RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 NPFFR2Q9Y5X5 522 aa7.79□□□□□ -1.16
CCDC66-219ENST00000484441 HCFC2Q9Y5Z7 792 aa7.79□□□□□ -1.16
CCDC66-219ENST00000484441 IQCA1LA6NCM1 817 aa7.78□□□□□ -1.16
CCDC66-219ENST00000484441 MEFVO15553 781 aaPredicted RBP7.78□□□□□ -1.16
CCDC66-219ENST00000484441 IGFBP6P24592 240 aaPredicted RBP7.78□□□□□ -1.16
CCDC66-219ENST00000484441 ECI1P42126 302 aa7.78□□□□□ -1.16
CCDC66-219ENST00000484441 RASGRF1Q13972 1273 aa7.78□□□□□ -1.16
CCDC66-219ENST00000484441 SPOCD1Q6ZMY3 1216 aa7.78□□□□□ -1.16
CCDC66-219ENST00000484441 CABP7Q86V35 215 aa7.78□□□□□ -1.16
CCDC66-219ENST00000484441 DIO2Q92813 273 aa7.78□□□□□ -1.16
CCDC66-219ENST00000484441 TSPAN17Q96FV3 270 aa7.78□□□□□ -1.16
CCDC66-219ENST00000484441 HIRIP3Q9BW71 556 aaPredicted RBP7.78□□□□□ -1.16
CCDC66-219ENST00000484441 ARHGEF4Q9NR80 690 aa7.78□□□□□ -1.16
CCDC66-219ENST00000484441 ZNF200P98182 395 aaPredicted RBP7.77□□□□□ -1.17
CCDC66-219ENST00000484441 SSPNQ14714 243 aa7.77□□□□□ -1.17
CCDC66-219ENST00000484441 AMIGO3Q86WK7 504 aa7.77□□□□□ -1.17
CCDC66-219ENST00000484441 PPIL6Q8IXY8 311 aa7.77□□□□□ -1.17
CCDC66-219ENST00000484441 CCDC113Q9H0I3 377 aa7.77□□□□□ -1.17
CCDC66-219ENST00000484441 EPB41L4AQ9HCS5 686 aaPredicted RBP7.77□□□□□ -1.17
CCDC66-219ENST00000484441 SIRPGQ9P1W8 387 aa7.77□□□□□ -1.17
CCDC66-219ENST00000484441 PLA2G2DQ9UNK4 145 aa7.77□□□□□ -1.17
CCDC66-219ENST00000484441 ZC3H12DA2A288 527 aaKnown RBP7.76□□□□□ -1.17
CCDC66-219ENST00000484441 F8W031 263 aaPredicted RBP7.76□□□□□ -1.17
CCDC66-219ENST00000484441 DLX3O60479 287 aa7.76□□□□□ -1.17
CCDC66-219ENST00000484441 FGFR1P11362 822 aa7.76□□□□□ -1.17
CCDC66-219ENST00000484441 LTBRP36941 435 aa7.76□□□□□ -1.17
CCDC66-219ENST00000484441 GTF2A2P52657 109 aa7.76□□□□□ -1.17
CCDC66-219ENST00000484441 PRR5P85299 388 aa7.76□□□□□ -1.17
CCDC66-219ENST00000484441 HSP90AA2PQ14568 343 aaPredicted RBP7.76□□□□□ -1.17
CCDC66-219ENST00000484441 NLRP10Q86W26 655 aa7.76□□□□□ -1.17
CCDC66-219ENST00000484441 RIOX2Q8IUF8 465 aa7.76□□□□□ -1.17
CCDC66-219ENST00000484441 SIAH1Q8IUQ4 282 aa7.76□□□□□ -1.17
CCDC66-219ENST00000484441 TMEFF1Q8IYR6 380 aa7.76□□□□□ -1.17
CCDC66-219ENST00000484441 ZSCAN18Q8TBC5 510 aaPredicted RBP7.76□□□□□ -1.17
CCDC66-219ENST00000484441 KCTD13Q8WZ19 329 aa7.76□□□□□ -1.17
CCDC66-219ENST00000484441 AARSD1Q9BTE6 412 aaKnown RBP7.76□□□□□ -1.17
CCDC66-219ENST00000484441 IER2Q9BTL4 223 aa7.76□□□□□ -1.17
CCDC66-219ENST00000484441 RNF38Q9H0F5 515 aa7.76□□□□□ -1.17
CCDC66-219ENST00000484441 CNOT6Q9ULM6 557 aaKnown RBP7.76□□□□□ -1.17
CCDC66-219ENST00000484441 IRAK3Q9Y616 596 aa7.76□□□□□ -1.17
CCDC66-219ENST00000484441 X6R8D5 127 aa7.76□□□□□ -1.17
CCDC66-219ENST00000484441 PDPK1O15530 556 aa7.75□□□□□ -1.17
CCDC66-219ENST00000484441 FUCA1P04066 466 aa7.75□□□□□ -1.17
CCDC66-219ENST00000484441 GTF2F1P35269 517 aaKnown RBP eCLIP7.75□□□□□ -1.17
CCDC66-219ENST00000484441 KCNJ6P48051 423 aa7.75□□□□□ -1.17
CCDC66-219ENST00000484441 RPL11P62913 178 aaKnown RBP7.75□□□□□ -1.17
CCDC66-219ENST00000484441 SLC9A5Q14940 896 aa7.75□□□□□ -1.17
CCDC66-219ENST00000484441 SF3A1Q15459 793 aaKnown RBP7.75□□□□□ -1.17
CCDC66-219ENST00000484441 CIAPIN1Q6FI81 312 aa7.75□□□□□ -1.17
CCDC66-219ENST00000484441 LCNL1Q6ZST4 164 aa7.75□□□□□ -1.17
CCDC66-219ENST00000484441 LRRC47Q8N1G4 583 aaKnown RBP7.75□□□□□ -1.17
CCDC66-219ENST00000484441 RCBTB1Q8NDN9 531 aa7.75□□□□□ -1.17
CCDC66-219ENST00000484441 PEX11GQ96HA9 241 aa7.75□□□□□ -1.17
CCDC66-219ENST00000484441 MARCH2Q9P0N8 246 aa7.75□□□□□ -1.17
CCDC66-219ENST00000484441 FBXL7Q9UJT9 491 aa7.75□□□□□ -1.17
CCDC66-219ENST00000484441 NUDT5Q9UKK9 219 aa7.75□□□□□ -1.17
CCDC66-219ENST00000484441 KCTD3Q9Y597 815 aa7.75□□□□□ -1.17
CCDC66-219ENST00000484441 TIMM13Q9Y5L4 95 aaPredicted RBP7.75□□□□□ -1.17
CCDC66-219ENST00000484441 BTBD11A6QL63 1104 aa7.74□□□□□ -1.17
CCDC66-219ENST00000484441 U2SURPO15042 1029 aaKnown RBP7.74□□□□□ -1.17
CCDC66-219ENST00000484441 PI3P19957 117 aa7.74□□□□□ -1.17
CCDC66-219ENST00000484441 SLC6A11P48066 632 aa7.74□□□□□ -1.17
CCDC66-219ENST00000484441 RASA3Q14644 834 aa7.74□□□□□ -1.17
CCDC66-219ENST00000484441 ZNF385BQ569K4 471 aa7.74□□□□□ -1.17
CCDC66-219ENST00000484441 LRP10Q7Z4F1 713 aa7.74□□□□□ -1.17
CCDC66-219ENST00000484441 RFXAPO00287 272 aa7.73□□□□□ -1.17
CCDC66-219ENST00000484441 ADCY3O60266 1144 aa7.73□□□□□ -1.17
CCDC66-219ENST00000484441 NUAK1O60285 661 aa7.73□□□□□ -1.17
CCDC66-219ENST00000484441 ZBTB7AO95365 584 aa7.73□□□□□ -1.17
CCDC66-219ENST00000484441 NTRK1P04629 796 aa7.73□□□□□ -1.17
CCDC66-219ENST00000484441 CAP1Q01518 475 aa7.73□□□□□ -1.17
CCDC66-219ENST00000484441 TARBP2Q15633 366 aaKnown RBP7.73□□□□□ -1.17
CCDC66-219ENST00000484441 MROH9Q5TGP6 573 aa7.73□□□□□ -1.17
CCDC66-219ENST00000484441 RSPO2Q6UXX9 243 aaPredicted RBP7.73□□□□□ -1.17
CCDC66-219ENST00000484441 SPATC1Q76KD6 591 aa7.73□□□□□ -1.17
CCDC66-219ENST00000484441 FAM129CQ86XR2 697 aa7.73□□□□□ -1.17
CCDC66-219ENST00000484441 DCP2Q8IU60 420 aaKnown RBP7.73□□□□□ -1.17
CCDC66-219ENST00000484441 TEX2Q8IWB9 1127 aa7.73□□□□□ -1.17
CCDC66-219ENST00000484441 OSBP2Q969R2 916 aa7.73□□□□□ -1.17
CCDC66-219ENST00000484441 DACT3Q96B18 629 aaPredicted RBP7.73□□□□□ -1.17
CCDC66-219ENST00000484441 C22orf46C9J442 243 aa7.72□□□□□ -1.17
CCDC66-219ENST00000484441 MYO1BO43795 1136 aa7.72□□□□□ -1.17
CCDC66-219ENST00000484441 BUB1BO60566 1050 aaPredicted RBP7.72□□□□□ -1.17
CCDC66-219ENST00000484441 ASGR2P07307 311 aa7.72□□□□□ -1.17
CCDC66-219ENST00000484441 LCP1P13796 627 aa7.72□□□□□ -1.17
CCDC66-219ENST00000484441 FPR2P25090 351 aa7.72□□□□□ -1.17
CCDC66-219ENST00000484441 BCL6P41182 706 aa7.72□□□□□ -1.17
CCDC66-219ENST00000484441 NCKAP1LP55160 1127 aa7.72□□□□□ -1.17
CCDC66-219ENST00000484441 USP33Q8TEY7 942 aa7.72□□□□□ -1.17
CCDC66-219ENST00000484441 CPA5Q8WXQ8 436 aa7.72□□□□□ -1.17
CCDC66-219ENST00000484441 SPATA9Q9BWV2 254 aa7.72□□□□□ -1.17
CCDC66-219ENST00000484441 CDIP1Q9H305 208 aa7.72□□□□□ -1.17
CCDC66-219ENST00000484441 RXFP1Q9HBX9 757 aa7.72□□□□□ -1.17
CCDC66-219ENST00000484441 GPR27Q9NS67 375 aa7.72□□□□□ -1.17
CCDC66-219ENST00000484441 DBR1Q9UK59 544 aaKnown RBP7.72□□□□□ -1.17
CCDC66-219ENST00000484441 TRAV20A0A0B4J274 112 aa7.71□□□□□ -1.18
CCDC66-219ENST00000484441 H7BY64 318 aa7.71□□□□□ -1.18
CCDC66-219ENST00000484441 ZSCAN22P10073 491 aaPredicted RBP7.71□□□□□ -1.18
CCDC66-219ENST00000484441 PABPC1P11940 636 aaKnown RBP7.71□□□□□ -1.18
CCDC66-219ENST00000484441 PFKLP17858 780 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms