RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 LIMCH1Q9UPQ0 1083 aa20.84■□□□□ 0.93
CNKSR1-208ENST00000484874 LCTP09848 1927 aa20.84■□□□□ 0.93
CNKSR1-208ENST00000484874 BRCA2P51587 3418 aa20.83■□□□□ 0.93
CNKSR1-208ENST00000484874 PDE4DQ08499 809 aa20.83■□□□□ 0.93
CNKSR1-208ENST00000484874 SSRP1Q08945 709 aaKnown RBP20.83■□□□□ 0.93
CNKSR1-208ENST00000484874 ME3Q16798 604 aa20.83■□□□□ 0.93
CNKSR1-208ENST00000484874 ARHGEF16Q5VV41 709 aa20.83■□□□□ 0.93
CNKSR1-208ENST00000484874 TAPT1Q6NXT6 567 aa20.83■□□□□ 0.93
CNKSR1-208ENST00000484874 TRIM22Q8IYM9 498 aa20.83■□□□□ 0.93
CNKSR1-208ENST00000484874 PHKBQ93100 1093 aa20.83■□□□□ 0.93
CNKSR1-208ENST00000484874 PXMP2Q9NR77 195 aa20.83■□□□□ 0.93
CNKSR1-208ENST00000484874 RBM47A0AV96 593 aaKnown RBP20.82■□□□□ 0.92
CNKSR1-208ENST00000484874 STXBP3O00186 592 aa20.82■□□□□ 0.92
CNKSR1-208ENST00000484874 CDKL5O76039 1030 aa20.82■□□□□ 0.92
CNKSR1-208ENST00000484874 HOXA13P31271 388 aaPredicted RBP20.82■□□□□ 0.92
CNKSR1-208ENST00000484874 STXBP2Q15833 593 aa20.82■□□□□ 0.92
CNKSR1-208ENST00000484874 CCDC144BQ3MJ40 725 aa20.82■□□□□ 0.92
CNKSR1-208ENST00000484874 UBE2Q1Q7Z7E8 422 aa20.82■□□□□ 0.92
CNKSR1-208ENST00000484874 FAM177A1Q8N128 213 aaPredicted RBP20.82■□□□□ 0.92
CNKSR1-208ENST00000484874 GPKOWQ92917 476 aaPredicted RBP eCLIP20.82■□□□□ 0.92
CNKSR1-208ENST00000484874 SLC26A6Q9BXS9 759 aa20.82■□□□□ 0.92
CNKSR1-208ENST00000484874 RIC8AQ9NPQ8 531 aa20.82■□□□□ 0.92
CNKSR1-208ENST00000484874 SH3GLB2Q9NR46 395 aa20.82■□□□□ 0.92
CNKSR1-208ENST00000484874 ZHX1Q9UKY1 873 aaPredicted RBP20.82■□□□□ 0.92
CNKSR1-208ENST00000484874 MCM3APO60318 1980 aa20.81■□□□□ 0.92
CNKSR1-208ENST00000484874 DUSP11O75319 330 aaKnown RBP20.81■□□□□ 0.92
CNKSR1-208ENST00000484874 EIF3JO75822 258 aaKnown RBP20.81■□□□□ 0.92
CNKSR1-208ENST00000484874 NR3C2P08235 984 aa20.81■□□□□ 0.92
CNKSR1-208ENST00000484874 RARBP10826 455 aa20.81■□□□□ 0.92
CNKSR1-208ENST00000484874 NAPAP54920 295 aa20.81■□□□□ 0.92
CNKSR1-208ENST00000484874 TYW1BQ6NUM6 668 aa20.81■□□□□ 0.92
CNKSR1-208ENST00000484874 USP17L6PQ6QN14 398 aa20.81■□□□□ 0.92
CNKSR1-208ENST00000484874 VSIG10LQ86VR7 867 aa20.81■□□□□ 0.92
CNKSR1-208ENST00000484874 ARRDC4Q8NCT1 418 aa20.81■□□□□ 0.92
CNKSR1-208ENST00000484874 SMARCC2Q8TAQ2 1214 aa20.81■□□□□ 0.92
CNKSR1-208ENST00000484874 CCDC12Q8WUD4 166 aaPredicted RBP20.81■□□□□ 0.92
CNKSR1-208ENST00000484874 ZSCAN31Q96LW9 406 aaPredicted RBP20.81■□□□□ 0.92
CNKSR1-208ENST00000484874 PDCD2LQ9BRP1 358 aa20.81■□□□□ 0.92
CNKSR1-208ENST00000484874 ESYT2A0FGR8 921 aa20.8■□□□□ 0.92
CNKSR1-208ENST00000484874 SMCO2A6NFE2 343 aa20.8■□□□□ 0.92
CNKSR1-208ENST00000484874 DEXIO95424 95 aa20.8■□□□□ 0.92
CNKSR1-208ENST00000484874 FCHSD1Q86WN1 690 aa20.8■□□□□ 0.92
CNKSR1-208ENST00000484874 ZMYND12Q9H0C1 365 aa20.8■□□□□ 0.92
CNKSR1-208ENST00000484874 Q9Y3F1 56 aa20.8■□□□□ 0.92
CNKSR1-208ENST00000484874 FRMPD4Q14CM0 1322 aa20.79■□□□□ 0.92
CNKSR1-208ENST00000484874 FOSP01100 380 aaPredicted RBP20.79■□□□□ 0.92
CNKSR1-208ENST00000484874 MNX1P50219 401 aaPredicted RBP20.79■□□□□ 0.92
CNKSR1-208ENST00000484874 NKX3-2P78367 333 aa20.79■□□□□ 0.92
CNKSR1-208ENST00000484874 TNFAIP2Q03169 654 aa20.79■□□□□ 0.92
CNKSR1-208ENST00000484874 XRRA1Q6P2D8 792 aa20.79■□□□□ 0.92
CNKSR1-208ENST00000484874 GTF3C6Q969F1 213 aa20.79■□□□□ 0.92
CNKSR1-208ENST00000484874 DDX49Q9Y6V7 483 aaKnown RBP20.79■□□□□ 0.92
CNKSR1-208ENST00000484874 ST18O60284 1047 aa20.78■□□□□ 0.92
CNKSR1-208ENST00000484874 STAM2O75886 525 aa20.78■□□□□ 0.92
CNKSR1-208ENST00000484874 EIF2AK2P19525 551 aaKnown RBP20.78■□□□□ 0.92
CNKSR1-208ENST00000484874 PGM5Q15124 567 aa20.78■□□□□ 0.92
CNKSR1-208ENST00000484874 MCTP2Q6DN12 878 aa20.78■□□□□ 0.92
CNKSR1-208ENST00000484874 EEPD1Q7L9B9 569 aa20.78■□□□□ 0.92
CNKSR1-208ENST00000484874 PDGFCQ9NRA1 345 aa20.78■□□□□ 0.92
CNKSR1-208ENST00000484874 GNEQ9Y223 722 aaKnown RBP20.78■□□□□ 0.92
CNKSR1-208ENST00000484874 STK36Q9NRP7 1315 aa20.78■□□□□ 0.92
CNKSR1-208ENST00000484874 LARGE1O95461 756 aa20.77■□□□□ 0.92
CNKSR1-208ENST00000484874 CTDNEP1O95476 244 aa20.77■□□□□ 0.92
CNKSR1-208ENST00000484874 GNA11P29992 359 aa20.77■□□□□ 0.92
CNKSR1-208ENST00000484874 ADCYAP1R1P41586 468 aa20.77■□□□□ 0.92
CNKSR1-208ENST00000484874 ADCY7P51828 1080 aa20.77■□□□□ 0.92
CNKSR1-208ENST00000484874 DUSP28Q4G0W2 176 aa20.77■□□□□ 0.92
CNKSR1-208ENST00000484874 FBXO16Q8IX29 292 aaPredicted RBP20.77■□□□□ 0.92
CNKSR1-208ENST00000484874 NECAB1Q8N987 351 aa20.77■□□□□ 0.92
CNKSR1-208ENST00000484874 SCFD2Q8WU76 684 aa20.77■□□□□ 0.92
CNKSR1-208ENST00000484874 WDR11Q9BZH6 1224 aa20.77■□□□□ 0.92
CNKSR1-208ENST00000484874 C6orf50Q9HD87 102 aa20.77■□□□□ 0.92
CNKSR1-208ENST00000484874 XPNPEP3Q9NQH7 507 aa20.77■□□□□ 0.92
CNKSR1-208ENST00000484874 SH2B1Q9NRF2 756 aaPredicted RBP20.77■□□□□ 0.92
CNKSR1-208ENST00000484874 DNM1LO00429 736 aa20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 NKRFO15226 690 aaKnown RBP eCLIP20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 FARP2O94887 1054 aaPredicted RBP20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 CCND2P30279 289 aa20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 CLK2P49760 499 aaKnown RBP20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 GJA9P57773 515 aa20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 ANO1Q5XXA6 986 aa20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 NOL8Q76FK4 1167 aaKnown RBP20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 NECAB2Q7Z6G3 386 aa20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 RNF180Q86T96 592 aa20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 KLHDC9Q8NEP7 349 aa20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 CCDC148Q8NFR7 591 aa20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 TSEN34Q9BSV6 310 aaKnown RBP20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 UPF3AQ9H1J1 476 aaKnown RBP20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 PCDHA6Q9UN73 950 aa20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 PCDHA8Q9Y5H6 950 aa20.76■□□□□ 0.91
CNKSR1-208ENST00000484874 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.75■□□□□ 0.91
CNKSR1-208ENST00000484874 SPDYE3A6NKU9 549 aa20.75■□□□□ 0.91
CNKSR1-208ENST00000484874 ADCY6O43306 1168 aa20.75■□□□□ 0.91
CNKSR1-208ENST00000484874 PPFIA3O75145 1194 aa20.75■□□□□ 0.91
CNKSR1-208ENST00000484874 ADAMTS4O75173 837 aa20.75■□□□□ 0.91
CNKSR1-208ENST00000484874 TGFB3P10600 412 aa20.75■□□□□ 0.91
CNKSR1-208ENST00000484874 SMPD1P17405 629 aa20.75■□□□□ 0.91
CNKSR1-208ENST00000484874 MCM2P49736 904 aa20.75■□□□□ 0.91
CNKSR1-208ENST00000484874 AP3B2Q13367 1082 aa20.75■□□□□ 0.91
CNKSR1-208ENST00000484874 LRRC41Q15345 812 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms