RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.06□□□□□ -1.28
COMMD3-213ENST00000483684 KIAA1522Q9P206 1035 aaPredicted RBP7.06□□□□□ -1.28
COMMD3-213ENST00000483684 PPT2Q9UMR5 302 aa7.06□□□□□ -1.28
COMMD3-213ENST00000483684 BACE2Q9Y5Z0 518 aa7.06□□□□□ -1.28
COMMD3-213ENST00000483684 CYP2C8P10632 490 aa7.05□□□□□ -1.28
COMMD3-213ENST00000483684 THBS2P35442 1172 aa7.05□□□□□ -1.28
COMMD3-213ENST00000483684 RGL3Q3MIN7 710 aa7.05□□□□□ -1.28
COMMD3-213ENST00000483684 ZNF394Q53GI3 561 aa7.05□□□□□ -1.28
COMMD3-213ENST00000483684 FAM26FQ5R3K3 315 aa7.05□□□□□ -1.28
COMMD3-213ENST00000483684 CPNE8Q86YQ8 564 aa7.05□□□□□ -1.28
COMMD3-213ENST00000483684 ADCY4Q8NFM4 1077 aa7.05□□□□□ -1.28
COMMD3-213ENST00000483684 RNF34Q969K3 372 aa7.05□□□□□ -1.28
COMMD3-213ENST00000483684 C2orf71A6NGG8 1288 aa7.04□□□□□ -1.28
COMMD3-213ENST00000483684 SUV39H1O43463 412 aa7.04□□□□□ -1.28
COMMD3-213ENST00000483684 SEPHS1P49903 392 aa7.04□□□□□ -1.28
COMMD3-213ENST00000483684 KIAA2012Q0VF49 1180 aa7.04□□□□□ -1.28
COMMD3-213ENST00000483684 SYT3Q9BQG1 590 aa7.04□□□□□ -1.28
COMMD3-213ENST00000483684 PCDH18Q9HCL0 1135 aa7.04□□□□□ -1.28
COMMD3-213ENST00000483684 SRRDQ9UH36 339 aa7.04□□□□□ -1.28
COMMD3-213ENST00000483684 INVSQ9Y283 1065 aa7.04□□□□□ -1.28
COMMD3-213ENST00000483684 SIT1Q9Y3P8 196 aa7.04□□□□□ -1.28
COMMD3-213ENST00000483684 PCDHGB7Q9Y5F8 929 aa7.04□□□□□ -1.28
COMMD3-213ENST00000483684 C7orf72A4D263 438 aa7.03□□□□□ -1.28
COMMD3-213ENST00000483684 SCAMP3O14828 347 aaKnown RBP7.03□□□□□ -1.28
COMMD3-213ENST00000483684 NTRK1P04629 796 aa7.03□□□□□ -1.28
COMMD3-213ENST00000483684 PAMP19021 973 aa7.03□□□□□ -1.28
COMMD3-213ENST00000483684 GRB10Q13322 594 aa7.03□□□□□ -1.28
COMMD3-213ENST00000483684 DPY19L1Q2PZI1 675 aa7.03□□□□□ -1.28
COMMD3-213ENST00000483684 PRR31Q5SQ13 230 aa7.03□□□□□ -1.28
COMMD3-213ENST00000483684 FBXW10Q5XX13 1052 aa7.03□□□□□ -1.28
COMMD3-213ENST00000483684 LGI4Q8N135 537 aa7.03□□□□□ -1.28
COMMD3-213ENST00000483684 ARHGEF39Q8N4T4 335 aa7.03□□□□□ -1.28
COMMD3-213ENST00000483684 KYQ8NBH2 561 aa7.03□□□□□ -1.28
COMMD3-213ENST00000483684 PLEKHO2Q8TD55 490 aa7.03□□□□□ -1.28
COMMD3-213ENST00000483684 CGGBP1Q9UFW8 167 aaPredicted RBP7.03□□□□□ -1.28
COMMD3-213ENST00000483684 TRBV23OR9-2A0A075B6M9 112 aa7.02□□□□□ -1.29
COMMD3-213ENST00000483684 MROH6A6NGR9 719 aa7.02□□□□□ -1.29
COMMD3-213ENST00000483684 FSHBP01225 129 aa7.02□□□□□ -1.29
COMMD3-213ENST00000483684 HEATR6Q6AI08 1181 aaKnown RBP7.02□□□□□ -1.29
COMMD3-213ENST00000483684 MIB1Q86YT6 1006 aa7.02□□□□□ -1.29
COMMD3-213ENST00000483684 DVL3Q92997 716 aaPredicted RBP7.02□□□□□ -1.29
COMMD3-213ENST00000483684 RCC1LQ96I51 464 aaKnown RBP7.02□□□□□ -1.29
COMMD3-213ENST00000483684 SORCS2Q96PQ0 1159 aa7.02□□□□□ -1.29
COMMD3-213ENST00000483684 GBP3Q9H0R5 595 aa7.02□□□□□ -1.29
COMMD3-213ENST00000483684 NPHS1O60500 1241 aa7.01□□□□□ -1.29
COMMD3-213ENST00000483684 EPHX1P07099 455 aa7.01□□□□□ -1.29
COMMD3-213ENST00000483684 AMPD2Q01433 879 aa7.01□□□□□ -1.29
COMMD3-213ENST00000483684 GNPTABQ3T906 1256 aa7.01□□□□□ -1.29
COMMD3-213ENST00000483684 ETV3LQ6ZN32 361 aa7.01□□□□□ -1.29
COMMD3-213ENST00000483684 USP33Q8TEY7 942 aa7.01□□□□□ -1.29
COMMD3-213ENST00000483684 PODXL2Q9NZ53 605 aa7.01□□□□□ -1.29
COMMD3-213ENST00000483684 SLC12A7Q9Y666 1083 aa7.01□□□□□ -1.29
COMMD3-213ENST00000483684 NPHP3-ACAD11A0A0J9YXS1 232 aa7□□□□□ -1.29
COMMD3-213ENST00000483684 SGSM2O43147 1006 aa7□□□□□ -1.29
COMMD3-213ENST00000483684 FUCA1P04066 466 aa7□□□□□ -1.29
COMMD3-213ENST00000483684 RACK1P63244 317 aaKnown RBP7□□□□□ -1.29
COMMD3-213ENST00000483684 RBM10P98175 930 aaKnown RBP7□□□□□ -1.29
COMMD3-213ENST00000483684 C9orf131Q5VYM1 1079 aa7□□□□□ -1.29
COMMD3-213ENST00000483684 DCP2Q8IU60 420 aaKnown RBP7□□□□□ -1.29
COMMD3-213ENST00000483684 Q8N1X5 172 aa7□□□□□ -1.29
COMMD3-213ENST00000483684 FAM26EQ8N5C1 309 aa7□□□□□ -1.29
COMMD3-213ENST00000483684 ZNF513Q8N8E2 541 aaPredicted RBP7□□□□□ -1.29
COMMD3-213ENST00000483684 TXNDC5Q8NBS9 432 aaKnown RBP7□□□□□ -1.29
COMMD3-213ENST00000483684 KLHL6Q8WZ60 621 aa7□□□□□ -1.29
COMMD3-213ENST00000483684 ZNF428Q96B54 188 aa7□□□□□ -1.29
COMMD3-213ENST00000483684 FGD4Q96M96 766 aa7□□□□□ -1.29
COMMD3-213ENST00000483684 PHAXQ9H814 394 aaKnown RBP7□□□□□ -1.29
COMMD3-213ENST00000483684 PPM1BO75688 479 aa6.99□□□□□ -1.29
COMMD3-213ENST00000483684 ITGA1P56199 1179 aa6.99□□□□□ -1.29
COMMD3-213ENST00000483684 CDSNQ15517 529 aa6.99□□□□□ -1.29
COMMD3-213ENST00000483684 MBLAC2Q68D91 279 aa6.99□□□□□ -1.29
COMMD3-213ENST00000483684 MCTP2Q6DN12 878 aa6.99□□□□□ -1.29
COMMD3-213ENST00000483684 BORAQ6PGQ7 559 aa6.99□□□□□ -1.29
COMMD3-213ENST00000483684 ADAT2Q7Z6V5 191 aaKnown RBP6.99□□□□□ -1.29
COMMD3-213ENST00000483684 METTL16Q86W50 562 aaKnown RBP6.99□□□□□ -1.29
COMMD3-213ENST00000483684 TTLL6Q8N841 843 aa6.99□□□□□ -1.29
COMMD3-213ENST00000483684 CHST13Q8NET6 341 aa6.99□□□□□ -1.29
COMMD3-213ENST00000483684 DPF3Q92784 378 aa6.99□□□□□ -1.29
COMMD3-213ENST00000483684 COPS5Q92905 334 aa6.99□□□□□ -1.29
COMMD3-213ENST00000483684 MMP19Q99542 508 aa6.99□□□□□ -1.29
COMMD3-213ENST00000483684 SCAND2PQ9GZW5 306 aaPredicted RBP6.99□□□□□ -1.29
COMMD3-213ENST00000483684 ST6GALNAC2Q9UJ37 374 aa6.99□□□□□ -1.29
COMMD3-213ENST00000483684 DDX41Q9UJV9 622 aaKnown RBP6.99□□□□□ -1.29
COMMD3-213ENST00000483684 A0A1W2PQH9 124 aa6.98□□□□□ -1.29
COMMD3-213ENST00000483684 HDLBPQ00341 1268 aaKnown RBP6.98□□□□□ -1.29
COMMD3-213ENST00000483684 SLC7A5Q01650 507 aa6.98□□□□□ -1.29
COMMD3-213ENST00000483684 COL9A2Q14055 689 aaPredicted RBP6.98□□□□□ -1.29
COMMD3-213ENST00000483684 CCDC81Q6ZN84 652 aa6.98□□□□□ -1.29
COMMD3-213ENST00000483684 LIMS2Q7Z4I7 341 aa6.98□□□□□ -1.29
COMMD3-213ENST00000483684 C19orf47Q8N9M1 422 aaKnown RBP6.98□□□□□ -1.29
COMMD3-213ENST00000483684 PCDHB10Q9UN67 800 aa6.98□□□□□ -1.29
COMMD3-213ENST00000483684 TSC22D4Q9Y3Q8 395 aa6.98□□□□□ -1.29
COMMD3-213ENST00000483684 C6P13671 934 aa6.97□□□□□ -1.29
COMMD3-213ENST00000483684 CD300LDQ6UXZ3 194 aa6.97□□□□□ -1.29
COMMD3-213ENST00000483684 SPRED1Q7Z699 444 aa6.97□□□□□ -1.29
COMMD3-213ENST00000483684 FAM124AQ86V42 546 aa6.97□□□□□ -1.29
COMMD3-213ENST00000483684 C9orf118A6NHY6 69 aa6.96□□□□□ -1.3
COMMD3-213ENST00000483684 B4GALT3O60512 393 aa6.96□□□□□ -1.3
COMMD3-213ENST00000483684 TACR2P21452 398 aa6.96□□□□□ -1.3
COMMD3-213ENST00000483684 ACVRL1P37023 503 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms