RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CIITAP33076 1130 aa14.88□□□□□ -0.03
CPNE1-225ENST00000483495 PAK1Q13153 545 aa14.88□□□□□ -0.03
CPNE1-225ENST00000483495 Q4G0T1 1027 aa14.88□□□□□ -0.03
CPNE1-225ENST00000483495 HYIQ5T013 277 aa14.88□□□□□ -0.03
CPNE1-225ENST00000483495 KRT79Q5XKE5 535 aa14.88□□□□□ -0.03
CPNE1-225ENST00000483495 CNNM4Q6P4Q7 775 aa14.88□□□□□ -0.03
CPNE1-225ENST00000483495 APTXQ7Z2E3 356 aaKnown RBP14.88□□□□□ -0.03
CPNE1-225ENST00000483495 SAMD7Q7Z3H4 446 aa14.88□□□□□ -0.03
CPNE1-225ENST00000483495 ADSSL1Q8N142 457 aa14.88□□□□□ -0.03
CPNE1-225ENST00000483495 GIMAP8Q8ND71 665 aaPredicted RBP14.88□□□□□ -0.03
CPNE1-225ENST00000483495 NLGN2Q8NFZ4 835 aa14.88□□□□□ -0.03
CPNE1-225ENST00000483495 GLIS2Q9BZE0 524 aaPredicted RBP14.88□□□□□ -0.03
CPNE1-225ENST00000483495 CTNND2Q9UQB3 1225 aa14.88□□□□□ -0.03
CPNE1-225ENST00000483495 A0A1B0GTH6 734 aa14.87□□□□□ -0.03
CPNE1-225ENST00000483495 SPDYE3A6NKU9 549 aa14.87□□□□□ -0.03
CPNE1-225ENST00000483495 TBX3O15119 743 aa14.87□□□□□ -0.03
CPNE1-225ENST00000483495 CTNND1O60716 968 aaKnown RBP14.87□□□□□ -0.03
CPNE1-225ENST00000483495 CYP3A4P08684 503 aa14.87□□□□□ -0.03
CPNE1-225ENST00000483495 PRCPP42785 496 aa14.87□□□□□ -0.03
CPNE1-225ENST00000483495 STX17P56962 302 aa14.87□□□□□ -0.03
CPNE1-225ENST00000483495 NR1I3Q14994 352 aa14.87□□□□□ -0.03
CPNE1-225ENST00000483495 ARMCX5Q6P1M9 558 aa14.87□□□□□ -0.03
CPNE1-225ENST00000483495 UPF1Q92900 1129 aaKnown RBP eCLIP14.87□□□□□ -0.03
CPNE1-225ENST00000483495 HACL1Q9UJ83 578 aa14.87□□□□□ -0.03
CPNE1-225ENST00000483495 PCDHA12Q9UN75 941 aa14.87□□□□□ -0.03
CPNE1-225ENST00000483495 GDAQ9Y2T3 454 aa14.87□□□□□ -0.03
CPNE1-225ENST00000483495 SKILP12757 684 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 KIF4BQ2VIQ3 1234 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 COBLL1Q53SF7 1204 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 SV2BQ7L1I2 683 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 SLFN12Q8IYM2 578 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 ETNPPLQ8TBG4 499 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 SNX29Q8TEQ0 813 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 NELFBQ8WX92 580 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 LENG9Q96B70 501 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 NUDT12Q9BQG2 462 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 DEFB129Q9H1M3 183 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 GJA3Q9Y6H8 435 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 ZNF541Q9H0D2 1346 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 LRRC10BA6NIK2 292 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 TBC1D10BQ4KMP7 808 aaPredicted RBP14.86□□□□□ -0.03
CPNE1-225ENST00000483495 HSP90AA4PQ58FG1 418 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 LARP4BQ92615 738 aaKnown RBP14.86□□□□□ -0.03
CPNE1-225ENST00000483495 LPAR1Q92633 364 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 RAD54LQ92698 747 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 CCDC47Q96A33 483 aaKnown RBP14.86□□□□□ -0.03
CPNE1-225ENST00000483495 CDK5RAP3Q96JB5 506 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 CTAGE1Q96RT6 745 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 ZNF341Q9BYN7 854 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 KIAA1683Q9H0B3 1180 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 KCND1Q9NSA2 647 aa14.86□□□□□ -0.03
CPNE1-225ENST00000483495 SCAF8Q9UPN6 1271 aaKnown RBP14.86□□□□□ -0.03
CPNE1-225ENST00000483495 ASTN2O75129 1339 aaPredicted RBP14.85□□□□□ -0.03
CPNE1-225ENST00000483495 PSDA5PKW4 1024 aaPredicted RBP14.85□□□□□ -0.03
CPNE1-225ENST00000483495 TAL1P17542 331 aaPredicted RBP14.85□□□□□ -0.03
CPNE1-225ENST00000483495 SFPQP23246 707 aaKnown RBP eCLIP14.85□□□□□ -0.03
CPNE1-225ENST00000483495 TBX2Q13207 712 aaPredicted RBP14.85□□□□□ -0.03
CPNE1-225ENST00000483495 ZYXQ15942 572 aaKnown RBP14.85□□□□□ -0.03
CPNE1-225ENST00000483495 KIFC2Q96AC6 838 aa14.85□□□□□ -0.03
CPNE1-225ENST00000483495 LRRC27Q9C0I9 530 aa14.85□□□□□ -0.03
CPNE1-225ENST00000483495 MRPL11Q9Y3B7 192 aaKnown RBP14.85□□□□□ -0.03
CPNE1-225ENST00000483495 KDM3AQ9Y4C1 1321 aa14.85□□□□□ -0.03
CPNE1-225ENST00000483495 PVALEFA0A1B0GWK0 134 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 WDR46O15213 610 aaKnown RBP14.84□□□□□ -0.03
CPNE1-225ENST00000483495 MARCH6O60337 910 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 HOXA7P31268 230 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-225ENST00000483495 PPP1R2P41236 205 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 KCNJ6P48051 423 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 TERF1P54274 439 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 ASIC1P78348 528 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 STIM1Q13586 685 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 CCDC84Q86UT8 332 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-225ENST00000483495 DHTKD1Q96HY7 919 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-225ENST00000483495 FAM20AQ96MK3 541 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 NT5C3AQ9H0P0 336 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 ADD3Q9UEY8 706 aaKnown RBP14.84□□□□□ -0.03
CPNE1-225ENST00000483495 LIMA1Q9UHB6 759 aaKnown RBP14.84□□□□□ -0.03
CPNE1-225ENST00000483495 ABCB11O95342 1321 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 MYMKA6NI61 221 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 FAM86B1E9PN63 330 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 H7C1D1 291 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 FAM86B2P0C5J1 330 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 HOXA13P31271 388 aaPredicted RBP14.84□□□□□ -0.03
CPNE1-225ENST00000483495 SPAG1Q07617 926 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 SPIRE1Q08AE8 756 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 MCM6Q14566 821 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 ECM1Q16610 540 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 SPECC1LQ69YQ0 1117 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 CCDC174Q6PII3 467 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 GJA10Q969M2 543 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 FEZ1Q99689 392 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 EXOC1Q9NV70 894 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 FBXO28Q9NVF7 368 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 ZNF112Q9UJU3 913 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 ATAD5Q96QE3 1844 aa14.84□□□□□ -0.03
CPNE1-225ENST00000483495 GCOM1H8Y6P7 765 aaPredicted RBP14.83□□□□□ -0.04
CPNE1-225ENST00000483495 PSMA7O14818 248 aa14.83□□□□□ -0.04
CPNE1-225ENST00000483495 POLR2MP0CAP2 368 aa14.83□□□□□ -0.04
CPNE1-225ENST00000483495 INPP5BP32019 993 aa14.83□□□□□ -0.04
CPNE1-225ENST00000483495 PBX1P40424 430 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms