RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 MYADML2A6NDP7 307 aa25.59■■□□□ 1.69
CNTNAP3B-208ENST00000484254 EIF5BO60841 1220 aaKnown RBP25.59■■□□□ 1.69
CNTNAP3B-208ENST00000484254 HOXA13P31271 388 aaPredicted RBP25.59■■□□□ 1.69
CNTNAP3B-208ENST00000484254 PPP2R5BQ15173 497 aa25.59■■□□□ 1.69
CNTNAP3B-208ENST00000484254 ARHGEF16Q5VV41 709 aa25.59■■□□□ 1.69
CNTNAP3B-208ENST00000484254 C7orf61Q8IZ16 206 aa25.59■■□□□ 1.69
CNTNAP3B-208ENST00000484254 PXMP2Q9NR77 195 aa25.59■■□□□ 1.69
CNTNAP3B-208ENST00000484254 FAM217BQ9NTX9 383 aaPredicted RBP25.59■■□□□ 1.69
CNTNAP3B-208ENST00000484254 NAP1L2Q9ULW6 460 aaPredicted RBP25.59■■□□□ 1.69
CNTNAP3B-208ENST00000484254 Q9Y3F1 56 aa25.59■■□□□ 1.69
CNTNAP3B-208ENST00000484254 CTAGE5O15320 804 aa25.58■■□□□ 1.69
CNTNAP3B-208ENST00000484254 ACLYP53396 1101 aa25.58■■□□□ 1.69
CNTNAP3B-208ENST00000484254 ATN1P54259 1190 aaPredicted RBP25.58■■□□□ 1.69
CNTNAP3B-208ENST00000484254 IRX5P78411 483 aaPredicted RBP25.58■■□□□ 1.69
CNTNAP3B-208ENST00000484254 FUT2Q10981 343 aa25.58■■□□□ 1.69
CNTNAP3B-208ENST00000484254 KCNA10Q16322 511 aa25.58■■□□□ 1.69
CNTNAP3B-208ENST00000484254 DUSP28Q4G0W2 176 aa25.58■■□□□ 1.69
CNTNAP3B-208ENST00000484254 SLC39A5Q6ZMH5 540 aa25.58■■□□□ 1.69
CNTNAP3B-208ENST00000484254 TLK2Q86UE8 772 aa25.58■■□□□ 1.69
CNTNAP3B-208ENST00000484254 WDR11Q9BZH6 1224 aa25.58■■□□□ 1.69
CNTNAP3B-208ENST00000484254 CYP46A1Q9Y6A2 500 aa25.58■■□□□ 1.69
CNTNAP3B-208ENST00000484254 CNTNAP5Q8WYK1 1306 aa25.58■■□□□ 1.69
CNTNAP3B-208ENST00000484254 A0A1W2PQ45 241 aaPredicted RBP25.57■■□□□ 1.68
CNTNAP3B-208ENST00000484254 A0A1W2PQY0 241 aa25.57■■□□□ 1.68
CNTNAP3B-208ENST00000484254 hCG_1642624A0A1W2PR95 340 aa25.57■■□□□ 1.68
CNTNAP3B-208ENST00000484254 MOXD2PA6NHM9 499 aa25.57■■□□□ 1.68
CNTNAP3B-208ENST00000484254 EIF2AK2P19525 551 aaKnown RBP25.57■■□□□ 1.68
CNTNAP3B-208ENST00000484254 CDC27P30260 824 aa25.57■■□□□ 1.68
CNTNAP3B-208ENST00000484254 STXBP2Q15833 593 aa25.57■■□□□ 1.68
CNTNAP3B-208ENST00000484254 GNASQ5JWF2 1037 aa25.57■■□□□ 1.68
CNTNAP3B-208ENST00000484254 TMEM63BQ5T3F8 832 aa25.57■■□□□ 1.68
CNTNAP3B-208ENST00000484254 PCSK9Q8NBP7 692 aaKnown RBP25.57■■□□□ 1.68
CNTNAP3B-208ENST00000484254 SCFD2Q8WU76 684 aa25.57■■□□□ 1.68
CNTNAP3B-208ENST00000484254 AP5M1Q9H0R1 490 aa25.57■■□□□ 1.68
CNTNAP3B-208ENST00000484254 DYNC1LI2O43237 492 aaPredicted RBP25.56■■□□□ 1.68
CNTNAP3B-208ENST00000484254 NR3C2P08235 984 aa25.56■■□□□ 1.68
CNTNAP3B-208ENST00000484254 METAP2P50579 478 aaKnown RBP eCLIP25.56■■□□□ 1.68
CNTNAP3B-208ENST00000484254 SNX17Q15036 470 aa25.56■■□□□ 1.68
CNTNAP3B-208ENST00000484254 NID2Q14112 1375 aa25.56■■□□□ 1.68
CNTNAP3B-208ENST00000484254 CCDC196A0A1B0GTZ2 297 aa25.55■■□□□ 1.68
CNTNAP3B-208ENST00000484254 PTGS1P23219 599 aa25.55■■□□□ 1.68
CNTNAP3B-208ENST00000484254 EVCP57679 992 aa25.55■■□□□ 1.68
CNTNAP3B-208ENST00000484254 C1orf53Q5VUE5 145 aa25.55■■□□□ 1.68
CNTNAP3B-208ENST00000484254 FCHSD1Q86WN1 690 aa25.55■■□□□ 1.68
CNTNAP3B-208ENST00000484254 PDCD2LQ9BRP1 358 aa25.55■■□□□ 1.68
CNTNAP3B-208ENST00000484254 CEP290O15078 2479 aa25.55■■□□□ 1.68
CNTNAP3B-208ENST00000484254 EIF3JO75822 258 aaKnown RBP25.54■■□□□ 1.68
CNTNAP3B-208ENST00000484254 ADD1P35611 737 aaKnown RBP25.54■■□□□ 1.68
CNTNAP3B-208ENST00000484254 RTP1P59025 263 aa25.54■■□□□ 1.68
CNTNAP3B-208ENST00000484254 ANAPC15P60006 121 aa25.54■■□□□ 1.68
CNTNAP3B-208ENST00000484254 BEX3Q00994 111 aa25.54■■□□□ 1.68
CNTNAP3B-208ENST00000484254 FSCN1Q16658 493 aaKnown RBP25.54■■□□□ 1.68
CNTNAP3B-208ENST00000484254 UPF3BQ9BZI7 483 aaKnown RBP25.54■■□□□ 1.68
CNTNAP3B-208ENST00000484254 DNAH12Q6ZR08 3092 aa25.54■■□□□ 1.68
CNTNAP3B-208ENST00000484254 PIK3CDO00329 1044 aa25.53■■□□□ 1.68
CNTNAP3B-208ENST00000484254 NKRFO15226 690 aaKnown RBP eCLIP25.53■■□□□ 1.68
CNTNAP3B-208ENST00000484254 ASGR1P07306 291 aa25.53■■□□□ 1.68
CNTNAP3B-208ENST00000484254 TOB2Q14106 344 aaPredicted RBP25.53■■□□□ 1.68
CNTNAP3B-208ENST00000484254 TTLL4Q14679 1199 aa25.53■■□□□ 1.68
CNTNAP3B-208ENST00000484254 PGM5Q15124 567 aa25.53■■□□□ 1.68
CNTNAP3B-208ENST00000484254 CUL5Q93034 780 aa25.53■■□□□ 1.68
CNTNAP3B-208ENST00000484254 V9GY48 417 aaPredicted RBP25.53■■□□□ 1.68
CNTNAP3B-208ENST00000484254 MEIS2O14770 477 aa25.52■■□□□ 1.68
CNTNAP3B-208ENST00000484254 TXNP10599 105 aaKnown RBP25.52■■□□□ 1.68
CNTNAP3B-208ENST00000484254 SEPT14Q6ZU15 432 aa25.52■■□□□ 1.68
CNTNAP3B-208ENST00000484254 HEATR3Q7Z4Q2 680 aa25.52■■□□□ 1.68
CNTNAP3B-208ENST00000484254 VSIG10LQ86VR7 867 aa25.52■■□□□ 1.68
CNTNAP3B-208ENST00000484254 SMARCC2Q8TAQ2 1214 aa25.52■■□□□ 1.68
CNTNAP3B-208ENST00000484254 GPKOWQ92917 476 aaPredicted RBP eCLIP25.52■■□□□ 1.68
CNTNAP3B-208ENST00000484254 GLT1D1Q96MS3 346 aa25.52■■□□□ 1.68
CNTNAP3B-208ENST00000484254 PSTPIP2Q9H939 334 aa25.52■■□□□ 1.68
CNTNAP3B-208ENST00000484254 STARD7Q9NQZ5 370 aa25.52■■□□□ 1.68
CNTNAP3B-208ENST00000484254 ZMYND8Q9ULU4 1186 aaPredicted RBP25.52■■□□□ 1.68
CNTNAP3B-208ENST00000484254 ATP11BQ9Y2G3 1177 aa25.52■■□□□ 1.68
CNTNAP3B-208ENST00000484254 ZEB2O60315 1214 aa25.51■■□□□ 1.67
CNTNAP3B-208ENST00000484254 MYCLP12524 364 aaPredicted RBP25.51■■□□□ 1.67
CNTNAP3B-208ENST00000484254 PDIA3P30101 505 aaKnown RBP25.51■■□□□ 1.67
CNTNAP3B-208ENST00000484254 TRIM60Q495X7 471 aa25.51■■□□□ 1.67
CNTNAP3B-208ENST00000484254 WWC2Q6AWC2 1192 aa25.51■■□□□ 1.67
CNTNAP3B-208ENST00000484254 CCDC62Q6P9F0 684 aa25.51■■□□□ 1.67
CNTNAP3B-208ENST00000484254 USP17L6PQ6QN14 398 aa25.51■■□□□ 1.67
CNTNAP3B-208ENST00000484254 IL31RAQ8NI17 732 aa25.51■■□□□ 1.67
CNTNAP3B-208ENST00000484254 PDRG1Q9NUG6 133 aa25.51■■□□□ 1.67
CNTNAP3B-208ENST00000484254 ELP1O95163 1332 aa25.51■■□□□ 1.67
CNTNAP3B-208ENST00000484254 FRMPD4Q14CM0 1322 aa25.51■■□□□ 1.67
CNTNAP3B-208ENST00000484254 KIAA1217Q5T5P2 1943 aa25.51■■□□□ 1.67
CNTNAP3B-208ENST00000484254 ARIH2O95376 493 aa25.5■■□□□ 1.67
CNTNAP3B-208ENST00000484254 SEC24BO95487 1268 aa25.5■■□□□ 1.67
CNTNAP3B-208ENST00000484254 CCND2P30279 289 aa25.5■■□□□ 1.67
CNTNAP3B-208ENST00000484254 OR6J1Q8NGC5 347 aa25.5■■□□□ 1.67
CNTNAP3B-208ENST00000484254 IL17RAQ96F46 866 aa25.5■■□□□ 1.67
CNTNAP3B-208ENST00000484254 hCG_1984214I3L0E3 225 aa25.49■■□□□ 1.67
CNTNAP3B-208ENST00000484254 SYN1P17600 705 aa25.49■■□□□ 1.67
CNTNAP3B-208ENST00000484254 PPP1R18Q6NYC8 613 aa25.49■■□□□ 1.67
CNTNAP3B-208ENST00000484254 ZNF713Q8N859 430 aaPredicted RBP25.49■■□□□ 1.67
CNTNAP3B-208ENST00000484254 COPS5Q92905 334 aa25.49■■□□□ 1.67
CNTNAP3B-208ENST00000484254 CABYRO75952 493 aa25.48■■□□□ 1.67
CNTNAP3B-208ENST00000484254 CPT1AP50416 773 aa25.48■■□□□ 1.67
CNTNAP3B-208ENST00000484254 VTI1AQ96AJ9 217 aa25.48■■□□□ 1.67
CNTNAP3B-208ENST00000484254 ZNF274Q96GC6 653 aaPredicted RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms