RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 RNF20Q5VTR2 975 aa25.51■■□□□ 1.67
HLA-F-228ENST00000486194 ARHGEF16Q5VV41 709 aa25.51■■□□□ 1.67
HLA-F-228ENST00000486194 HOMER1Q86YM7 354 aa25.51■■□□□ 1.67
HLA-F-228ENST00000486194 TMEM87BQ96K49 555 aa25.51■■□□□ 1.67
HLA-F-228ENST00000486194 SENP2Q9HC62 589 aa25.51■■□□□ 1.67
HLA-F-228ENST00000486194 GPHNQ9NQX3 736 aaPredicted RBP25.51■■□□□ 1.67
HLA-F-228ENST00000486194 PRC1O43663 620 aa25.5■■□□□ 1.67
HLA-F-228ENST00000486194 KPNA6O60684 536 aa25.5■■□□□ 1.67
HLA-F-228ENST00000486194 DDAH1O94760 285 aa25.5■■□□□ 1.67
HLA-F-228ENST00000486194 TXNP10599 105 aaKnown RBP25.5■■□□□ 1.67
HLA-F-228ENST00000486194 KIF5BP33176 963 aa25.5■■□□□ 1.67
HLA-F-228ENST00000486194 HSD17B4P51659 736 aa25.5■■□□□ 1.67
HLA-F-228ENST00000486194 GHRHRQ02643 423 aa25.5■■□□□ 1.67
HLA-F-228ENST00000486194 NECTIN1Q15223 517 aa25.5■■□□□ 1.67
HLA-F-228ENST00000486194 SHHQ15465 462 aa25.5■■□□□ 1.67
HLA-F-228ENST00000486194 CTCFLQ8NI51 663 aaPredicted RBP25.5■■□□□ 1.67
HLA-F-228ENST00000486194 COL20A1Q9P218 1284 aa25.5■■□□□ 1.67
HLA-F-228ENST00000486194 PNMA6FA0A0J9YX94 578 aa25.49■■□□□ 1.67
HLA-F-228ENST00000486194 PTGS1P23219 599 aa25.49■■□□□ 1.67
HLA-F-228ENST00000486194 CREB3L3Q68CJ9 461 aa25.49■■□□□ 1.67
HLA-F-228ENST00000486194 ZNF654Q8IZM8 581 aa25.49■■□□□ 1.67
HLA-F-228ENST00000486194 PIGSQ96S52 555 aa25.49■■□□□ 1.67
HLA-F-228ENST00000486194 LY9Q9HBG7 655 aa25.49■■□□□ 1.67
HLA-F-228ENST00000486194 PPP1R11O60927 126 aaPredicted RBP25.48■■□□□ 1.67
HLA-F-228ENST00000486194 CD4P01730 458 aa25.48■■□□□ 1.67
HLA-F-228ENST00000486194 MFSD5Q6N075 450 aa25.48■■□□□ 1.67
HLA-F-228ENST00000486194 NFXL1Q6ZNB6 911 aa25.48■■□□□ 1.67
HLA-F-228ENST00000486194 DEFB123Q8N688 67 aa25.48■■□□□ 1.67
HLA-F-228ENST00000486194 CCDC136Q96JN2 1154 aa25.48■■□□□ 1.67
HLA-F-228ENST00000486194 LZTS2Q9BRK4 669 aa25.48■■□□□ 1.67
HLA-F-228ENST00000486194 CCDC69A6NI79 296 aa25.47■■□□□ 1.67
HLA-F-228ENST00000486194 EIF3JO75822 258 aaKnown RBP25.47■■□□□ 1.67
HLA-F-228ENST00000486194 GNAQP50148 359 aa25.47■■□□□ 1.67
HLA-F-228ENST00000486194 PURAQ00577 322 aaKnown RBP25.47■■□□□ 1.67
HLA-F-228ENST00000486194 C9orf50Q5SZB4 431 aa25.47■■□□□ 1.67
HLA-F-228ENST00000486194 TMEM199Q8N511 208 aa25.47■■□□□ 1.67
HLA-F-228ENST00000486194 MTG1Q9BT17 334 aaPredicted RBP25.47■■□□□ 1.67
HLA-F-228ENST00000486194 PXMP2Q9NR77 195 aa25.47■■□□□ 1.67
HLA-F-228ENST00000486194 MYH6P13533 1939 aa25.47■■□□□ 1.67
HLA-F-228ENST00000486194 A6NJR5 290 aa25.46■■□□□ 1.67
HLA-F-228ENST00000486194 OPLAHO14841 1288 aa25.46■■□□□ 1.67
HLA-F-228ENST00000486194 CYTH3O43739 400 aa25.46■■□□□ 1.67
HLA-F-228ENST00000486194 CDC45O75419 566 aa25.46■■□□□ 1.67
HLA-F-228ENST00000486194 NR3C2P08235 984 aa25.46■■□□□ 1.67
HLA-F-228ENST00000486194 MYL3P08590 195 aa25.46■■□□□ 1.67
HLA-F-228ENST00000486194 CALM1P0DP23 149 aa25.46■■□□□ 1.67
HLA-F-228ENST00000486194 CALM2P0DP24 149 aa25.46■■□□□ 1.67
HLA-F-228ENST00000486194 CALM3P0DP25 149 aa25.46■■□□□ 1.67
HLA-F-228ENST00000486194 EIF2AK2P19525 551 aaKnown RBP25.46■■□□□ 1.67
HLA-F-228ENST00000486194 SMARCA1P28370 1054 aa25.46■■□□□ 1.67
HLA-F-228ENST00000486194 LIFRP42702 1097 aa25.46■■□□□ 1.67
HLA-F-228ENST00000486194 PPIGQ13427 754 aaKnown RBP eCLIP25.46■■□□□ 1.67
HLA-F-228ENST00000486194 SEPT14Q6ZU15 432 aa25.46■■□□□ 1.67
HLA-F-228ENST00000486194 GRIN2DO15399 1336 aa25.45■■□□□ 1.66
HLA-F-228ENST00000486194 GCOM1H8Y6P7 765 aaPredicted RBP25.45■■□□□ 1.66
HLA-F-228ENST00000486194 SH2B2O14492 632 aaPredicted RBP25.45■■□□□ 1.66
HLA-F-228ENST00000486194 POLR2MP0CAP2 368 aa25.45■■□□□ 1.66
HLA-F-228ENST00000486194 PSMC6P62333 389 aa25.45■■□□□ 1.66
HLA-F-228ENST00000486194 SLC35G1Q2M3R5 365 aa25.45■■□□□ 1.66
HLA-F-228ENST00000486194 FAM109BQ6ICB4 259 aaPredicted RBP25.45■■□□□ 1.66
HLA-F-228ENST00000486194 CCDC62Q6P9F0 684 aa25.45■■□□□ 1.66
HLA-F-228ENST00000486194 RNPC3Q96LT9 517 aaKnown RBP25.45■■□□□ 1.66
HLA-F-228ENST00000486194 SPZ1Q9BXG8 430 aa25.45■■□□□ 1.66
HLA-F-228ENST00000486194 GH1P01241 217 aa25.44■■□□□ 1.66
HLA-F-228ENST00000486194 SUPT20HL2P0C7V6 817 aa25.44■■□□□ 1.66
HLA-F-228ENST00000486194 SKAP1Q86WV1 359 aa25.44■■□□□ 1.66
HLA-F-228ENST00000486194 RRP36Q96EU6 259 aaKnown RBP25.44■■□□□ 1.66
HLA-F-228ENST00000486194 LAMA3Q16787 3333 aa25.43■■□□□ 1.66
HLA-F-228ENST00000486194 ARIH2O95376 493 aa25.43■■□□□ 1.66
HLA-F-228ENST00000486194 COPS5Q92905 334 aa25.43■■□□□ 1.66
HLA-F-228ENST00000486194 PDCD2LQ9BRP1 358 aa25.43■■□□□ 1.66
HLA-F-228ENST00000486194 PPP1R12CQ9BZL4 782 aa25.43■■□□□ 1.66
HLA-F-228ENST00000486194 HIPK3Q9H422 1215 aa25.43■■□□□ 1.66
HLA-F-228ENST00000486194 SEC63Q9UGP8 760 aaKnown RBP25.43■■□□□ 1.66
HLA-F-228ENST00000486194 HOXA13P31271 388 aaPredicted RBP25.42■■□□□ 1.66
HLA-F-228ENST00000486194 EPHB4P54760 987 aa25.42■■□□□ 1.66
HLA-F-228ENST00000486194 SMAD3P84022 425 aaKnown RBP25.42■■□□□ 1.66
HLA-F-228ENST00000486194 KCNV1Q6PIU1 500 aa25.42■■□□□ 1.66
HLA-F-228ENST00000486194 MYL10Q9BUA6 226 aa25.42■■□□□ 1.66
HLA-F-228ENST00000486194 ALDH8A1Q9H2A2 487 aaPredicted RBP25.42■■□□□ 1.66
HLA-F-228ENST00000486194 SLC12A7Q9Y666 1083 aa25.42■■□□□ 1.66
HLA-F-228ENST00000486194 MRVI1Q9Y6F6 885 aa25.42■■□□□ 1.66
HLA-F-228ENST00000486194 B4GALT4O60513 344 aa25.41■■□□□ 1.66
HLA-F-228ENST00000486194 LY6KQ17RY6 165 aa25.41■■□□□ 1.66
HLA-F-228ENST00000486194 NEK1Q96PY6 1258 aa25.41■■□□□ 1.66
HLA-F-228ENST00000486194 TRPV6Q9H1D0 765 aa25.41■■□□□ 1.66
HLA-F-228ENST00000486194 MYCLP12524 364 aaPredicted RBP25.4■■□□□ 1.66
HLA-F-228ENST00000486194 PTPN11Q06124 597 aaPredicted RBP25.4■■□□□ 1.66
HLA-F-228ENST00000486194 KRT32Q14532 448 aa25.4■■□□□ 1.66
HLA-F-228ENST00000486194 PGM5Q15124 567 aa25.4■■□□□ 1.66
HLA-F-228ENST00000486194 NFRKBQ6P4R8 1299 aa25.4■■□□□ 1.66
HLA-F-228ENST00000486194 PSRC1Q6PGN9 363 aaPredicted RBP25.4■■□□□ 1.66
HLA-F-228ENST00000486194 SYNE3Q6ZMZ3 975 aa25.4■■□□□ 1.66
HLA-F-228ENST00000486194 Q7L0L9 218 aa25.4■■□□□ 1.66
HLA-F-228ENST00000486194 PIBF1Q8WXW3 757 aa25.4■■□□□ 1.66
HLA-F-228ENST00000486194 MTMR10Q9NXD2 777 aa25.4■■□□□ 1.66
HLA-F-228ENST00000486194 DDX41Q9UJV9 622 aaKnown RBP25.4■■□□□ 1.66
HLA-F-228ENST00000486194 SZT2Q5T011 3432 aa25.4■■□□□ 1.66
HLA-F-228ENST00000486194 NEFLP07196 543 aa25.39■■□□□ 1.66
HLA-F-228ENST00000486194 CSF2RAP15509 400 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms