-206ENST00000486427 C22orf46C9J442 243 aa8.18□□□□□ -1.1
LTN1-206ENST00000486427 N4BP3O15049 544 aa8.18□□□□□ -1.1
LTN1-206ENST00000486427 FBLN1P23142 703 aa8.18□□□□□ -1.1
LTN1-206ENST00000486427 LINC00310P59036 64 aa8.18□□□□□ -1.1
LTN1-206ENST00000486427 SSPNQ14714 243 aa8.18□□□□□ -1.1
LTN1-206ENST00000486427 NSMFQ6X4W1 530 aa8.18□□□□□ -1.1
LTN1-206ENST00000486427 USP53Q70EK8 1073 aa8.18□□□□□ -1.1
LTN1-206ENST00000486427 DBR1Q9UK59 544 aaKnown RBP8.18□□□□□ -1.1
LTN1-206ENST00000486427 PCDHA2Q9Y5H9 948 aa8.18□□□□□ -1.1
LTN1-206ENST00000486427 BLACEA4D250 179 aa8.17□□□□□ -1.1
LTN1-206ENST00000486427 MSCO60682 206 aa8.17□□□□□ -1.1
LTN1-206ENST00000486427 CFPP27918 469 aa8.17□□□□□ -1.1
LTN1-206ENST00000486427 FOXB2Q5VYV0 432 aa8.17□□□□□ -1.1
LTN1-206ENST00000486427 CEP68Q76N32 757 aa8.17□□□□□ -1.1
LTN1-206ENST00000486427 LRP10Q7Z4F1 713 aa8.17□□□□□ -1.1
LTN1-206ENST00000486427 C1QL4Q86Z23 238 aa8.17□□□□□ -1.1
LTN1-206ENST00000486427 Q8N1Y9 231 aa8.17□□□□□ -1.1
LTN1-206ENST00000486427 SRPK1Q96SB4 655 aaKnown RBP8.17□□□□□ -1.1
LTN1-206ENST00000486427 IRS4O14654 1257 aaPredicted RBP8.16□□□□□ -1.1
LTN1-206ENST00000486427 MYO1BO43795 1136 aa8.16□□□□□ -1.1
LTN1-206ENST00000486427 FAM153BP0C7A2 387 aa8.16□□□□□ -1.1
LTN1-206ENST00000486427 SOGA3Q5TF21 947 aa8.16□□□□□ -1.1
LTN1-206ENST00000486427 KCNT2Q6UVM3 1135 aa8.16□□□□□ -1.1
LTN1-206ENST00000486427 PHF20Q9BVI0 1012 aa8.16□□□□□ -1.1
LTN1-206ENST00000486427 IRS2Q9Y4H2 1338 aa8.16□□□□□ -1.1
LTN1-206ENST00000486427 X6R8D5 127 aa8.16□□□□□ -1.1
LTN1-206ENST00000486427 KDM2BQ8NHM5 1336 aa8.15□□□□□ -1.1
LTN1-206ENST00000486427 GTF2A2P52657 109 aa8.15□□□□□ -1.1
LTN1-206ENST00000486427 LSAMPQ13449 338 aa8.15□□□□□ -1.1
LTN1-206ENST00000486427 TMEFF1Q8IYR6 380 aa8.15□□□□□ -1.1
LTN1-206ENST00000486427 ZBTB38Q8NAP3 1195 aaPredicted RBP8.15□□□□□ -1.1
LTN1-206ENST00000486427 PANK1Q8TE04 598 aa8.15□□□□□ -1.1
LTN1-206ENST00000486427 MKL1Q969V6 931 aa8.15□□□□□ -1.1
LTN1-206ENST00000486427 TSPAN17Q96FV3 270 aa8.15□□□□□ -1.1
LTN1-206ENST00000486427 TRMT2BQ96GJ1 504 aaKnown RBP8.15□□□□□ -1.1
LTN1-206ENST00000486427 PEX11GQ96HA9 241 aa8.15□□□□□ -1.1
LTN1-206ENST00000486427 SIGLEC10Q96LC7 697 aa8.15□□□□□ -1.1
LTN1-206ENST00000486427 DRC1Q96MC2 740 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms