RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 PXMP2Q9NR77 195 aa17.97■□□□□ 0.47
RPP40-206ENST00000483546 BARHL2Q9NY43 387 aa17.97■□□□□ 0.47
RPP40-206ENST00000483546 COL20A1Q9P218 1284 aa17.97■□□□□ 0.47
RPP40-206ENST00000483546 TPCN1Q9ULQ1 816 aa17.97■□□□□ 0.47
RPP40-206ENST00000483546 DUSP11O75319 330 aaKnown RBP17.96■□□□□ 0.47
RPP40-206ENST00000483546 FARP2O94887 1054 aaPredicted RBP17.96■□□□□ 0.47
RPP40-206ENST00000483546 NAPAP54920 295 aa17.96■□□□□ 0.47
RPP40-206ENST00000483546 RABEP1Q15276 862 aa17.96■□□□□ 0.47
RPP40-206ENST00000483546 STXBP2Q15833 593 aa17.96■□□□□ 0.47
RPP40-206ENST00000483546 CCDC144BQ3MJ40 725 aa17.96■□□□□ 0.47
RPP40-206ENST00000483546 WWC2Q6AWC2 1192 aa17.96■□□□□ 0.47
RPP40-206ENST00000483546 IQSEC1Q6DN90 963 aa17.96■□□□□ 0.47
RPP40-206ENST00000483546 FAM177A1Q8N128 213 aaPredicted RBP17.96■□□□□ 0.47
RPP40-206ENST00000483546 SMARCC2Q8TAQ2 1214 aa17.96■□□□□ 0.47
RPP40-206ENST00000483546 KIF2CQ99661 725 aa17.96■□□□□ 0.47
RPP40-206ENST00000483546 FRMPD4Q14CM0 1322 aa17.96■□□□□ 0.46
RPP40-206ENST00000483546 BRCA2P51587 3418 aa17.95■□□□□ 0.46
RPP40-206ENST00000483546 hCG_1642624A0A1W2PR95 340 aa17.95■□□□□ 0.46
RPP40-206ENST00000483546 ESYT2A0FGR8 921 aa17.95■□□□□ 0.46
RPP40-206ENST00000483546 DNM1LO00429 736 aa17.95■□□□□ 0.46
RPP40-206ENST00000483546 HOXA13P31271 388 aaPredicted RBP17.95■□□□□ 0.46
RPP40-206ENST00000483546 MLLT1Q03111 559 aaPredicted RBP17.95■□□□□ 0.46
RPP40-206ENST00000483546 UBE2Q1Q7Z7E8 422 aa17.95■□□□□ 0.46
RPP40-206ENST00000483546 GPKOWQ92917 476 aaPredicted RBP eCLIP17.95■□□□□ 0.46
RPP40-206ENST00000483546 BACH2Q9BYV9 841 aa17.95■□□□□ 0.46
RPP40-206ENST00000483546 NCOA5Q9HCD5 579 aaKnown RBP17.95■□□□□ 0.46
RPP40-206ENST00000483546 Q9Y3F1 56 aa17.95■□□□□ 0.46
RPP40-206ENST00000483546 RBM47A0AV96 593 aaKnown RBP17.94■□□□□ 0.46
RPP40-206ENST00000483546 STXBP3O00186 592 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 MEIS2O14770 477 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 EIF3JO75822 258 aaKnown RBP17.94■□□□□ 0.46
RPP40-206ENST00000483546 STAM2O75886 525 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 DEXIO95424 95 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 NR3C2P08235 984 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 TNFAIP2Q03169 654 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 SSRP1Q08945 709 aaKnown RBP17.94■□□□□ 0.46
RPP40-206ENST00000483546 STK3Q13188 491 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 MCTP2Q6DN12 878 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 TAPT1Q6NXT6 567 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 XRRA1Q6P2D8 792 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 NECAB2Q7Z6G3 386 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 FBXO16Q8IX29 292 aaPredicted RBP17.94■□□□□ 0.46
RPP40-206ENST00000483546 CCDC148Q8NFR7 591 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 SCFD2Q8WU76 684 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 PHKBQ93100 1093 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 TBC1D32Q96NH3 1257 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 PDCD2LQ9BRP1 358 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 SLC26A6Q9BXS9 759 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 SPC25Q9HBM1 224 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 RIC8AQ9NPQ8 531 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 XPNPEP3Q9NQH7 507 aa17.94■□□□□ 0.46
RPP40-206ENST00000483546 NKRFO15226 690 aaKnown RBP eCLIP17.93■□□□□ 0.46
RPP40-206ENST00000483546 FOSP01100 380 aaPredicted RBP17.93■□□□□ 0.46
RPP40-206ENST00000483546 EIF2AK2P19525 551 aaKnown RBP17.93■□□□□ 0.46
RPP40-206ENST00000483546 ADCY7P51828 1080 aa17.93■□□□□ 0.46
RPP40-206ENST00000483546 NKX3-2P78367 333 aa17.93■□□□□ 0.46
RPP40-206ENST00000483546 SCRN1Q12765 414 aa17.93■□□□□ 0.46
RPP40-206ENST00000483546 PGM5Q15124 567 aa17.93■□□□□ 0.46
RPP40-206ENST00000483546 PKN1Q16512 942 aa17.93■□□□□ 0.46
RPP40-206ENST00000483546 RNF180Q86T96 592 aa17.93■□□□□ 0.46
RPP40-206ENST00000483546 FCHSD1Q86WN1 690 aa17.93■□□□□ 0.46
RPP40-206ENST00000483546 LARP6Q9BRS8 491 aaKnown RBP17.93■□□□□ 0.46
RPP40-206ENST00000483546 EHMT1Q9H9B1 1298 aa17.93■□□□□ 0.46
RPP40-206ENST00000483546 SH3GLB2Q9NR46 395 aa17.93■□□□□ 0.46
RPP40-206ENST00000483546 LIMCH1Q9UPQ0 1083 aa17.93■□□□□ 0.46
RPP40-206ENST00000483546 STK36Q9NRP7 1315 aa17.93■□□□□ 0.46
RPP40-206ENST00000483546 SPDYE3A6NKU9 549 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 KBTBD13C9JR72 458 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 ST18O60284 1047 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 CST5P28325 142 aaPredicted RBP17.92■□□□□ 0.46
RPP40-206ENST00000483546 GNA11P29992 359 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 CCND2P30279 289 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 ADCYAP1R1P41586 468 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 ME3Q16798 604 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 DUSP28Q4G0W2 176 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 KCNV1Q6PIU1 500 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 USP17L6PQ6QN14 398 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 EEPD1Q7L9B9 569 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 VSIG10LQ86VR7 867 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 GTF3C6Q969F1 213 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 ZSCAN31Q96LW9 406 aaPredicted RBP17.92■□□□□ 0.46
RPP40-206ENST00000483546 TSEN34Q9BSV6 310 aaKnown RBP17.92■□□□□ 0.46
RPP40-206ENST00000483546 HTATIP2Q9BUP3 242 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 ZMYND12Q9H0C1 365 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 UPF3AQ9H1J1 476 aaKnown RBP17.92■□□□□ 0.46
RPP40-206ENST00000483546 C6orf50Q9HD87 102 aa17.92■□□□□ 0.46
RPP40-206ENST00000483546 SMCO2A6NFE2 343 aa17.91■□□□□ 0.46
RPP40-206ENST00000483546 ADAMTS4O75173 837 aa17.91■□□□□ 0.46
RPP40-206ENST00000483546 MNX1P50219 401 aaPredicted RBP17.91■□□□□ 0.46
RPP40-206ENST00000483546 GJA9P57773 515 aa17.91■□□□□ 0.46
RPP40-206ENST00000483546 AP3B2Q13367 1082 aa17.91■□□□□ 0.46
RPP40-206ENST00000483546 TTLL4Q14679 1199 aa17.91■□□□□ 0.46
RPP40-206ENST00000483546 LRRC41Q15345 812 aa17.91■□□□□ 0.46
RPP40-206ENST00000483546 ANO1Q5XXA6 986 aa17.91■□□□□ 0.46
RPP40-206ENST00000483546 TYW1BQ6NUM6 668 aa17.91■□□□□ 0.46
RPP40-206ENST00000483546 BICD2Q8TD16 824 aa17.91■□□□□ 0.46
RPP40-206ENST00000483546 WDR11Q9BZH6 1224 aa17.91■□□□□ 0.46
RPP40-206ENST00000483546 C11orf49Q9H6J7 331 aa17.91■□□□□ 0.46
RPP40-206ENST00000483546 SH2B1Q9NRF2 756 aaPredicted RBP17.91■□□□□ 0.46
RPP40-206ENST00000483546 GNEQ9Y223 722 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms