RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 TRPM8Q7Z2W7 1104 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 NUTM2AQ8IVF1 878 aaPredicted RBP8.6□□□□□ -1.03
COL4A5-205ENST00000483338 MREGQ8N565 214 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 TRIM11Q96F44 468 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 CLMNQ96JQ2 1002 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 SRPK1Q96SB4 655 aaKnown RBP8.6□□□□□ -1.03
COL4A5-205ENST00000483338 ETNK2Q9NVF9 386 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 IQSEC3Q9UPP2 1182 aaPredicted RBP8.6□□□□□ -1.03
COL4A5-205ENST00000483338 PLAAQ9Y263 795 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 PTPDC1A2A3K4 754 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 HIP1RO75146 1068 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 UBOX5O94941 541 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 ACADSP16219 412 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 ZNF362Q5T0B9 420 aaPredicted RBP8.59□□□□□ -1.03
COL4A5-205ENST00000483338 TMEM53Q6P2H8 277 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 CYP26C1Q6V0L0 522 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 SPATA4Q8NEY3 305 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 PUS3Q9BZE2 481 aaKnown RBP8.59□□□□□ -1.03
COL4A5-205ENST00000483338 ECT2Q9H8V3 914 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 UBR1Q8IWV7 1749 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 LMTK3Q96Q04 1460 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 SBNO1A3KN83 1393 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 SLIT1O75093 1534 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 MYH1P12882 1939 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 BCRP11274 1271 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 GUCY2FP51841 1108 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 VAV2P52735 878 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 RAD23BP54727 409 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 NLRP6P59044 892 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 ATP11AP98196 1134 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 LSAMPQ13449 338 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 DDB1Q16531 1140 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 ZNF365Q70YC5 407 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 C14orf80Q86SX3 495 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 ANKS4BQ8N8V4 417 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 SLC17A8Q8NDX2 589 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 ENOX1Q8TC92 643 aaKnown RBP8.59□□□□□ -1.03
COL4A5-205ENST00000483338 ZNF653Q96CK0 615 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 CCDC51Q96ER9 411 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 CHMP6Q96FZ7 201 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 HAUS4Q9H6D7 363 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 PHAXQ9H814 394 aaKnown RBP8.59□□□□□ -1.03
COL4A5-205ENST00000483338 JADE2Q9NQC1 790 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 ABHD10Q9NUJ1 306 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 SCOCQ9UIL1 159 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 CPSF1Q10570 1443 aaKnown RBP8.59□□□□□ -1.03
COL4A5-205ENST00000483338 PTPRUQ92729 1446 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 ACEP12821 1306 aa8.59□□□□□ -1.03
COL4A5-205ENST00000483338 YEATS4O95619 227 aa8.59□□□□□ -1.04
COL4A5-205ENST00000483338 CYP1A1P04798 512 aaPredicted RBP8.59□□□□□ -1.04
COL4A5-205ENST00000483338 CDC25AP30304 524 aa8.59□□□□□ -1.04
COL4A5-205ENST00000483338 CCT4P50991 539 aaKnown RBP8.59□□□□□ -1.04
COL4A5-205ENST00000483338 SLC9C2Q5TAH2 1124 aa8.59□□□□□ -1.04
COL4A5-205ENST00000483338 IRGCQ6NXR0 463 aa8.59□□□□□ -1.04
COL4A5-205ENST00000483338 G2E3Q7L622 706 aa8.59□□□□□ -1.04
COL4A5-205ENST00000483338 SAMD3Q8N6K7 520 aa8.59□□□□□ -1.04
COL4A5-205ENST00000483338 ABTB2Q8N961 1025 aa8.59□□□□□ -1.04
COL4A5-205ENST00000483338 SNRNP27Q8WVK2 155 aaKnown RBP8.59□□□□□ -1.04
COL4A5-205ENST00000483338 FAM227BQ96M60 508 aa8.59□□□□□ -1.04
COL4A5-205ENST00000483338 NR1H4Q96RI1 486 aaPredicted RBP8.59□□□□□ -1.04
COL4A5-205ENST00000483338 CHP1Q99653 195 aa8.59□□□□□ -1.04
COL4A5-205ENST00000483338 POLR3CQ9BUI4 534 aaPredicted RBP8.59□□□□□ -1.04
COL4A5-205ENST00000483338 POLR3EQ9NVU0 708 aa8.59□□□□□ -1.04
COL4A5-205ENST00000483338 RMND1Q9NWS8 449 aa8.59□□□□□ -1.04
COL4A5-205ENST00000483338 SMARCAL1Q9NZC9 954 aa8.59□□□□□ -1.04
COL4A5-205ENST00000483338 RABL2BQ9UNT1 228 aa8.59□□□□□ -1.04
COL4A5-205ENST00000483338 CDC42BPGQ6DT37 1551 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 A0A0J9YVX5 310 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ESYT3A0FGR9 886 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ZSCAN5CA6NGD5 496 aaPredicted RBP8.58□□□□□ -1.04
COL4A5-205ENST00000483338 FOXN1O15353 648 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 NDUFA10O95299 355 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 POLR3DP05423 398 aaPredicted RBP8.58□□□□□ -1.04
COL4A5-205ENST00000483338 IDO1P14902 403 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 PPP2R2AP63151 447 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 LACTBP83111 547 aaPredicted RBP8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ITIH4Q14624 930 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 PLS1Q14651 629 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 CCDC122Q5T0U0 273 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ZNF572Q7Z3I7 529 aaPredicted RBP8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ZNF554Q86TJ5 538 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 TRIM50Q86XT4 487 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 CCDC65Q8IXS2 484 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 WDR60Q8WVS4 1066 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 AGBL1Q96MI9 1066 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 HAPLN3Q96S86 360 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 TIPINQ9BVW5 301 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ARHGEF3Q9NR81 526 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ITM2BQ9Y287 266 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 EPN1Q9Y6I3 576 aaPredicted RBP8.58□□□□□ -1.04
COL4A5-205ENST00000483338 SLC4A7Q9Y6M7 1214 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 GOLGA6L10A0A0M3HER8 536 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 P4HA2O15460 535 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 IDEP14735 1019 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 NLRP5P59047 1200 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 HERVK_113P62684 666 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ITIH3Q06033 890 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 SULT2A1Q06520 285 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 ZNF827Q17R98 1081 aa8.58□□□□□ -1.04
COL4A5-205ENST00000483338 MAP7D1Q3KQU3 841 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms