RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 TANGO6Q9C0B7 1094 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 KBTBD4Q9NVX7 518 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 FZD1Q9UP38 647 aa18.82■□□□□ 0.6
CTSA-207ENST00000484855 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.82■□□□□ 0.6
CTSA-207ENST00000484855 RPN1P04843 607 aaKnown RBP18.81■□□□□ 0.6
CTSA-207ENST00000484855 FMR1Q06787 632 aaKnown RBP eCLIP18.81■□□□□ 0.6
CTSA-207ENST00000484855 CT47A1Q5JQC4 288 aaPredicted RBP18.81■□□□□ 0.6
CTSA-207ENST00000484855 WDR18Q9BV38 432 aa18.81■□□□□ 0.6
CTSA-207ENST00000484855 HSD3B7Q9H2F3 369 aa18.81■□□□□ 0.6
CTSA-207ENST00000484855 ADARB2Q9NS39 739 aaKnown RBP18.81■□□□□ 0.6
CTSA-207ENST00000484855 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.81■□□□□ 0.6
CTSA-207ENST00000484855 GCOM1H8Y6P7 765 aaPredicted RBP18.81■□□□□ 0.6
CTSA-207ENST00000484855 TPM3P06753 285 aa18.81■□□□□ 0.6
CTSA-207ENST00000484855 POLR2MP0CAP2 368 aa18.81■□□□□ 0.6
CTSA-207ENST00000484855 VCAM1P19320 739 aa18.81■□□□□ 0.6
CTSA-207ENST00000484855 KRT79Q5XKE5 535 aa18.81■□□□□ 0.6
CTSA-207ENST00000484855 FCHSD1Q86WN1 690 aa18.81■□□□□ 0.6
CTSA-207ENST00000484855 SNX29Q8TEQ0 813 aa18.81■□□□□ 0.6
CTSA-207ENST00000484855 CDK5RAP3Q96JB5 506 aa18.81■□□□□ 0.6
CTSA-207ENST00000484855 KCNMB3Q9NPA1 279 aa18.81■□□□□ 0.6
CTSA-207ENST00000484855 EMILIN3Q9NT22 766 aa18.81■□□□□ 0.6
CTSA-207ENST00000484855 PCDHA12Q9UN75 941 aa18.81■□□□□ 0.6
CTSA-207ENST00000484855 ICAM1P05362 532 aa18.8■□□□□ 0.6
CTSA-207ENST00000484855 PTPRAP18433 802 aa18.8■□□□□ 0.6
CTSA-207ENST00000484855 ERCC5P28715 1186 aaPredicted RBP18.8■□□□□ 0.6
CTSA-207ENST00000484855 SPP2Q13103 211 aa18.8■□□□□ 0.6
CTSA-207ENST00000484855 SUPT20HL1Q3ZLR7 823 aa18.8■□□□□ 0.6
CTSA-207ENST00000484855 ENOX1Q8TC92 643 aaKnown RBP18.8■□□□□ 0.6
CTSA-207ENST00000484855 GJA10Q969M2 543 aa18.8■□□□□ 0.6
CTSA-207ENST00000484855 CCPG1Q9ULG6 757 aa18.8■□□□□ 0.6
CTSA-207ENST00000484855 GRB10Q13322 594 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 Q4G0T1 1027 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 PRR16Q569H4 304 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 C9orf131Q5VYM1 1079 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 TRMT44Q8IYL2 757 aaKnown RBP18.79■□□□□ 0.6
CTSA-207ENST00000484855 SLFN12Q8IYM2 578 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 SMYD4Q8IYR2 804 aaPredicted RBP18.79■□□□□ 0.6
CTSA-207ENST00000484855 ZNF280CQ8ND82 737 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 KLRG1Q96E93 195 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 FANCLQ9NW38 375 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 COL11A1P12107 1806 aaPredicted RBP18.79■□□□□ 0.6
CTSA-207ENST00000484855 FLOT1O75955 427 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 ATP1A3P13637 1013 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 CD44P16070 742 aaKnown RBP18.79■□□□□ 0.6
CTSA-207ENST00000484855 BACE1P56817 501 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 TBC1D5Q92609 795 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 AGBL1Q96MI9 1066 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 ZNF830Q96NB3 372 aaPredicted RBP18.79■□□□□ 0.6
CTSA-207ENST00000484855 PNMA5Q96PV4 448 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 RPAP3Q9H6T3 665 aaPredicted RBP18.79■□□□□ 0.6
CTSA-207ENST00000484855 IFNKQ9P0W0 207 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 STK17AQ9UEE5 414 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 WDR90Q96KV7 1748 aa18.79■□□□□ 0.6
CTSA-207ENST00000484855 ZNF536O15090 1300 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 SYNRGQ9UMZ2 1314 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 CIITAP33076 1130 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 FANCCQ00597 558 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 ZNF658Q5TYW1 1059 aaPredicted RBP18.78■□□□□ 0.6
CTSA-207ENST00000484855 KLHL10Q6JEL2 608 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 EHMT1Q9H9B1 1298 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 NFE2L3Q9Y4A8 694 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 OTOFQ9HC10 1997 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 FAM86B1E9PN63 330 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 CYP3A4P08684 503 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 FAM86B2P0C5J1 330 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 ZNF76P36508 570 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 ETNPPLQ8TBG4 499 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 UIMC1Q96RL1 719 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 XPO4Q9C0E2 1151 aaKnown RBP18.78■□□□□ 0.6
CTSA-207ENST00000484855 PPP1R9AQ9ULJ8 1098 aa18.78■□□□□ 0.6
CTSA-207ENST00000484855 PPP1R3GB7ZBB8 358 aa18.77■□□□□ 0.6
CTSA-207ENST00000484855 TBX3O15119 743 aa18.77■□□□□ 0.6
CTSA-207ENST00000484855 PTGS1P23219 599 aa18.77■□□□□ 0.6
CTSA-207ENST00000484855 AMPD3Q01432 767 aa18.77■□□□□ 0.6
CTSA-207ENST00000484855 LENG9Q96B70 501 aa18.77■□□□□ 0.6
CTSA-207ENST00000484855 SLC38A10Q9HBR0 1119 aa18.77■□□□□ 0.6
CTSA-207ENST00000484855 ZHX2Q9Y6X8 837 aa18.77■□□□□ 0.6
CTSA-207ENST00000484855 RLFQ13129 1914 aa18.77■□□□□ 0.6
CTSA-207ENST00000484855 KLRC4O43908 158 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 KCNB1Q14721 858 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 TMEM119Q4V9L6 283 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 NOL9Q5SY16 702 aaKnown RBP18.76■□□□□ 0.59
CTSA-207ENST00000484855 CCDC186Q7Z3E2 898 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 MED15Q96RN5 788 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 NUDT12Q9BQG2 462 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 TRIM9Q9C026 710 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 NRBP1Q9UHY1 535 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 PAPPA2Q9BXP8 1791 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 KDM3AQ9Y4C1 1321 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 SERPINC1P01008 464 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 PRKG1Q13976 671 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 KMT5BQ4FZB7 885 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 SV2BQ7L1I2 683 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 LARP4BQ92615 738 aaKnown RBP18.76■□□□□ 0.59
CTSA-207ENST00000484855 DCPSQ96C86 337 aaKnown RBP18.76■□□□□ 0.59
CTSA-207ENST00000484855 C7orf25Q9BPX7 421 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 BLOC1S4Q9NUP1 217 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 CTNND2Q9UQB3 1225 aa18.76■□□□□ 0.59
CTSA-207ENST00000484855 CTDP1Q9Y5B0 961 aaPredicted RBP18.76■□□□□ 0.59
CTSA-207ENST00000484855 PTPRFP10586 1907 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms