RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ABHD16BQ9H3Z7 469 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 HMX1Q9NP08 348 aaPredicted RBP9.49□□□□□ -0.89
SF3A1-208ENST00000485618 PAK6Q9NQU5 681 aaPredicted RBP9.49□□□□□ -0.89
SF3A1-208ENST00000485618 CNTNAP5Q8WYK1 1306 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 STK36Q9NRP7 1315 aa9.49□□□□□ -0.89
SF3A1-208ENST00000485618 A0A0G2JMZ2 1700 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 PARP14Q460N5 1801 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 A0A1W2PPC1 479 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 ESYT2A0FGR8 921 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 EIF3JO75822 258 aaKnown RBP9.48□□□□□ -0.89
SF3A1-208ENST00000485618 STAM2O75886 525 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 HSP90AA1P07900 732 aaKnown RBP9.48□□□□□ -0.89
SF3A1-208ENST00000485618 HSD17B4P51659 736 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 GHRHRQ02643 423 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 STXBP2Q15833 593 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 NTRK3Q16288 839 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 KCNV1Q6PIU1 500 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 FCHSD1Q86WN1 690 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 HSCBQ8IWL3 235 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 NECAB1Q8N987 351 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 FAM133AQ8N9E0 248 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 SYTL5Q8TDW5 730 aaPredicted RBP9.48□□□□□ -0.89
SF3A1-208ENST00000485618 DIS3LQ8TF46 1054 aaKnown RBP9.48□□□□□ -0.89
SF3A1-208ENST00000485618 PAWRQ96IZ0 340 aaKnown RBP9.48□□□□□ -0.89
SF3A1-208ENST00000485618 CRISPLD2Q9H0B8 497 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 SPC25Q9HBM1 224 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 RIC8AQ9NPQ8 531 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 RPTORQ8N122 1335 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 MYH6P13533 1939 aa9.48□□□□□ -0.89
SF3A1-208ENST00000485618 COL11A1P12107 1806 aaPredicted RBP9.47□□□□□ -0.89
SF3A1-208ENST00000485618 hCG_1642624A0A1W2PR95 340 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 STXBP3O00186 592 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 SOX1O00570 391 aaPredicted RBP9.47□□□□□ -0.89
SF3A1-208ENST00000485618 PPP1R11O60927 126 aaPredicted RBP9.47□□□□□ -0.89
SF3A1-208ENST00000485618 PDIA4P13667 645 aaKnown RBP9.47□□□□□ -0.89
SF3A1-208ENST00000485618 PRKAR2AP13861 404 aaKnown RBP9.47□□□□□ -0.89
SF3A1-208ENST00000485618 CNGA1P29973 690 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 CCND2P30279 289 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 ALDH5A1P51649 535 aaPredicted RBP9.47□□□□□ -0.89
SF3A1-208ENST00000485618 AP3B2Q13367 1082 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 BECN1Q14457 450 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 GNPTABQ3T906 1256 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 BRDTQ58F21 947 aaPredicted RBP9.47□□□□□ -0.89
SF3A1-208ENST00000485618 WWC2Q6AWC2 1192 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 NECAB2Q7Z6G3 386 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 CCDC83Q8IWF9 413 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 C7orf61Q8IZ16 206 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 NPLOC4Q8TAT6 608 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 GPKOWQ92917 476 aaPredicted RBP eCLIP9.47□□□□□ -0.89
SF3A1-208ENST00000485618 SNX21Q969T3 373 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 TMX3Q96JJ7 454 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 ZMYND12Q9H0C1 365 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 VTA1Q9NP79 307 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.47□□□□□ -0.89
SF3A1-208ENST00000485618 FAM184BQ9ULE4 1060 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 DOCK3Q8IZD9 2030 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 COL6A3P12111 3177 aa9.47□□□□□ -0.89
SF3A1-208ENST00000485618 PDCP20941 246 aa9.46□□□□□ -0.9
SF3A1-208ENST00000485618 CNTN2Q02246 1040 aa9.46□□□□□ -0.9
SF3A1-208ENST00000485618 ACVR2BQ13705 512 aa9.46□□□□□ -0.9
SF3A1-208ENST00000485618 SLC35G1Q2M3R5 365 aa9.46□□□□□ -0.9
SF3A1-208ENST00000485618 IQSEC1Q6DN90 963 aa9.46□□□□□ -0.9
SF3A1-208ENST00000485618 ARMCX2Q7L311 632 aa9.46□□□□□ -0.9
SF3A1-208ENST00000485618 REXO1Q8N1G1 1221 aaKnown RBP9.46□□□□□ -0.9
SF3A1-208ENST00000485618 TRIB2Q92519 343 aa9.46□□□□□ -0.9
SF3A1-208ENST00000485618 LRCH3Q96II8 777 aa9.46□□□□□ -0.9
SF3A1-208ENST00000485618 CDHR1Q96JP9 859 aa9.46□□□□□ -0.9
SF3A1-208ENST00000485618 NAP1L4Q99733 375 aaKnown RBP9.46□□□□□ -0.9
SF3A1-208ENST00000485618 ALG1Q9BT22 464 aa9.46□□□□□ -0.9
SF3A1-208ENST00000485618 DAXXQ9UER7 740 aaPredicted RBP9.46□□□□□ -0.9
SF3A1-208ENST00000485618 ZMYND8Q9ULU4 1186 aaPredicted RBP9.46□□□□□ -0.9
SF3A1-208ENST00000485618 SMC3Q9UQE7 1217 aa9.46□□□□□ -0.9
SF3A1-208ENST00000485618 CEP290O15078 2479 aa9.46□□□□□ -0.9
SF3A1-208ENST00000485618 ALPK3Q96L96 1907 aa9.46□□□□□ -0.9
SF3A1-208ENST00000485618 ZNFX1Q9P2E3 1918 aaKnown RBP9.45□□□□□ -0.9
SF3A1-208ENST00000485618 SOWAHBA6NEL2 793 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 NKRFO15226 690 aaKnown RBP eCLIP9.45□□□□□ -0.9
SF3A1-208ENST00000485618 SEPT4O43236 478 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 ZEB2O60315 1214 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 NR3C2P08235 984 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 TGFB3P10600 412 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 RARBP10826 455 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 AKR1A1P14550 325 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 HOXA13P31271 388 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-208ENST00000485618 CYP2C19P33261 490 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 ZNF76P36508 570 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 CACNB2Q08289 660 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-208ENST00000485618 TRIM32Q13049 653 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 GNL2Q13823 731 aaKnown RBP9.45□□□□□ -0.9
SF3A1-208ENST00000485618 PKN1Q16512 942 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 CCL14Q16627 93 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 SLC30A10Q6XR72 485 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 NLRX1Q86UT6 975 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 VSIG10LQ86VR7 867 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 BLIDQ8IZY5 108 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 ANKLE1Q8NAG6 615 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 ARRDC4Q8NCT1 418 aa9.45□□□□□ -0.9
SF3A1-208ENST00000485618 GIMAP8Q8ND71 665 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-208ENST00000485618 NSUN7Q8NE18 718 aaKnown RBP9.45□□□□□ -0.9
SF3A1-208ENST00000485618 MORC4Q8TE76 937 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms