RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 RRP36Q96EU6 259 aaKnown RBP14.93□□□□□ -0.02
CHMP3-208ENST00000486404 NEK1Q96PY6 1258 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 MAP3K14Q99558 947 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 LZTS2Q9BRK4 669 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 LRRC2Q9BYS8 371 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 RIOX1Q9H6W3 641 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 PCDH10Q9P2E7 1040 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 Q9Y3F1 56 aa14.93□□□□□ -0.02
CHMP3-208ENST00000486404 MYH7BA7E2Y1 1941 aa14.92□□□□□ -0.02
CHMP3-208ENST00000486404 PNMA6FA0A0J9YX94 578 aa14.92□□□□□ -0.02
CHMP3-208ENST00000486404 NKRFO15226 690 aaKnown RBP eCLIP14.92□□□□□ -0.02
CHMP3-208ENST00000486404 PPP1R11O60927 126 aaPredicted RBP14.92□□□□□ -0.02
CHMP3-208ENST00000486404 CABYRO75952 493 aa14.92□□□□□ -0.02
CHMP3-208ENST00000486404 REC8O95072 547 aa14.92□□□□□ -0.02
CHMP3-208ENST00000486404 EIF2AK2P19525 551 aaKnown RBP14.92□□□□□ -0.02
CHMP3-208ENST00000486404 LIFRP42702 1097 aa14.92□□□□□ -0.02
CHMP3-208ENST00000486404 CPT1AP50416 773 aa14.92□□□□□ -0.02
CHMP3-208ENST00000486404 IRX5P78411 483 aaPredicted RBP14.92□□□□□ -0.02
CHMP3-208ENST00000486404 FGD1P98174 961 aa14.92□□□□□ -0.02
CHMP3-208ENST00000486404 TTLL4Q14679 1199 aa14.92□□□□□ -0.02
CHMP3-208ENST00000486404 TDHQ8IZJ6 230 aa14.92□□□□□ -0.02
CHMP3-208ENST00000486404 SPZ1Q9BXG8 430 aa14.92□□□□□ -0.02
CHMP3-208ENST00000486404 PPP4R2Q9NY27 417 aa14.92□□□□□ -0.02
CHMP3-208ENST00000486404 COL20A1Q9P218 1284 aa14.92□□□□□ -0.02
CHMP3-208ENST00000486404 RANBP2P49792 3224 aaKnown RBP14.91□□□□□ -0.02
CHMP3-208ENST00000486404 GCOM1H8Y6P7 765 aaPredicted RBP14.91□□□□□ -0.02
CHMP3-208ENST00000486404 TLR3O15455 904 aaKnown RBP14.91□□□□□ -0.02
CHMP3-208ENST00000486404 POLR2MP0CAP2 368 aa14.91□□□□□ -0.02
CHMP3-208ENST00000486404 RXRAP19793 462 aa14.91□□□□□ -0.02
CHMP3-208ENST00000486404 PTGS1P23219 599 aa14.91□□□□□ -0.02
CHMP3-208ENST00000486404 HOXA13P31271 388 aaPredicted RBP14.91□□□□□ -0.02
CHMP3-208ENST00000486404 HSD17B4P51659 736 aa14.91□□□□□ -0.02
CHMP3-208ENST00000486404 STXBP2Q15833 593 aa14.91□□□□□ -0.02
CHMP3-208ENST00000486404 CXCL17Q6UXB2 119 aa14.91□□□□□ -0.02
CHMP3-208ENST00000486404 RAB11FIP4Q86YS3 637 aa14.91□□□□□ -0.02
CHMP3-208ENST00000486404 TBC1D5Q92609 795 aa14.91□□□□□ -0.02
CHMP3-208ENST00000486404 TAAR1Q96RJ0 339 aa14.91□□□□□ -0.02
CHMP3-208ENST00000486404 IWS1Q96ST2 819 aa14.91□□□□□ -0.02
CHMP3-208ENST00000486404 TMEM39AQ9NV64 488 aa14.91□□□□□ -0.02
CHMP3-208ENST00000486404 RBM47A0AV96 593 aaKnown RBP14.9□□□□□ -0.02
CHMP3-208ENST00000486404 CTAGE5O15320 804 aa14.9□□□□□ -0.02
CHMP3-208ENST00000486404 CYTH3O43739 400 aa14.9□□□□□ -0.02
CHMP3-208ENST00000486404 PLEKHA8P1O95397 391 aa14.9□□□□□ -0.02
CHMP3-208ENST00000486404 HMGB1P09429 215 aaKnown RBP14.9□□□□□ -0.02
CHMP3-208ENST00000486404 TXNP10599 105 aaKnown RBP14.9□□□□□ -0.02
CHMP3-208ENST00000486404 RAG1P15918 1043 aa14.9□□□□□ -0.02
CHMP3-208ENST00000486404 NKX3-2P78367 333 aa14.9□□□□□ -0.02
CHMP3-208ENST00000486404 SLC35G1Q2M3R5 365 aa14.9□□□□□ -0.02
CHMP3-208ENST00000486404 SEPT14Q6ZU15 432 aa14.9□□□□□ -0.02
CHMP3-208ENST00000486404 ANKRD33Q7Z3H0 272 aa14.9□□□□□ -0.02
CHMP3-208ENST00000486404 SAMD3Q8N6K7 520 aa14.9□□□□□ -0.02
CHMP3-208ENST00000486404 CUL5Q93034 780 aa14.9□□□□□ -0.02
CHMP3-208ENST00000486404 TOX2Q96NM4 488 aa14.9□□□□□ -0.02
CHMP3-208ENST00000486404 PXMP2Q9NR77 195 aa14.9□□□□□ -0.02
CHMP3-208ENST00000486404 POLR3EQ9NVU0 708 aa14.9□□□□□ -0.02
CHMP3-208ENST00000486404 MAP3K20Q9NYL2 800 aaKnown RBP14.9□□□□□ -0.02
CHMP3-208ENST00000486404 NAP1L2Q9ULW6 460 aaPredicted RBP14.9□□□□□ -0.02
CHMP3-208ENST00000486404 ARVCFO00192 962 aa14.89□□□□□ -0.03
CHMP3-208ENST00000486404 OPLAHO14841 1288 aa14.89□□□□□ -0.03
CHMP3-208ENST00000486404 MYL3P08590 195 aa14.89□□□□□ -0.03
CHMP3-208ENST00000486404 MYCLP12524 364 aaPredicted RBP14.89□□□□□ -0.03
CHMP3-208ENST00000486404 GHRHRQ02643 423 aa14.89□□□□□ -0.03
CHMP3-208ENST00000486404 TMEM63BQ5T3F8 832 aa14.89□□□□□ -0.03
CHMP3-208ENST00000486404 ERICH6BQ5W0A0 696 aa14.89□□□□□ -0.03
CHMP3-208ENST00000486404 DHX32Q7L7V1 743 aaKnown RBP14.89□□□□□ -0.03
CHMP3-208ENST00000486404 SH3RF1Q7Z6J0 888 aa14.89□□□□□ -0.03
CHMP3-208ENST00000486404 SGMS1Q86VZ5 419 aa14.89□□□□□ -0.03
CHMP3-208ENST00000486404 FCHSD1Q86WN1 690 aa14.89□□□□□ -0.03
CHMP3-208ENST00000486404 RASEFQ8IZ41 740 aa14.89□□□□□ -0.03
CHMP3-208ENST00000486404 BADQ92934 168 aa14.89□□□□□ -0.03
CHMP3-208ENST00000486404 TCEANC2Q96MN5 208 aa14.89□□□□□ -0.03
CHMP3-208ENST00000486404 MRVI1Q9Y6F6 885 aa14.89□□□□□ -0.03
CHMP3-208ENST00000486404 SCN10AQ9Y5Y9 1956 aa14.89□□□□□ -0.03
CHMP3-208ENST00000486404 TRIM43BA6NCK2 446 aa14.88□□□□□ -0.03
CHMP3-208ENST00000486404 KIAA0355O15063 1070 aa14.88□□□□□ -0.03
CHMP3-208ENST00000486404 NR3C2P08235 984 aa14.88□□□□□ -0.03
CHMP3-208ENST00000486404 SMARCA1P28370 1054 aa14.88□□□□□ -0.03
CHMP3-208ENST00000486404 CCND2P30279 289 aa14.88□□□□□ -0.03
CHMP3-208ENST00000486404 COL9A3Q14050 684 aaPredicted RBP14.88□□□□□ -0.03
CHMP3-208ENST00000486404 ADCK5Q3MIX3 580 aa14.88□□□□□ -0.03
CHMP3-208ENST00000486404 APOA5Q6Q788 366 aa14.88□□□□□ -0.03
CHMP3-208ENST00000486404 TMTC3Q6ZXV5 915 aa14.88□□□□□ -0.03
CHMP3-208ENST00000486404 SMARCC2Q8TAQ2 1214 aa14.88□□□□□ -0.03
CHMP3-208ENST00000486404 TRIM43Q96BQ3 446 aaPredicted RBP14.88□□□□□ -0.03
CHMP3-208ENST00000486404 JAKMIP1Q96N16 626 aaKnown RBP14.88□□□□□ -0.03
CHMP3-208ENST00000486404 RBM28Q9NW13 759 aaKnown RBP14.88□□□□□ -0.03
CHMP3-208ENST00000486404 DOCK5Q9H7D0 1870 aa14.88□□□□□ -0.03
CHMP3-208ENST00000486404 TANC1Q9C0D5 1861 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 KLF18A0A0U1RQI7 1052 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 GOLGA8AA7E2F4 631 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 GOLGA8BA8MQT2 603 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 ZBTB43O43298 467 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 EIF3JO75822 258 aaKnown RBP14.87□□□□□ -0.03
CHMP3-208ENST00000486404 GH1P01241 217 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 FPGSQ05932 587 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 C1QBPQ07021 282 aaKnown RBP14.87□□□□□ -0.03
CHMP3-208ENST00000486404 FAAP100Q0VG06 881 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 ITGA7Q13683 1181 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 RTN1Q16799 776 aa14.87□□□□□ -0.03
CHMP3-208ENST00000486404 TSGA10IPQ3SY00 556 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms