RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 SLC39A2Q9NP94 309 aa25.02■■□□□ 1.6
CLN5-202ENST00000485938 STX8Q9UNK0 236 aa25.02■■□□□ 1.6
CLN5-202ENST00000485938 MOCS3O95396 460 aa25.01■■□□□ 1.59
CLN5-202ENST00000485938 EIF4A3P38919 411 aaKnown RBP25.01■■□□□ 1.59
CLN5-202ENST00000485938 NEK8Q86SG6 692 aa25.01■■□□□ 1.59
CLN5-202ENST00000485938 ZNF444Q8N0Y2 327 aaPredicted RBP25.01■■□□□ 1.59
CLN5-202ENST00000485938 SPATA4Q8NEY3 305 aa25.01■■□□□ 1.59
CLN5-202ENST00000485938 CPVLQ9H3G5 476 aa25.01■■□□□ 1.59
CLN5-202ENST00000485938 FAM207AQ9NSI2 230 aaPredicted RBP25.01■■□□□ 1.59
CLN5-202ENST00000485938 MAGEA9P43362 315 aa25.01■■□□□ 1.59
CLN5-202ENST00000485938 FAM76AQ8TAV0 307 aa25.01■■□□□ 1.59
CLN5-202ENST00000485938 DRC1Q96MC2 740 aa25.01■■□□□ 1.59
CLN5-202ENST00000485938 OSBPL9Q96SU4 736 aa25.01■■□□□ 1.59
CLN5-202ENST00000485938 HINFPQ9BQA5 517 aa25.01■■□□□ 1.59
CLN5-202ENST00000485938 DMGDHQ9UI17 866 aaKnown RBP25.01■■□□□ 1.59
CLN5-202ENST00000485938 IRS2Q9Y4H2 1338 aa25■■□□□ 1.59
CLN5-202ENST00000485938 SMCO2A6NFE2 343 aa25■■□□□ 1.59
CLN5-202ENST00000485938 CORO7P57737 925 aa25■■□□□ 1.59
CLN5-202ENST00000485938 TBC1D9BQ66K14 1250 aa25■■□□□ 1.59
CLN5-202ENST00000485938 CALML4Q96GE6 196 aa25■■□□□ 1.59
CLN5-202ENST00000485938 C6orf50Q9HD87 102 aa25■■□□□ 1.59
CLN5-202ENST00000485938 MYH10P35580 1976 aa24.99■■□□□ 1.59
CLN5-202ENST00000485938 GOLGA6CA6NDK9 693 aa24.99■■□□□ 1.59
CLN5-202ENST00000485938 GOLGA6DP0CG33 693 aa24.99■■□□□ 1.59
CLN5-202ENST00000485938 RASA1P20936 1047 aa24.99■■□□□ 1.59
CLN5-202ENST00000485938 MAN2A1Q16706 1144 aa24.99■■□□□ 1.59
CLN5-202ENST00000485938 SND1Q7KZF4 910 aaKnown RBP eCLIP24.99■■□□□ 1.59
CLN5-202ENST00000485938 BLOC1S4Q9NUP1 217 aa24.99■■□□□ 1.59
CLN5-202ENST00000485938 GOLGA6AQ9NYA3 693 aa24.99■■□□□ 1.59
CLN5-202ENST00000485938 ABCB11O95342 1321 aa24.99■■□□□ 1.59
CLN5-202ENST00000485938 TCP1P17987 556 aaKnown RBP24.98■■□□□ 1.59
CLN5-202ENST00000485938 GNA11P29992 359 aa24.98■■□□□ 1.59
CLN5-202ENST00000485938 GRB10Q13322 594 aa24.98■■□□□ 1.59
CLN5-202ENST00000485938 NFRKBQ6P4R8 1299 aa24.98■■□□□ 1.59
CLN5-202ENST00000485938 SV2BQ7L1I2 683 aa24.98■■□□□ 1.59
CLN5-202ENST00000485938 CCDC84Q86UT8 332 aaPredicted RBP24.98■■□□□ 1.59
CLN5-202ENST00000485938 HYOU1Q9Y4L1 999 aa24.98■■□□□ 1.59
CLN5-202ENST00000485938 MYMKA6NI61 221 aa24.98■■□□□ 1.59
CLN5-202ENST00000485938 LINC00116Q8NCU8 138 aa24.98■■□□□ 1.59
CLN5-202ENST00000485938 TBCKQ8TEA7 893 aa24.98■■□□□ 1.59
CLN5-202ENST00000485938 RRP36Q96EU6 259 aaKnown RBP24.98■■□□□ 1.59
CLN5-202ENST00000485938 DEF6Q9H4E7 631 aa24.98■■□□□ 1.59
CLN5-202ENST00000485938 MMRN2Q9H8L6 949 aa24.98■■□□□ 1.59
CLN5-202ENST00000485938 SPATA31A1Q5TZJ5 1347 aa24.98■■□□□ 1.59
CLN5-202ENST00000485938 LRRC53A6NM62 1247 aa24.97■■□□□ 1.59
CLN5-202ENST00000485938 AKR1B10O60218 316 aa24.97■■□□□ 1.59
CLN5-202ENST00000485938 LDHBP07195 334 aaKnown RBP24.97■■□□□ 1.59
CLN5-202ENST00000485938 UNC13DQ70J99 1090 aa24.97■■□□□ 1.59
CLN5-202ENST00000485938 POTEDQ86YR6 584 aa24.97■■□□□ 1.59
CLN5-202ENST00000485938 BAP1Q92560 729 aa24.97■■□□□ 1.59
CLN5-202ENST00000485938 NLRP3Q96P20 1036 aa24.97■■□□□ 1.59
CLN5-202ENST00000485938 ALS2CR12Q96Q35 445 aa24.97■■□□□ 1.59
CLN5-202ENST00000485938 PVALEFA0A1B0GWK0 134 aa24.97■■□□□ 1.59
CLN5-202ENST00000485938 ORC2Q13416 577 aaPredicted RBP24.97■■□□□ 1.59
CLN5-202ENST00000485938 RRAGAQ7L523 313 aa24.97■■□□□ 1.59
CLN5-202ENST00000485938 SH3GL2Q99962 352 aa24.97■■□□□ 1.59
CLN5-202ENST00000485938 PJA2O43164 708 aa24.96■■□□□ 1.59
CLN5-202ENST00000485938 GUF1Q8N442 669 aaKnown RBP24.96■■□□□ 1.59
CLN5-202ENST00000485938 TGFBRAP1Q8WUH2 860 aa24.96■■□□□ 1.59
CLN5-202ENST00000485938 NAV1Q8NEY1 1877 aa24.96■■□□□ 1.59
CLN5-202ENST00000485938 DIXDC1Q155Q3 683 aa24.96■■□□□ 1.59
CLN5-202ENST00000485938 DNAJC21Q5F1R6 531 aaKnown RBP24.96■■□□□ 1.59
CLN5-202ENST00000485938 HAUS3Q68CZ6 603 aa24.96■■□□□ 1.59
CLN5-202ENST00000485938 PNMA5Q96PV4 448 aa24.96■■□□□ 1.59
CLN5-202ENST00000485938 MTMR9Q96QG7 549 aa24.96■■□□□ 1.59
CLN5-202ENST00000485938 SMARCAL1Q9NZC9 954 aa24.96■■□□□ 1.59
CLN5-202ENST00000485938 STK17AQ9UEE5 414 aa24.96■■□□□ 1.59
CLN5-202ENST00000485938 SALL4Q9UJQ4 1053 aa24.96■■□□□ 1.59
CLN5-202ENST00000485938 CXCR5P32302 372 aa24.95■■□□□ 1.58
CLN5-202ENST00000485938 TXKP42681 527 aa24.95■■□□□ 1.58
CLN5-202ENST00000485938 MAGEA1P43355 309 aa24.95■■□□□ 1.58
CLN5-202ENST00000485938 SLC7A5Q01650 507 aa24.95■■□□□ 1.58
CLN5-202ENST00000485938 ASTE1Q2TB18 679 aaPredicted RBP24.95■■□□□ 1.58
CLN5-202ENST00000485938 PSMB7Q99436 277 aa24.95■■□□□ 1.58
CLN5-202ENST00000485938 FGFR1OPO95684 399 aaKnown RBP24.95■■□□□ 1.58
CLN5-202ENST00000485938 MATR3P43243 847 aaKnown RBP eCLIP24.95■■□□□ 1.58
CLN5-202ENST00000485938 IRAK1P51617 712 aa24.95■■□□□ 1.58
CLN5-202ENST00000485938 PPP4CP60510 307 aa24.95■■□□□ 1.58
CLN5-202ENST00000485938 MRPS25P82663 173 aaKnown RBP24.95■■□□□ 1.58
CLN5-202ENST00000485938 MAPK8IP2Q13387 824 aaPredicted RBP24.95■■□□□ 1.58
CLN5-202ENST00000485938 SOGA3Q5TF21 947 aa24.95■■□□□ 1.58
CLN5-202ENST00000485938 LRRC55Q6ZSA7 311 aa24.95■■□□□ 1.58
CLN5-202ENST00000485938 EHD2Q9NZN4 543 aa24.95■■□□□ 1.58
CLN5-202ENST00000485938 STIM2Q9P246 746 aa24.95■■□□□ 1.58
CLN5-202ENST00000485938 ANKRD65E5RJM6 399 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 KCNQ2O43526 872 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 EPHB4P54760 987 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 LRRC63Q05C16 580 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 PPFIA1Q13136 1202 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 WDR66Q8TBY9 1149 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 TLR10Q9BXR5 811 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 NYXQ9GZU5 481 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 BIN2Q9UBW5 565 aaPredicted RBP24.94■■□□□ 1.58
CLN5-202ENST00000485938 SAP30BPQ9UHR5 308 aaKnown RBP24.94■■□□□ 1.58
CLN5-202ENST00000485938 THRAP3Q9Y2W1 955 aaKnown RBP24.94■■□□□ 1.58
CLN5-202ENST00000485938 SNED1Q8TER0 1413 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 NCK2O43639 380 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 BAG3O95817 575 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 GRIK5Q16478 980 aa24.94■■□□□ 1.58
CLN5-202ENST00000485938 CCDC181Q5TID7 509 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms