RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-222ENST00000483882 SRBD1Q8N5C6 995 aaKnown RBP17.3■□□□□ 0.36
NR1H3-222ENST00000483882 FAM133AQ8N9E0 248 aa17.3■□□□□ 0.36
NR1H3-222ENST00000483882 MTMR8Q96EF0 704 aa17.3■□□□□ 0.36
NR1H3-222ENST00000483882 UPF3AQ9H1J1 476 aaKnown RBP17.3■□□□□ 0.36
NR1H3-222ENST00000483882 RANBP17Q9H2T7 1088 aaKnown RBP17.3■□□□□ 0.36
NR1H3-222ENST00000483882 SEMA6BQ9H3T3 888 aa17.3■□□□□ 0.36
NR1H3-222ENST00000483882 JMJD4Q9H9V9 463 aa17.3■□□□□ 0.36
NR1H3-222ENST00000483882 NID2Q14112 1375 aa17.29■□□□□ 0.36
NR1H3-222ENST00000483882 ELP1O95163 1332 aa17.29■□□□□ 0.36
NR1H3-222ENST00000483882 SOWAHBA6NEL2 793 aa17.29■□□□□ 0.36
NR1H3-222ENST00000483882 GOLGA8BA8MQT2 603 aa17.29■□□□□ 0.36
NR1H3-222ENST00000483882 LARGE1O95461 756 aa17.29■□□□□ 0.36
NR1H3-222ENST00000483882 CALM1P0DP23 149 aa17.29■□□□□ 0.36
NR1H3-222ENST00000483882 CALM2P0DP24 149 aa17.29■□□□□ 0.36
NR1H3-222ENST00000483882 CALM3P0DP25 149 aa17.29■□□□□ 0.36
NR1H3-222ENST00000483882 RCAN1P53805 252 aa17.29■□□□□ 0.36
NR1H3-222ENST00000483882 FUT2Q10981 343 aa17.29■□□□□ 0.36
NR1H3-222ENST00000483882 CDX2Q99626 313 aaPredicted RBP17.29■□□□□ 0.36
NR1H3-222ENST00000483882 RIOX1Q9H6W3 641 aa17.29■□□□□ 0.36
NR1H3-222ENST00000483882 MROH7Q68CQ1 1323 aa17.28■□□□□ 0.36
NR1H3-222ENST00000483882 A0A0U1RQG5 324 aaPredicted RBP17.28■□□□□ 0.36
NR1H3-222ENST00000483882 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.28■□□□□ 0.36
NR1H3-222ENST00000483882 ASB14A6NK59 587 aa17.28■□□□□ 0.36
NR1H3-222ENST00000483882 GOLGA8AA7E2F4 631 aa17.28■□□□□ 0.36
NR1H3-222ENST00000483882 CD2BP2O95400 341 aaKnown RBP17.28■□□□□ 0.36
NR1H3-222ENST00000483882 ADD1P35611 737 aaKnown RBP17.28■□□□□ 0.36
NR1H3-222ENST00000483882 TNFAIP2Q03169 654 aa17.28■□□□□ 0.36
NR1H3-222ENST00000483882 RABEP1Q15276 862 aa17.28■□□□□ 0.36
NR1H3-222ENST00000483882 SYNE3Q6ZMZ3 975 aa17.28■□□□□ 0.36
NR1H3-222ENST00000483882 TMTC3Q6ZXV5 915 aa17.28■□□□□ 0.36
NR1H3-222ENST00000483882 CTCFLQ8NI51 663 aaPredicted RBP17.28■□□□□ 0.36
NR1H3-222ENST00000483882 ZNF274Q96GC6 653 aaPredicted RBP17.28■□□□□ 0.36
NR1H3-222ENST00000483882 KATNBL1Q9H079 304 aa17.28■□□□□ 0.36
NR1H3-222ENST00000483882 NCOA5Q9HCD5 579 aaKnown RBP17.28■□□□□ 0.36
NR1H3-222ENST00000483882 VAT1LQ9HCJ6 419 aa17.28■□□□□ 0.36
NR1H3-222ENST00000483882 CCPG1Q9ULG6 757 aa17.28■□□□□ 0.36
NR1H3-222ENST00000483882 ARVCFO00192 962 aa17.27■□□□□ 0.36
NR1H3-222ENST00000483882 PPP1R11O60927 126 aaPredicted RBP17.27■□□□□ 0.36
NR1H3-222ENST00000483882 TIMP1P01033 207 aa17.27■□□□□ 0.36
NR1H3-222ENST00000483882 CCT2P78371 535 aaKnown RBP17.27■□□□□ 0.36
NR1H3-222ENST00000483882 BEX3Q00994 111 aa17.27■□□□□ 0.36
NR1H3-222ENST00000483882 RTN1Q16799 776 aa17.27■□□□□ 0.36
NR1H3-222ENST00000483882 MUM1L1Q5H9M0 696 aa17.27■□□□□ 0.36
NR1H3-222ENST00000483882 NSMFQ6X4W1 530 aa17.27■□□□□ 0.36
NR1H3-222ENST00000483882 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.27■□□□□ 0.36
NR1H3-222ENST00000483882 TBX21Q9UL17 535 aa17.27■□□□□ 0.36
NR1H3-222ENST00000483882 NAP1L2Q9ULW6 460 aaPredicted RBP17.27■□□□□ 0.36
NR1H3-222ENST00000483882 DDX49Q9Y6V7 483 aaKnown RBP17.27■□□□□ 0.36
NR1H3-222ENST00000483882 DNAH12Q6ZR08 3092 aa17.27■□□□□ 0.36
NR1H3-222ENST00000483882 MCM3APO60318 1980 aa17.26■□□□□ 0.35
NR1H3-222ENST00000483882 TLR3O15455 904 aaKnown RBP17.26■□□□□ 0.35
NR1H3-222ENST00000483882 KIF5BP33176 963 aa17.26■□□□□ 0.35
NR1H3-222ENST00000483882 METAP2P50579 478 aaKnown RBP eCLIP17.26■□□□□ 0.35
NR1H3-222ENST00000483882 CDK7P50613 346 aa17.26■□□□□ 0.35
NR1H3-222ENST00000483882 ST3GAL1Q11201 340 aa17.26■□□□□ 0.35
NR1H3-222ENST00000483882 NTRK3Q16288 839 aa17.26■□□□□ 0.35
NR1H3-222ENST00000483882 ME3Q16798 604 aa17.26■□□□□ 0.35
NR1H3-222ENST00000483882 QRICH1Q2TAL8 776 aa17.26■□□□□ 0.35
NR1H3-222ENST00000483882 EEPD1Q7L9B9 569 aa17.26■□□□□ 0.35
NR1H3-222ENST00000483882 MYLIPQ8WY64 445 aa17.26■□□□□ 0.35
NR1H3-222ENST00000483882 PIGSQ96S52 555 aa17.26■□□□□ 0.35
NR1H3-222ENST00000483882 SPZ1Q9BXG8 430 aa17.26■□□□□ 0.35
NR1H3-222ENST00000483882 TTYH1Q9H313 450 aaPredicted RBP17.26■□□□□ 0.35
NR1H3-222ENST00000483882 CNTNAP5Q8WYK1 1306 aa17.25■□□□□ 0.35
NR1H3-222ENST00000483882 CTAGE5O15320 804 aa17.25■□□□□ 0.35
NR1H3-222ENST00000483882 PFKFB2O60825 505 aa17.25■□□□□ 0.35
NR1H3-222ENST00000483882 DTNBO60941 627 aa17.25■□□□□ 0.35
NR1H3-222ENST00000483882 SMARCA1P28370 1054 aa17.25■□□□□ 0.35
NR1H3-222ENST00000483882 GNAQP50148 359 aa17.25■□□□□ 0.35
NR1H3-222ENST00000483882 STK3Q13188 491 aa17.25■□□□□ 0.35
NR1H3-222ENST00000483882 CDC37Q16543 378 aaPredicted RBP17.25■□□□□ 0.35
NR1H3-222ENST00000483882 MFSD5Q6N075 450 aa17.25■□□□□ 0.35
NR1H3-222ENST00000483882 TLK2Q86UE8 772 aa17.25■□□□□ 0.35
NR1H3-222ENST00000483882 FBXO16Q8IX29 292 aaPredicted RBP17.25■□□□□ 0.35
NR1H3-222ENST00000483882 CCDC82Q8N4S0 544 aa17.25■□□□□ 0.35
NR1H3-222ENST00000483882 PPP1R12CQ9BZL4 782 aa17.25■□□□□ 0.35
NR1H3-222ENST00000483882 AP5M1Q9H0R1 490 aa17.25■□□□□ 0.35
NR1H3-222ENST00000483882 RBM28Q9NW13 759 aaKnown RBP17.25■□□□□ 0.35
NR1H3-222ENST00000483882 CYP39A1Q9NYL5 469 aa17.25■□□□□ 0.35
NR1H3-222ENST00000483882 RBM19Q9Y4C8 960 aaKnown RBP17.25■□□□□ 0.35
NR1H3-222ENST00000483882 ASTN1O14525 1302 aa17.24■□□□□ 0.35
NR1H3-222ENST00000483882 hCG_1642624A0A1W2PR95 340 aa17.24■□□□□ 0.35
NR1H3-222ENST00000483882 DYNC1LI2O43237 492 aaPredicted RBP17.24■□□□□ 0.35
NR1H3-222ENST00000483882 ICAM1P05362 532 aa17.24■□□□□ 0.35
NR1H3-222ENST00000483882 SMPD1P17405 629 aa17.24■□□□□ 0.35
NR1H3-222ENST00000483882 PTGS1P23219 599 aa17.24■□□□□ 0.35
NR1H3-222ENST00000483882 SCRN1Q12765 414 aa17.24■□□□□ 0.35
NR1H3-222ENST00000483882 PPIGQ13427 754 aaKnown RBP eCLIP17.24■□□□□ 0.356e-8■■□□□ 11.5
NR1H3-222ENST00000483882 ANKRD1Q15327 319 aa17.24■□□□□ 0.35
NR1H3-222ENST00000483882 CXCL17Q6UXB2 119 aa17.24■□□□□ 0.35
NR1H3-222ENST00000483882 FAM126BQ8IXS8 530 aa17.24■□□□□ 0.35
NR1H3-222ENST00000483882 NECAB1Q8N987 351 aa17.24■□□□□ 0.35
NR1H3-222ENST00000483882 MAFAQ8NHW3 353 aaPredicted RBP17.24■□□□□ 0.35
NR1H3-222ENST00000483882 PIBF1Q8WXW3 757 aa17.24■□□□□ 0.35
NR1H3-222ENST00000483882 PURBQ96QR8 312 aaKnown RBP17.24■□□□□ 0.35
NR1H3-222ENST00000483882 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.24■□□□□ 0.351e-7■□□□□ 10.8
NR1H3-222ENST00000483882 LZTS2Q9BRK4 669 aa17.24■□□□□ 0.35
NR1H3-222ENST00000483882 PDGFCQ9NRA1 345 aa17.24■□□□□ 0.35
NR1H3-222ENST00000483882 GNEQ9Y223 722 aaKnown RBP17.24■□□□□ 0.35
NR1H3-222ENST00000483882 COL6A3P12111 3177 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms